LOCUS       NM_001081668            1144 bp    mRNA    linear   ROD 27-FEB-2024
DEFINITION  Mus musculus nucleoporin 62 C-terminal like (Nup62cl), mRNA.
ACCESSION   NM_001081668 XM_205358 XM_907647
VERSION     NM_001081668.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Zhang,W., Zhang,R., Wu,L., Zhu,C., Zhang,C., Xu,C., Zhao,S.,
            Liu,X., Guo,T., Lu,Y., Gao,Z., Yu,X., Li,L., Chen,Z.J., Qin,Y. and
            Jiao,X.
  TITLE     NLRP14 deficiency causes female infertility with oocyte maturation
            defects and early embryonic arrest by impairing cytoplasmic UHRF1
            abundance
  JOURNAL   Cell Rep 42 (12), 113531 (2023)
   PUBMED   38060382
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (bases 1 to 1144)
  AUTHORS   Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
            Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
            Abuin,A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ067064.1 and BC100367.1.
            
            On or before Jul 11, 2009 this sequence version replaced
            XM_907647.2, XM_205358.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100367.1, SRR5189685.193585.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                CJ067064.1         2-17
            17-1144             BC100367.1         1-1128
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 61.35 cM"
     gene            1..1144
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /note="nucleoporin 62 C-terminal like"
                     /db_xref="GeneID:279706"
                     /db_xref="MGI:MGI:2685565"
     exon            1..156
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            157..262
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..1026
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /note="novel Nsp1-like C-terminal region containing
                     protein"
                     /codon_start=1
                     /product="nucleoporin-62 C-terminal-like protein"
                     /protein_id="NP_001075137.1"
                     /db_xref="CCDS:CCDS53206.1"
                     /db_xref="GeneID:279706"
                     /db_xref="MGI:MGI:2685565"
                     /translation="MFPSMPYVPASMASQELSSTTSTTTTTTVTTNTTTTITSGFNLY
                     VRPPASPWLNNTGLINVASMPSTMTVNSIVTPVMTYGPLESMANNWHYQLQEQEKHYF
                     YQANQFNLWNQALIESGNEIALLYNEVERVKIDQSRLEQELDIILFQQKELEQMLTPI
                     EELLKEQNGPLNMMYVNKEYEMIYRLAEIIDAELKRMSQDLKDIVVYLNSLAHPADAT
                     EQLEQICKILNAHMESLQWINLNSGVMQKKVEEVANAVEEYRRKEQEAMKAAFE"
     exon            263..419
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            420..570
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            571..620
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            621..755
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            756..867
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            868..934
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1128
                     /gene="Nup62cl"
                     /gene_synonym="Gm719"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccacggag gtaagagcag gactttaacg tttgtcccgc aggcttttcg cggcgagctt
       61 tcccgcgccg ccccccaccc ttaccaggtc gccaattccg ggtctgagaa ctcagtacct
      121 tcagcgggtc cggagcggag cagtggacgc ggaagggtct acttcaggat ctactctgtg
      181 gataccactg agactttgag gactaagatg tttccttcaa tgccgtatgt tcctgcctcc
      241 atggcttctc aggaactctc atccacaacc tcaacgacta ccactactac ggttaccacc
      301 aacaccacta ccacgattac aagtggcttc aacctgtatg tgagaccacc tgcatcacct
      361 tggctgaata acactggctt gatcaatgtg gcttctatgc cttctaccat gactgtgaac
      421 tcaatagtaa ctcctgtgat gacatatggt cctctggaga gtatggcgaa caattggcac
      481 tatcagctac aagaacaaga aaaacactat ttttatcagg ccaaccaatt caatctttgg
      541 aaccaagcac tgattgagtc tggtaatgag attgctcttt tgtacaacga agtggaaaga
      601 gtgaaaattg atcagagcag gttggaacaa gaattggata ttatcctgtt ccagcagaag
      661 gaactggaac aaatgttgac tcctatagag gagcttttga aggagcagaa tggtcctctt
      721 aatatgatgt atgtgaataa ggagtatgag atgatttaca gattggcaga aattatagat
      781 gctgagctga aaaggatgtc tcaggatctc aaggacatcg ttgtttacct gaattcactg
      841 gctcatcctg ctgatgctac tgaacagctg gagcagatct gcaaaattct gaatgctcat
      901 atggaatccc tgcagtggat taaccttaat tcaggcgtaa tgcagaagaa ggtggaagag
      961 gttgcaaatg cagttgagga gtaccgtcgc aaggagcaag aagccatgaa ggctgccttt
     1021 gaataactat cactccaaat tgctcctttt ggattactca ttaaccctga gttctgatga
     1081 tattaaatag agtagtattt tcagttacta cttaattttt gattggaaaa aaaaaaaaaa
     1141 aaaa
//
