LOCUS       NM_008757               1107 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus outer dense fiber of sperm tails 1 (Odf1), mRNA.
ACCESSION   NM_008757
VERSION     NM_008757.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   He,X., Mu,W., Wang,Z., Xu,K., Yin,Y., Lu,G., Chan,W.Y., Liu,H.,
            Lv,Y. and Liu,S.
  TITLE     Deficiency of the Tmem232 Gene Causes Male Infertility with
            Morphological Abnormalities of the Sperm Flagellum in Mice
  JOURNAL   Cells 12 (12), 1614 (2023)
   PUBMED   37371084
  REMARK    GeneRIF: Deficiency of the Tmem232 Gene Causes Male Infertility
            with Morphological Abnormalities of the Sperm Flagellum in Mice.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1107)
  AUTHORS   Uchida,A., Imaimatsu,K., Suzuki,H., Han,X., Ushioda,H., Uemura,M.,
            Imura-Kishi,K., Hiramatsu,R., Takase,H.M., Hirate,Y., Ogura,A.,
            Kanai-Azuma,M., Kudo,A. and Kanai,Y.
  TITLE     SOX17-positive rete testis epithelium is required for Sertoli valve
            formation and normal spermiogenesis in the male mouse
  JOURNAL   Nat Commun 13 (1), 7860 (2022)
   PUBMED   36543770
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1107)
  AUTHORS   Hoyer-Fender,S.
  TITLE     Development of the Connecting Piece in ODF1-Deficient Mouse
            Spermatids
  JOURNAL   Int J Mol Sci 23 (18), 10280 (2022)
   PUBMED   36142191
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1107)
  AUTHORS   Tapia Contreras,C. and Hoyer-Fender,S.
  TITLE     The WD40-protein CFAP52/WDR16 is a centrosome/basal body protein
            and localizes to the manchette and the flagellum in male germ cells
  JOURNAL   Sci Rep 10 (1), 14240 (2020)
   PUBMED   32859975
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1107)
  AUTHORS   Bhullar,B., Zhang,Y., Junco,A., Oko,R. and van der Hoorn,F.A.
  TITLE     Association of kinesin light chain with outer dense fibers in a
            microtubule-independent fashion
  JOURNAL   J Biol Chem 278 (18), 16159-16168 (2003)
   PUBMED   12594206
  REMARK    GeneRIF: Association of kinesin light chain with outer dense fibers
            in a microtubule-independent fashion.
REFERENCE   7  (bases 1 to 1107)
  AUTHORS   Nakamura,Y., Tanaka,H., Koga,M., Miyagawa,Y., Iguchi,N., Egydio de
            Carvalho,C., Yomogida,K., Nozaki,M., Nojima,H., Matsumiya,K.,
            Okuyama,A. and Nishimune,Y.
  TITLE     Molecular cloning and characterization of oppo 1: a haploid germ
            cell-specific complementary DNA encoding sperm tail protein
  JOURNAL   Biol Reprod 67 (1), 1-7 (2002)
   PUBMED   12079992
REFERENCE   8  (bases 1 to 1107)
  AUTHORS   Deng,W. and Lin,H.
  TITLE     miwi, a murine homolog of piwi, encodes a cytoplasmic protein
            essential for spermatogenesis
  JOURNAL   Dev Cell 2 (6), 819-830 (2002)
   PUBMED   12062093
REFERENCE   9  (bases 1 to 1107)
  AUTHORS   Matsui,M., Ichihara,H., Kobayashi,S., Tanaka,H., Tsuchida,J.,
            Nozaki,M., Yoshimura,Y., Nojima,H., Rochelle,J.M., Nishimune,Y.,
            Taketo,M.M. and Seldin,M.F.
  TITLE     Mapping of six germ-cell-specific genes to mouse chromosomes
  JOURNAL   Mamm Genome 8 (11), 873-874 (1997)
   PUBMED   9337410
REFERENCE   10 (bases 1 to 1107)
  AUTHORS   Hoyer-Fender,S., Burfeind,P. and Hameister,H.
  TITLE     Sequence of mouse Odf1 cDNA and its chromosomal localization:
            extension of the linkage group between human chromosome 8 and mouse
            chromosome 15
  JOURNAL   Cytogenet Cell Genet 70 (3-4), 200-204 (1995)
   PUBMED   7789171
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC145758.1, CJ042343.1 and BX632868.1.
            
            On Oct 17, 2007 this sequence version replaced NM_008757.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU791469.1, X79446.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-538               BC145758.1         1-538
            539-539             CJ042343.1         428-428
            540-990             BC145758.1         540-990
            991-1107            BX632868.1         1-117               c
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 15.14 cM"
     gene            1..1107
                     /gene="Odf1"
                     /note="outer dense fiber of sperm tails 1"
                     /db_xref="GeneID:18285"
                     /db_xref="MGI:MGI:97424"
     exon            1..505
                     /gene="Odf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             228..974
                     /gene="Odf1"
                     /codon_start=1
                     /product="outer dense fiber protein 1"
                     /protein_id="NP_032783.2"
                     /db_xref="CCDS:CCDS49596.1"
                     /db_xref="GeneID:18285"
                     /db_xref="MGI:MGI:97424"
                     /translation="MAALSCLLDSVRRDIKKVDRELRQLRCIDEISSRCLCDLYMHPY
                     CCCDLHPYPYCLCYSKRSRSCGLCDLYYPCCLCDYKLYCLRPSLRSLERLRRTTNRIL
                     ASSCCSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKE
                     FSLPPCVDEKDVTYSYGLGSCVKIESPCYPCTSPCNPCNPCSPCSPCAPCGPCGPCGP
                     CGPCGPCGPCDPCNPCYPCGSRFSCRKMIL"
     exon            506..1105
                     /gene="Odf1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1087..1092
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Odf1"
                     /note="hexamer: AATACA"
     polyA_site      1105
                     /gene="Odf1"
                     /note="major polyA site"
ORIGIN      
        1 ctgaggaggg tctcagggga ccataactgt ttgtggttgg catggtaacc aagagactat
       61 gacatactta aagggtgggt gaggtcacag aacacaagct ttaaagtaag tgaatcatgt
      121 gtggctcatt taattttaaa ggaggcctct gagaagagct tagaacaatt ttttcctctg
      181 agtgccattt cccaaaggta ctcacagaac aataaggtgt gaccataatg gccgcactga
      241 gttgtctttt ggacagtgtt aggagggaca taaagaaggt ggacagagaa ttaagacaat
      301 tgagatgtat cgacgaaatc agctcccgct gcctgtgtga cttatacatg cacccgtact
      361 gctgctgcga cctgcatccc tatccctact gcctctgcta ctccaagcga tcccgctcct
      421 gtggcctgtg tgacctctac tacccgtgct gcctgtgtga ctacaagctg tactgccttc
      481 gcccatcgct ccgcagttta gagagactca gaaggacgac aaatagaatt ctggcctcgt
      541 cttgctgcag cagtaacata ctgggatcgg tgaatgtgtg cggctttgaa cctgatcaag
      601 tcaaagtgcg cgtgaaagat gggaaggtct gcgtgtcggc cgagagggaa aacaggtacg
      661 actgcctcgg atccaaaaag tacagttaca tgaacatctg caaagagttc agtctgccgc
      721 catgtgtgga tgagaaggac gtgacgtact cctacgggct cggcagctgt gtcaagatcg
      781 agtctccatg ttacccttgc acgtctccct gtaatccttg caacccatgt agcccctgca
      841 gcccctgtgc cccctgcggc ccttgcggcc cctgtggccc ctgtggcccc tgtggtccct
      901 gcggcccctg cgacccttgc aacccctgct atccctgtgg aagccgattc tcctgtagga
      961 agatgatctt ataaggtgta tgtaagaact tatgtcttag cagaagtcag tactccagcc
     1021 aggcagctct tcagcatttc tcgtcccctt cccagagccc gtgtagttcc agtgtgtagg
     1081 aaacttaata cagaattgca tctgaaa
//
