LOCUS       NM_030094               1285 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus nudix hydrolase 17 (Nudt17), transcript variant 1,
            mRNA.
ACCESSION   NM_030094
VERSION     NM_030094.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK019109.1 and AK134929.1.
            
            Transcript Variant: This variant (1) represents the predominant
            transcript and encodes isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134929.1, AK019109.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1108              AK019109.1         6-1113
            1109-1285           AK134929.1         1097-1273
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 41.95 cM"
     gene            1..1285
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /note="nudix hydrolase 17"
                     /db_xref="GeneID:78373"
                     /db_xref="MGI:MGI:1925623"
     exon            1..233
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             42..932
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     nucleoside diphosphate-linked moiety X motif 17; nudix
                     motif 17; nudix (nucleoside diphosphate linked moiety
                     X)-type motif 17"
                     /codon_start=1
                     /product="nucleoside diphosphate-linked moiety X motif 17
                     isoform 1"
                     /protein_id="NP_084370.1"
                     /db_xref="CCDS:CCDS51008.1"
                     /db_xref="GeneID:78373"
                     /db_xref="MGI:MGI:1925623"
                     /translation="MAAARLLLRLAGRLESVSFTQSVCGLLGAGQRPGPWHTHCSLER
                     GQLVLSSNPFPGASERLPIQRPLFCPFAALDQQPEVSKTEPLTNRGVDLGVAVILQSS
                     DQTVLLTRRTCTLRISPNLWVPPGGHMEPDEEILECGFRELWEECGLQLPKNQFSCVL
                     LGLWESAYPPRLSWGFPKYHHLILYVLVISQESQEQLQARIQVNPNEVNAFMWLGPDV
                     AAAVVATEDGTRTPGLFSQDLPLSVCATELKDDGGTQPLVLPMPTLMRTTPTTAEEDK
                     ERIGAGTKFALQLWLQHLGR"
     exon            234..417
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            418..443
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            444..536
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            537..635
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            636..772
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            773..933
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1285
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1091..1096
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1109
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /note="major polyA site"
     regulatory      1264..1269
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1281
                     /gene="Nudt17"
                     /gene_synonym="2410015C20Rik"
ORIGIN      
        1 gcaagcggtg gccagagctg cgcggtgacc agagctgcgc gatggctgcc gcacggttgc
       61 tgttgcgcct cgccgggcgc ctggagtcag tgagcttcac acagagcgtg tgtggactcc
      121 tgggtgcggg gcagagaccc gggccgtggc acacgcattg cagcttggag cgaggacagc
      181 ttgtcctctc tagcaatcca ttccccggcg cttcggagag gcttccaatc cagagacctc
      241 ttttctgccc ttttgcggct ctggaccagc agcctgaggt ctccaagaca gagccgctca
      301 caaatagagg tgtggatctg ggtgtggcgg tcattcttca gtccagtgac cagactgtac
      361 tgttgacccg aaggacatgc actctccgca tttcccccaa tctgtgggtc cctccaggtg
      421 ggcacatgga acctgatgag gagatactgg agtgtggatt tcgagagctc tgggaagagt
      481 gtggactaca gctgcccaag aaccagtttt cttgtgtcct tctggggtta tgggagtctg
      541 cctaccctcc taggctgagc tggggcttcc ccaaatacca tcacctcatt ctctacgtac
      601 tcgtgatctc ccaggagtcc caggagcagc tccaggccag gatccaagta aacccaaatg
      661 aggtgaatgc ttttatgtgg ctgggaccag atgtagcggc agctgtggtt gccacagagg
      721 atgggacaag gacacccgga cttttctccc aggacctacc actctctgtc tgtgcaaccg
      781 aactgaagga cgatggagga acccaacctc tggtcctgcc catgcccaca ctcatgcgga
      841 caaccccaac cacagcagag gaggacaaag agaggatcgg cgctggaacc aagtttgccc
      901 tccagctctg gttgcaacat ctgggcagat gaggtaaaag tgacgtccac acagaccaca
      961 gaccagcaaa ggaagcctgt caacccaaga cctgggatgt ccttcgagat ggaaggagag
     1021 gccctactcc ataaagctgc cctctgactt ccacgtgcaa aaccatggtg cacgtgcccg
     1081 catacacagt aataaacact ttaaatgttc tttttttttt tttaagtgaa aggatggaac
     1141 atggaccctc tgccccacaa accctgggtc tggaaagcga ggtacaacat cccttcccct
     1201 ccatgacgct cacagaacat tcacaacctt tattgtaggc gagaactctg ctacaacttt
     1261 gggaataaaa gtaaaatcac atcac
//
