LOCUS       NM_001161430            2455 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus nuclear transport factor 2-like export factor 2
            (Nxt2), transcript variant 2, mRNA.
ACCESSION   NM_001161430
VERSION     NM_001161430.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Hu,J., Wang,H., He,D., Yang,R., Yang,D., Li,D., Wei,S., Fan,X.,
            Mao,X., Lyu,Y. and Li,Y.
  TITLE     Genetic characterization of nuclear export factor NXT1 and its
            paralog NXT2 in primates and murine rodents
  JOURNAL   Zoology (Jena) 151, 126002 (2022)
   PUBMED   35219094
  REMARK    GeneRIF: Genetic characterization of nuclear export factor NXT1 and
            its paralog NXT2 in primates and murine rodents.
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Khan,M., Jabeen,N., Khan,T., Hussain,H.M.J., Ali,A., Khan,R.,
            Jiang,L., Li,T., Tao,Q., Zhang,X., Yin,H., Yu,C., Jiang,X. and
            Shi,Q.
  TITLE     The evolutionarily conserved genes: Tex37, Ccdc73, Prss55 and Nxt2
            are dispensable for fertility in mice
  JOURNAL   Sci Rep 8 (1), 4975 (2018)
   PUBMED   29563520
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2455)
  AUTHORS   Lai,D., Sakkas,D. and Huang,Y.
  TITLE     The fragile X mental retardation protein interacts with a distinct
            mRNA nuclear export factor NXF2
  JOURNAL   RNA 12 (8), 1446-1449 (2006)
   PUBMED   16790844
REFERENCE   4  (bases 1 to 2455)
  AUTHORS   Sasaki,M., Takeda,E., Takano,K., Yomogida,K., Katahira,J. and
            Yoneda,Y.
  TITLE     Molecular cloning and functional characterization of mouse Nxf
            family gene products
  JOURNAL   Genomics 85 (5), 641-653 (2005)
   PUBMED   15820316
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB857403.1, BC068166.1 and BB038253.1.
            
            On Mar 14, 2014 this sequence version replaced NM_001161430.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR,
            compared to variant 1. Variants 1 and 2 encode the same isoform
            (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.219823.1, CA482101.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                BB857403.1         2-99
            99-2447             BC068166.1         89-2437
            2448-2455           BB038253.1         274-281
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 63.02 cM"
     gene            1..2455
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /note="nuclear transport factor 2-like export factor 2"
                     /db_xref="GeneID:237082"
                     /db_xref="MGI:MGI:2147914"
     exon            1..77
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /inference="alignment:Splign:2.1.0"
     exon            78..168
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..582
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /note="isoform a is encoded by transcript variant 2;
                     NTF2-related export protein 2"
                     /codon_start=1
                     /product="NTF2-related export protein 2 isoform a"
                     /protein_id="NP_001154902.1"
                     /db_xref="CCDS:CCDS41155.1"
                     /db_xref="GeneID:237082"
                     /db_xref="MGI:MGI:2147914"
                     /translation="MALAVNFKTYVDQACRAAEEFVNIYYETMDKRRHALVRLYLDKA
                     TLIWNGNVVTGLEALANFFEMLPSSEFQINMLDCQPVHEQATQCQTTVLVVTSGVVKF
                     DGNKQHFFNQNFLLTAQSTPNSTVWKIASDCFRFQDWASI"
     exon            169..255
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /inference="alignment:Splign:2.1.0"
     exon            256..400
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /inference="alignment:Splign:2.1.0"
     exon            401..2455
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2421..2426
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /note="hexamer: AATAAA"
     regulatory      2426..2431
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /note="hexamer: AATAAA"
     polyA_site      2444
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
     polyA_site      2447
                     /gene="Nxt2"
                     /gene_synonym="6330587F24Rik; P15-2"
                     /note="major polyA site"
ORIGIN      
        1 aatattaact tgtgccagga caggtagctg ggaacttgag atgtatttgt tttccatatt
       61 aagcttacaa aagcaagcca aaggacccag acgagcgcgg aagtgcggac atctccgggg
      121 ccagctctgg agcagaccat ttccagcccc ctgatggcct tggcagtgaa ttttaaaact
      181 tatgtggatc aggcatgtag agctgccgag gaatttgtca atatttacta tgagacaatg
      241 gacaaaagac gacatgcact tgtcaggctg tatttggaca aagccactct aatctggaat
      301 ggaaatgttg ttacagggct ggaagccctt gctaattttt ttgagatgtt gccttccagc
      361 gaattccaga tcaatatgtt agattgccaa ccagttcatg agcaagctac ccagtgccaa
      421 actacagtgc tcgttgtgac cagtggagtt gtgaagtttg atggaaacaa gcagcacttc
      481 tttaaccaga acttcctgct gactgcgcag agcactccta acagcactgt gtggaagatt
      541 gcaagtgatt gcttccgttt tcaagattgg gctagtattt aaaggagcaa aaacccactc
      601 tattggtcca ttagttccag caagagaagt tagaggagaa ttaatatatt tcgtgcaaaa
      661 gtactacaaa cttaagtgta tgtgctaaaa ctaaatgtat gtaacatttt ttttttagca
      721 gcgcctttgc tagatcagct gccagtttgg attattgccc ttaagagctt taaagatagt
      781 tttttttaca tgccttatgc atacattcca ctactgacac tctcaaggta atattaaaca
      841 tgatctaggt actaagatat tcactgtgaa cccgatctat tgcacaaatg gagtcctttt
      901 gtattactct ctatgggata gcacaagata gctctgtagg atagtctcag ttactagggt
      961 aatttctcaa tgaagcacat gcctgtttac gattaacact aaagttttaa tatataagta
     1021 tttgaagtct gttcaactta gttttacgct agtgttctga catattttaa ttgcatataa
     1081 ctgtataata gtccgtgttg ttttcttgca ttgacatgtt tccttttgaa atgaggtaat
     1141 caattaggtg gggaaaaaaa tgttctcgac tgatacttgt atatcgggtg catttaatgg
     1201 cagtcacaac tctgaaacct tttgttcgtg ccggcttcag gtcaatgtgt ttatgtgata
     1261 aatgggagtg ataacagaag ctttaatggg agagtaagaa atgagaaaca tagaaatcta
     1321 aggctgaagc caacaccaaa agagggagca cacctgttcc ctacctcctg gaagtggagc
     1381 caagtttcag gatttgcatc ccaagagtct ctaagaattc ttgccatggt cctaaaaact
     1441 ggattttaag attattttac ttccccttca tgcctgtctc cagtatccac cccagcttct
     1501 ttctgaatgt aagggattaa gatatcagct gtaaacttaa ctttgtctcc gaatctgaga
     1561 attcgaaaga aagctatgct cagtctctgt acatgctgaa ctccaaattc ttccatatca
     1621 acttcaagcc ccaagcctcc aatgtattac ctaccatgcg catgaataat tttcttccat
     1681 ggcttttaca ctgtcaacgg ctttacctac tttttaaaat taagtctttg attttatgat
     1741 ttatttctgt atggcactgg ataaaaatat tattaaaaca tttctgccta tggttaaaaa
     1801 tccagaaatc aaagaaatga tcttcatgat aaacttcaaa ggaacaaact ttatgtttta
     1861 gcttctaaag acaaaaatat agtgttttta gcttttagtt aaactttata attctttgca
     1921 atttttaagt attttaaact aaatatgcaa ggtttgttct atattatgat cactattaat
     1981 cttttatcac tcaattttaa aactagtaat ttactttggc tcagaaatgt actatattta
     2041 taattattgt attatttaaa ttaaatagaa ggtgatagaa ctgatattta aaaccatggc
     2101 tcatttaagt tcttatcaaa acatatacat tctagtctat tcagagtgag cttgctctta
     2161 ttttgaattt tttccattaa ctatatcttt agcaaaaata attaaaatgc ccagtcactg
     2221 ccctttctat tggtggagaa caatcgcaaa atctgtgtat aattagcaat aacagaacta
     2281 aaccattgtt tagttgctaa tcatatgttg ctttatccat atgctgtatg actccataac
     2341 atgtatgact ttaaatggct ggaactgctc atatgtggac taaactattt ttgacatgtt
     2401 catattttta taacttaaga aataaaataa aagctgcatt ttcacaagtt ttctc
//
