LOCUS       XM_017316299            3863 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus outer dense fiber of sperm tails 2 (Odf2),
            transcript variant X18, mRNA.
ACCESSION   XM_017316299
VERSION     XM_017316299.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017316299.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3863
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3863
                     /gene="Odf2"
                     /gene_synonym="MMTEST29"
                     /note="outer dense fiber of sperm tails 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 46 ESTs, 749 long SRA reads, 3 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18286"
                     /db_xref="MGI:MGI:1098824"
     CDS             343..2778
                     /gene="Odf2"
                     /gene_synonym="MMTEST29"
                     /codon_start=1
                     /product="outer dense fiber protein 2 isoform X11"
                     /protein_id="XP_017171788.1"
                     /db_xref="GeneID:18286"
                     /db_xref="MGI:MGI:1098824"
                     /translation="MSASSSGGSPRFPSCGKNGVTSLTQKKVLRTPCGAPSVTVTKSH
                     KRGMKGDTVNVRRSVRVKTKNPPHCLEITPPSSEKLVSVMRLSDLSTEDDDSGHCKMN
                     RYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVL
                     RHNIERIKEEKDFTMLQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKT
                     EKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQQGTLLK
                     RLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQL
                     RCKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKETLKKAIRAQKE
                     RAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKDKGDLELEIIVLNDRV
                     TDLVNQQQSLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHL
                     EVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKMLKDEMNKEIEAA
                     RRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGD
                     KLEMAREKHQASQKENKQLSQKVDELERKLEATSAQNVEFLQVIAKREEAIHQAQLRL
                     EEKTRECGSLARQLESAIEDARRQVEQTKEQALSKERAAQSKILDLETQLSRTKTELG
                     QLRRTRDDADRRYQSRLQDLKDRLEQSESTNRSMQNYVQFLKASYANVFGDAPYTSSY
                     LTSSPIRSRSPPA"
ORIGIN      
        1 cttcctcctc ccgctaacgg gcgggccggc cgcctccgtc ctctccgggc catcggcagc
       61 gctctttccc tcctctgctg tcctcgggca gggctgcgcc cttctatggg cagaaccccg
      121 tcccctcttg cccgctggac agttgctgtg cgacttggac agtagaggag cgcctcccaa
      181 gttttcatcc aactgccacc cccaaagctt ccaccctcct cccctcagag agaggacgtt
      241 tgatgcccgg cccctgagat tctcattggc cagcccctct gggtccccct gagcagagcc
      301 tgccgaccca attgcccatc tttgcggctt tgatgcttaa ccatgtctgc ctcatcctca
      361 ggcggctccc ccaggtttcc atcgtgtggg aagaacggag taacgagtct cacacagaaa
      421 aaagtcttga gaacaccttg tggcgcaccc agtgtaactg ttacgaaatc tcataagcgc
      481 ggaatgaaag gggacaccgt gaatgtacgg cggagtgtcc gggtgaaaac caagaatcca
      541 cctcattgcc tggagatcac accaccatct tcagaaaagc tggtctcggt gatgcgatta
      601 agtgaccttt ctacagaaga cgacgattca ggtcactgta aaatgaaccg ttacgataag
      661 aagattgaca gtctaatgaa cgcggtcggt tgtctcaaat ctgaggtcaa gatgcagaaa
      721 ggtgaacgcc aaatggccaa aaggttcctg gaggagagga aggaagagct ggaggaggtg
      781 gcacacgagc ttgcagagac ggagcatgag aacacggtgc tcagacacaa catcgagcgt
      841 atcaaggagg agaaggactt caccatgctt caaaagaaac acctccagca ggagaaggaa
      901 tgcctcatgt ccaaactagt ggaggctgaa atggatggag cagctgctgc caagcaggtc
      961 atggccttga aggataccat cgggaagctg aaaaccgaga aacagatgac ttgcaccgac
     1021 atcaacacct taacaaggca gaaggaactt ctcctgcaga agctgagtac ctttgaggag
     1081 accaatcgca ccctccgaga tctgttgagg gaacagcact gcaaagagga ttccgagaga
     1141 ctaatggagc aacaaggtac attactgaag cgtctggcag aggcagactc agagaaagcg
     1201 cgcctgctgt tactactgca agacaaggac aaggaggtgg aagaactcct ccaggagata
     1261 caatgtgaaa aggctcaagc aaagacagcg tctgagcttt ccaagtccat ggagtccatg
     1321 cgggggcatt tgcaggcaca gcttcgctgc aaagaggctg agaacagtcg cctgtgcatg
     1381 cagatcaaga acttagagcg cagtgggaac cagcataagg cggaagtaga ggccatcatg
     1441 gagcagctaa aggaactgaa gcagaaggga gaccgagaca aagagaccct aaagaaggcc
     1501 atccgagccc agaaagagcg agccgagaag agtgaggagt atgccgagca gctgcatgtg
     1561 caactggccg acaaggacct ttatgttgct gaagctttat ctactctgga gtcttggagg
     1621 agccgttaca accaggttgt gaaggacaaa ggagatcttg agttggagat tatcgtccta
     1681 aatgaccggg tgacagatct tgtaaaccaa caacaaagct tggaggagaa gatgcgggaa
     1741 gaccgggaca gcttggtaga gaggctgcac cggcagacgg ctgagtactc tgcattcaag
     1801 ctagagaacg agaggctcaa ggctagcttt gcccctatgg aggacaagct caaccaggct
     1861 cacttggagg ttcagcagct gaaggcgtca gtgaagaact acgaggggat gatagacaac
     1921 tacaagagcc aggtgatgaa aacaagattg gaggctgatg aagtggctgc acagctagag
     1981 cgctgcgaca aagagaacaa gatgcttaaa gacgagatga acaaagagat cgaggcggcc
     2041 cgtcggcagt tccagtcaca gctggctgac ctacaacagc tgcctgacat cctcaagatc
     2101 acggaggcca agctggctga gtgccaagac cagctgcagg gctacgagag gaagaacatc
     2161 gacctcacag ccatcatttc agacctgcgc agccggatcg aacatcaggg ggacaagctg
     2221 gagatggcga gagagaaaca tcaggcttcc cagaaggaaa ataaacagct gagtcagaag
     2281 gtggatgaac ttgagaggaa actggaggct accagcgccc agaatgtcga gttcctacag
     2341 gtgattgcca agagggagga ggcaatccac caggctcagc tgcggttgga ggagaaaacg
     2401 agggagtgtg ggtcattggc gaggcagttg gagagtgcca ttgaagatgc caggcgacag
     2461 gtggagcaaa ccaaggaaca ggcactctcc aaggaacgag cagcccagag caaaatcctg
     2521 gaccttgaga ctcagctgag caggaccaag acagaacttg gccagctgcg gcggactcgt
     2581 gatgatgcgg atcgcagata ccagagccgc ctgcaggatc tgaaagatcg cctggagcag
     2641 tctgagagta ccaaccgcag catgcagaat tatgtccaat tcctcaaggc ctcttatgca
     2701 aatgtgtttg gggatgctcc ctatacatcc tcctacctga cgagctcacc catccgctcc
     2761 cgatcgcccc ctgcctgagg ccacctgtcc agggtgtgat gcccgtgcct gacgccagac
     2821 aactgtggag ttagcaaacc atagctggca agcccactcg ttttcaaatg tgctcagggt
     2881 ctgttcctcc actaatgcca ggaaggctcc tagagcagcc agggatgagt caggaacaat
     2941 ctggttatct ttcctgacct gggaacctgg tggaattctc taatcctcac agccgtgcat
     3001 ttgccacatt aggtaccaga ttttgaaatc cctggaactt tacatacaga gtctgcttcc
     3061 tttcctcagg gaatgtttgg acggactgtt ccatgcagac tccttccagc cctcctcttt
     3121 ccaggcatct ctctcttggg gttttttgag ctaaagttgc aggaatcctt ctccactgaa
     3181 tgcctacatt gccttttctt tcctttttat ttatttattt tttattttat ttttttaata
     3241 aaaatagaac tttatttgta tcaagaaata gtgaaaacag gtaaattagt atctgaggta
     3301 aattagtcag ggctcatgga gatgagatgt tcacggctcc cttgctcctg tggaatctgt
     3361 agctacgaat gtcatgaaaa taaatacatt gtttgcgtcc ctcattacat agcaactggc
     3421 atagtcccag ctacagcagg tgtgttcaca atgaactgtt tggacacaga cctaacagtg
     3481 gcaagtgtgc ttgtaaccat gtggtctggt ttcacagttc tgggaactgc aactcccagc
     3541 ctcttactcc aggaacaata cccaacggtg tcatccttgc gcaggggcca tggtgatctg
     3601 tattgttcca gctgtagtgg atgctctgct gaaggggagt cagcttttct cctcctggtg
     3661 ggtcctgcag gaagcagtgt tctccttggt gcccggggaa acctcccatg tctgtttcct
     3721 ataggccact tgttcctcac gaccatccgg cctgacaatc agaattccta tctcattgct
     3781 tgtcagttct ctttgtatct ctgggattcc tttatttttg aaatttttgt gtggttttac
     3841 aggaaataaa gtttgtatca cta
//
