LOCUS       NM_029760               1230 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Mus musculus nucleotide binding protein-like (Nubpl), mRNA.
ACCESSION   NM_029760 XM_885240 XM_896046 XM_922597 XM_980229 XM_980268
            XM_990907
VERSION     NM_029760.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Cheng,C., Cleak,J., Weiss,L., Cater,H., Stewart,M., Wells,S.,
            Columbres,R.C., Shmara,A., Morato Torres,C.A., Zafar,F., Schule,B.,
            Neumann,J., Hatchwell,E. and Kimonis,V.
  TITLE     Early embryonic lethality in complex I associated p.L104P Nubpl
            mutant mice
  JOURNAL   Orphanet J Rare Dis 17 (1), 386 (2022)
   PUBMED   36280881
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1230)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1230)
  AUTHORS   Perez-Garcia,V., Fineberg,E., Wilson,R., Murray,A., Mazzeo,C.I.,
            Tudor,C., Sienerth,A., White,J.K., Tuck,E., Ryder,E.J., Gleeson,D.,
            Siragher,E., Wardle-Jones,H., Staudt,N., Wali,N., Collins,J.,
            Geyer,S., Busch-Nentwich,E.M., Galli,A., Smith,J.C., Robertson,E.,
            Adams,D.J., Weninger,W.J., Mohun,T. and Hemberger,M.
  TITLE     Placentation defects are highly prevalent in embryonic lethal mouse
            mutants
  JOURNAL   Nature 555 (7697), 463-468 (2018)
   PUBMED   29539633
REFERENCE   5  (bases 1 to 1230)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   6  (bases 1 to 1230)
  AUTHORS   Nakano,Y., Jahan,I., Bonde,G., Sun,X., Hildebrand,M.S.,
            Engelhardt,J.F., Smith,R.J., Cornell,R.A., Fritzsch,B. and Banfi,B.
  TITLE     A mutation in the Srrm4 gene causes alternative splicing defects
            and deafness in the Bronx waltzer mouse
  JOURNAL   PLoS Genet 8 (10), e1002966 (2012)
   PUBMED   23055939
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY160608.1, BC062175.1 and AI118524.1.
            
            On Feb 7, 2008 this sequence version replaced NM_029760.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK141257.1, BC062175.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                BY160608.1         2-20
            20-1186             BC062175.1         1-1167
            1187-1230           AI118524.1         1-44                c
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 22.11 cM"
     gene            1..1230
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /note="nucleotide binding protein-like"
                     /db_xref="GeneID:76826"
                     /db_xref="MGI:MGI:1924076"
     exon            1..146
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..998
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /note="iron-sulfur protein NUBPL; iron-sulfur cluster
                     transfer protein NUBPL"
                     /codon_start=1
                     /product="iron-sulfur cluster transfer protein NUBPL
                     precursor"
                     /protein_id="NP_084036.2"
                     /db_xref="CCDS:CCDS36442.2"
                     /db_xref="GeneID:76826"
                     /db_xref="MGI:MGI:1924076"
                     /translation="MGTWRRLLLFGGVSLRGGGAATVPPRGCRALGCGRQLLGAESEA
                     LKQRRTQIMSRGLPKQKPIEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVG
                     LLDVDVYGPSIPKMMNLRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLM
                     VMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPISGAVIVSTPQDIALMDA
                     HKGAEMFRKVNVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLDLDVLGDVPL
                     HLSIREASDMGQPVVFSQPGSDEAKAYLHIASEVVRRLKSSPE"
     exon            147..294
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            295..329
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            330..420
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            421..460
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            461..551
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            552..645
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            646..731
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            732..852
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            853..935
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            936..1193
                     /gene="Nubpl"
                     /gene_synonym="2410170E07Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagtgcttcc atcccggccc gagcaagagc cgcgcgccat ggggacctgg cggcgtttgc
       61 tgctctttgg cggggtgtca ctccggggtg gtggcgcggc cactgtcccg ccccgggggt
      121 gccgagcttt gggttgtggg cgccagttat taggcgctga gagtgaggcc ttgaaacaaa
      181 gaagaacaca aatcatgtcc cgaggacttc ctaagcagaa gcctatagaa ggtgttagag
      241 aagtcattgt tgtggcctct ggaaagggtg gtgttggaaa gtctaccacc gcagtgaacc
      301 ttgctcttgc gctggcagca aatgattcgt ccaaggcggt tggcttgtta gatgtggatg
      361 tgtatggtcc ttccattcca aagatgatga acctgagagg aaatccagaa ttatcaccaa
      421 ataacctaat gaggcctctt ttgaattatg gtattgcttg tatgtcaatg ggctttttgg
      481 ttgaagagac tgcgccactt gtttggagag gccttatggt aatgtcagcc attgagaaat
      541 tattgagaca ggttgattgg ggtcagctgg actatttagt tgtggacatg ccaccaggaa
      601 caggagacgt gcagctgtca gtttcacaaa atattcccat ttcaggtgct gtgattgtct
      661 ccacacctca ggacattgca ctgatggatg cacacaaggg tgcggagatg tttcggaaag
      721 tcaatgtgcc tgttcttggt cttgtccaaa acatgagtgt cttccagtgt ccaaaatgta
      781 aacacaaaac tcatattttt ggtgctgatg gtgcaagaaa actagcacag acccttgatc
      841 ttgatgttct aggagatgtt cccttgcacc tcagtataag ggaagcttcg gatatgggtc
      901 aaccagttgt cttttctcag cctggaagtg atgaggccaa agcttacctg catattgctt
      961 ccgaagtggt gagaagattg aagtcatctc cagaatgatt cccgagtgcc ctggaaattg
     1021 tcctggtatt tgacaatcat gaactgtcaa acatgagtat tgtggtcgtg tggaacccac
     1081 aaaaataatg acaattctga ttattttctt tcatctctaa agaaataatg tctcattttc
     1141 agatttgatt tgacaaccta tgattcacaa ataaaatgta catgtatgtg tgcaaaaaaa
     1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
