LOCUS       NM_026916                645 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus nuclear protein transcriptional regulator 2 (Nupr2),
            transcript variant 2, mRNA.
ACCESSION   NM_026916 XM_916186
VERSION     NM_026916.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC100444.1, CJ051706.1 and EL963130.1.
            
            On Mar 6, 2009 this sequence version replaced NM_026916.2.
            
            Transcript Variant: This variant (2) differs in the 3' UTR compared
            to variant 1. Variants 1 and 2 both encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100444.1, CN841721.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-34                BC100444.1         1-34
            35-35               CJ051706.1         8-8
            36-592              BC100444.1         36-592
            593-645             EL963130.1         486-538
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 68.26 cM"
     gene            1..645
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /note="nuclear protein transcriptional regulator 2"
                     /db_xref="GeneID:69034"
                     /db_xref="MGI:MGI:1923099"
     exon            1..382
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..361
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /note="nuclear transcriptional regulator 1-like protein;
                     nuclear transcriptional regulator protein 2; nuclear
                     protein transcriptional regulator 1 like"
                     /codon_start=1
                     /product="nuclear protein 2"
                     /protein_id="NP_081192.2"
                     /db_xref="CCDS:CCDS51654.1"
                     /db_xref="GeneID:69034"
                     /db_xref="MGI:MGI:1923099"
                     /translation="MDPPTRPSVSGPRTRARPPPPEALPTVGFEEEVYDCLDYYYLRD
                     FPASGAGRSKGRTRREQQLRTNYPVPGGHERKVAQILLNGQRKRRQRQLQPRPRTRLA
                     "
     exon            383..431
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /inference="alignment:Splign:2.1.0"
     exon            432..628
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      604..609
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /note="hexamer: ATTAAA"
     polyA_site      628
                     /gene="Nupr2"
                     /gene_synonym="1810010E01Rik; 4930579G22Rik; Nupr1l"
                     /note="major polyA site"
ORIGIN      
        1 ggggcattcc ggcggagtga ccagcggcgg cggcgggcgg agcgcatcgg cgatggaccc
       61 tccaactcgt ccttctgtct ccggcccaag gactcgagcc cgcccgccgc cgccggaggc
      121 gctgcccacc gtcggcttcg aagaggaggt gtacgactgc ctggattact actacctgcg
      181 tgacttcccg gcctctgggg ctggacgcag caagggccgg acgcggcgcg agcagcagct
      241 acgcaccaac tacccggtgc ccggcggcca cgagcgcaag gtggcgcaga tactgctcaa
      301 cgggcagcgc aagcggcgcc agcgccagct gcaaccgcgg ccgcgcacac gcctggcctg
      361 agcacacgcc acgcttgagc gggaacctga gacaggagga tcttgagttg gagtcctgcc
      421 tgggcattat tgaaacctga aagacctgtt aaaaactctt ttccagctgt aaccaagatc
      481 ctccgtgctg gtcacctgga ctttttgaca gggttttaag tttactgctc tagtgttttt
      541 cctcactaat taattgttaa gtaagtagtt tcctggtgtg tatgcctttt ttagggtttt
      601 tcaattaaaa gagcacagca agaatgtaaa aaaaaaaaaa aaaaa
//
