LOCUS       NM_025636               1155 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus nucleoside-triphosphatase, cancer-related (Ntpcr),
            transcript variant 1, mRNA.
ACCESSION   NM_025636
VERSION     NM_025636.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Visel,A., Thaller,C. and Eichele,G.
  TITLE     GenePaint.org: an atlas of gene expression patterns in the mouse
            embryo
  JOURNAL   Nucleic Acids Res 32 (Database issue), D552-D556 (2004)
   PUBMED   14681479
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK010823.1, AK006433.1 and AC151909.5.
            
            On May 7, 2009 this sequence version replaced NM_025636.4.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC025168.2, AK010823.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-873               AK010823.1         2-874
            874-1141            AK006433.1         782-1049
            1142-1155           AC151909.5         161919-161932
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 73.65 cM"
     gene            1..1155
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /note="nucleoside-triphosphatase, cancer-related"
                     /db_xref="GeneID:66566"
                     /db_xref="MGI:MGI:1913816"
     exon            1..147
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             114..686
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /EC_number="3.6.1.15"
                     /note="isoform 1 is encoded by transcript variant 1;
                     nucleoside-triphosphatase C1orf57 homolog; cancer-related
                     nucleoside-triphosphatase homolog; NTPase; nucleoside
                     triphosphate phosphohydrolase"
                     /codon_start=1
                     /product="cancer-related nucleoside-triphosphatase homolog
                     isoform 1"
                     /protein_id="NP_079912.1"
                     /db_xref="CCDS:CCDS22781.1"
                     /db_xref="GeneID:66566"
                     /db_xref="MGI:MGI:1913816"
                     /translation="MSRHVFLTGPPGVGKTTLIQKAIEVLQSSGLPVDGFYTQEVRQE
                     GKRIGFDVVTLSGAQGPLSRVGSQPLPGKPECRVGQYVVNLDSFEQLALPVLRNAGSS
                     CGPKHRVCIIDEIGKMELFSQPFIQAVRQMLSTPGIIVVGTIPVPKGKPLALVEEIRK
                     RRDVKVFNVTRDNRNSLLPDIVAVVQSSRT"
     exon            148..310
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            311..407
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            408..617
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            618..1155
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1032
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
     regulatory      1120..1125
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1155
                     /gene="Ntpcr"
                     /gene_synonym="2310079N02Rik"
                     /note="major polyA site"
ORIGIN      
        1 gctttccctg ccgacagggg cgtggccttc agcgtaaggg gtggagcctg gccgcccatt
       61 ctgacccccg accgccccgc tctggaccac cccgcaccca gacccccacg cacatgtcgc
      121 ggcacgtgtt cctcaccggg cctccagggg ttggcaaaac aaccttgatc cagaaagcca
      181 tcgaggtcct gcagtcctcc gggctgcccg tggatggatt ttacacacaa gaagtcaggc
      241 aggaagggaa gaggatagga ttcgatgtcg tcaccctgtc tggtgcccag gggcctctgt
      301 ccagagttgg gtcacagcct ctacctggaa agcccgagtg tcgagtgggg cagtatgtgg
      361 tgaacttgga ttcttttgag cagttggcac ttcctgtcct aagaaacgca ggctccagct
      421 gtggccccaa acacagagtg tgtatcattg acgagatcgg gaagatggag ctcttcagcc
      481 aacctttcat ccaagcggtc cgccagatgc tgtccacacc aggcattatc gtggttggca
      541 ctatcccagt ccccaaaggg aagccactgg ccctggtgga agaaatcagg aaaaggcgtg
      601 acgtgaaggt gttcaatgtc accagggaca acagaaacag cctcttgcca gatattgtgg
      661 ccgtcgtgca gagcagccgg acgtaaagca gcgctgttgg gtccagctct gcctctgctc
      721 acggtgggcc ctgagcagca cccagtcagt ccaccgtcct ctgctcacgg tgggccctga
      781 gcagcaccca gtcagtccac cgtgtcctgt gtgagctcca gacttgtatt tcctcttacg
      841 gttgtgcatg cggtttgagt aaattctaaa acgagtctgc caaacattag gcggaattcg
      901 ctcccaccgg agtgtataat atgtttgggg ctgaggaaag acgggggttc acttcttcct
      961 tgactttgag tgctgtagat attaaacacc tctccaggtg cagctccaca ctggtgcagc
     1021 tgaaagcaga aacaactggt tctcttcaat tatttccaaa ggaggaaaaa aaaatcagtt
     1081 ctcctctccc tctcttgttt attcctctgt ttcttgacta ataaaaatgg aaataaatgt
     1141 ggtggttcag ataga
//
