LOCUS       NM_001162538            2584 bp    mRNA    linear   ROD 05-FEB-2024
DEFINITION  Mus musculus outer dense fiber of sperm tails 2-like (Odf2l),
            transcript variant 1, mRNA.
ACCESSION   NM_001162538
VERSION     NM_001162538.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   de Saram,P., Iqbal,A., Murdoch,J.N. and Wilkinson,C.J.
  TITLE     BCAP is a centriolar satellite protein and inhibitor of
            ciliogenesis
  JOURNAL   J Cell Sci 130 (19), 3360-3373 (2017)
   PUBMED   28775150
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB621104.1, AK016726.1, BQ177203.1 and AC152400.9.
            
            [WARNING] On Mar 30, 2024 this sequence was replaced by
            NM_001162538.2.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016726.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                BB621104.1         3-21
            20-2117             AK016726.1         2-2099
            2118-2564           BQ177203.1         17-463              c
            2565-2584           AC152400.9         51180-51199         c
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 69.36 cM"
     gene            1..2584
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /note="outer dense fiber of sperm tails 2-like"
                     /db_xref="GeneID:52184"
                     /db_xref="MGI:MGI:1098600"
     exon            1..194
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            195..359
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     CDS             253..2181
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /note="isoform 1 is encoded by transcript variant 1; outer
                     dense fiber protein 2-like; basal body
                     centriole-associated protein; protein BCAP"
                     /codon_start=1
                     /product="protein BCAP isoform 1"
                     /protein_id="NP_001156010.1"
                     /db_xref="CCDS:CCDS51087.1"
                     /db_xref="GeneID:52184"
                     /db_xref="MGI:MGI:1098600"
                     /translation="MEMPTSDGSLSEGLISYLIRERGSAPQCAPEKHLSRLKQDVANT
                     KMELKATLKEAQLASCSVELLLPLFKNTVEGISLENANLSASSLKKIFEQNDILSKEL
                     DTFNRVKLALEHLIKQTDYEQIGDSLLCLLKDLSDNESENRNLEEKVLEKETYIRELS
                     CLFQNEKESALKANRLSQSVKVVHDRLQRQIQKREAENEKLKEHVQSLETQIAKWNLQ
                     VKMNKQEAVAIKEASRQKAVALKKASKVYRQRLRHFTGDIERLASQVRDQEAKLSETV
                     SASSDWKSQFEKIAIEKTELEVQIETMKKQIANLLEDLRKMETHGKNSCEEILRKLHS
                     LEDENEALNIENVKLKGTLDALKDEVASVENELVELQEVEKRQKTLVEGYRTQVQKLQ
                     EAAEMVKSRCKNLLHENNLIITNKNKKLEKMRGQVESNLKQVEQARSSFTSAEQRLQE
                     CQEKLQRCKEKCAEQALTIRELQGQVDGNQSLLTKLSLEEENHLIQLKCENLKEKLEQ
                     MDAENKELEKKLADQEECLKHSDLELKEKAAEYTALSRQLEAALEEGRQKVSEEVEKM
                     SSRERALQIKILDLEAELRKKNEEQNQLVDKMNTKTQHQAICLKEIQHSLEKSETRNE
                     SIKNYLQFLQISYVTMFR"
     exon            360..492
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            493..621
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            622..681
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            682..753
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            754..870
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            871..1056
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1166
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1302
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1413
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1414..1518
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1677
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1678..1763
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1764..1926
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            1927..2052
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
     exon            2053..2584
                     /gene="Odf2l"
                     /gene_synonym="4733401D09Rik; 9630045K08Rik; D3Ertd250e"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaccgcagg ccggttacta gcaacgttga gctccaaggt ggacgcgctc aggccgccgc
       61 tgcctgttct ggtgactcgt cagcttctct ccccgcgctc cctgcccttc cctctggcct
      121 cctactctct ctgcactctc cgcctgctgc agtgacccag ggccgggcag gcctcagaga
      181 ggcctccggc cattctttca gtgtctgtgg aaaagttgtt gctgaagtgc ctgtaaaaga
      241 gtcactgagt tgatggagat gcctactagt gatggaagtc tttcagaggg cctgatttct
      301 tatctcatcc gggagagagg atctgctcca cagtgtgccc ctgagaagca cctcagcagg
      361 ctcaagcaag acgtcgcaaa tacaaagatg gagttgaaag caacgcttaa ggaagctcag
      421 ttggcatcct gttcagttga attacttttg ccattattta agaacactgt ggaaggaatt
      481 agtctagaaa acgctaatct ttctgcatcc agtttgaaga agatttttga acagaacgac
      541 atattatcaa aagaattaga cacttttaac cgtgtgaaat tagccttaga acatcttatt
      601 aaacagactg actatgaaca aataggagac agcttgctat gcttgttgaa ggatctcagt
      661 gacaatgaaa gtgagaacag aaaccttgag gaaaaagtac ttgaaaagga gacctatatc
      721 cgtgaactct cgtgtctgtt tcagaatgaa aaggaaagtg ctttgaaagc aaacaggctt
      781 tctcaatcag tcaaagtagt gcacgatcgt ctacagcgcc aaattcagaa gagggaagct
      841 gagaatgaaa agctaaaaga acatgtacag agcttggaaa cccaaatagc caagtggaac
      901 ttgcaggtga aaatgaataa gcaagaggct gtagccatca aggaagcaag tcggcaaaag
      961 gctgtagctc tgaaaaaagc atcgaaagtg tacagacaaa ggctgcgaca cttcacaggg
     1021 gatatcgagc gcctcgcctc ccaagtcaga gatcaggaag ccaagctgtc tgaaacagtt
     1081 tcagcttcca gtgactggaa aagtcagttc gagaaaattg ccatagaaaa aactgagctg
     1141 gaagtgcaga tcgaaacaat gaaaaagcaa atcgctaacc ttttggaaga cttgagaaaa
     1201 atggaaactc atgggaaaaa ctcatgtgaa gaaattctta gaaaacttca ctcactggaa
     1261 gatgaaaatg aagccctaaa tattgagaat gtgaaattaa agggtacact tgatgccttg
     1321 aaggatgaag ttgcttctgt tgaaaatgaa cttgtagaac tgcaagaagt agaaaaacga
     1381 caaaaaaccc tcgtcgaagg atacaggact caggtacaaa agttgcaaga agcagctgaa
     1441 atggtgaaaa gtagatgcaa aaatttacta catgaaaata acctaataat aacgaataaa
     1501 aacaaaaagt tagagaagat gagaggccag gtggagtcga atctgaagca ggtagagcaa
     1561 gcccgcagct ccttcacgtc agccgaacag agacttcagg agtgtcagga gaagctgcag
     1621 cgctgcaagg agaagtgtgc agagcaggcg ctcaccatta gggagcttca aggccaggtt
     1681 gatggaaacc aaagccttct gaccaagctt tctcttgagg aagaaaatca tctcattcag
     1741 ttaaagtgtg agaaccttaa agagaaacta gagcagatgg atgcagagaa taaagagctt
     1801 gagaagaagc tggccgacca agaggagtgt ctcaagcaca gtgacctgga gctgaaagag
     1861 aaggctgcag agtacacagc cctgtccagg caactggaag ccgctttgga agaaggaaga
     1921 caaaaggttt cagaagaagt agagaaaatg tcatctagag agagggcttt acaaattaaa
     1981 atattagatc tggaagctga gcttagaaag aaaaatgaag aacaaaacca acttgttgac
     2041 aagatgaaca ctaaaaccca gcaccaggct atctgcttga aggaaataca gcacagcctt
     2101 gagaagtcgg agactcggaa tgagagcatt aagaattact tgcagtttct tcaaatttcc
     2161 tatgtaacga tgtttagata aattgttgat tttctctgat tgttatgctt tgtaatttat
     2221 aggttagcag tattagaatt tctatgtgaa gatacttgaa acataattta ttatctaatt
     2281 gaactttaag gaatagtagc tcttactatt cttttgtggt agataatttg cattgaagtc
     2341 tagtttaatt ctttttaaaa atatattaat ttttaaaata tttttcacca tatatgcaaa
     2401 aatcagaatt attcttatga accattgaag taaatttgta acaaatctag accgattatg
     2461 agccaaatac atagatttaa ataatgtatt tactttaaat aatgtattta cttgttttat
     2521 attataatgc tataccaata aaatattcag aaatttaatt ttaataacag tataagtttt
     2581 aaag
//
