LOCUS       XM_006541313            2031 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus neurotrophin 5 (Ntf5), transcript variant
            X2, mRNA.
ACCESSION   XM_006541313
VERSION     XM_006541313.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006541313.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2031
                     /gene="Ntf5"
                     /gene_synonym="2900040K06Rik; NT-4; NT-5; NT4; NT4/5;
                     Ntf-5; Ntf4"
                     /note="neurotrophin 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 6 ESTs, 7
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:78405"
                     /db_xref="MGI:MGI:97381"
     CDS             298..927
                     /gene="Ntf5"
                     /gene_synonym="2900040K06Rik; NT-4; NT-5; NT4; NT4/5;
                     Ntf-5; Ntf4"
                     /codon_start=1
                     /product="neurotrophin-4 isoform X1"
                     /protein_id="XP_006541376.1"
                     /db_xref="GeneID:78405"
                     /db_xref="MGI:MGI:97381"
                     /translation="MLPRHSCSLLLFLFLLPSVPMEPHPPSSTLPPFLAPEWDLLSPR
                     VALSRGAPAGPPLLFLLEAGAYGEPAGAPANRSRRGVSETAPASRRGELAVCDAVSGW
                     VTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKAESAGEGGPGVGGGGCRGV
                     DRRHWLSECKAKQSYVRALTADSQGRVGWRWIRIDTACVCTLLSRTGRA"
ORIGIN      
        1 gcagtcggag tcttgggcgg gccctggcct gtcctgcgag gagcgaacat tccaggaagc
       61 agcctcaggg acccagagcg tgggccggcg gggacccggg tgtccaggcc agccccacct
      121 ccgccgcgtt tagtggagga ctggaggacg ggaggagggg atgtggttgc cccctccctc
      181 tcctgagatg tcagggagga gactacctgt atcctacaaa ggggccccac acagcctggg
      241 ggcccccagt cccagagtga ggaggtggag gtgctgctgt tgacaggtgt gcaagccatg
      301 ctccctcgcc actcctgttc tctcctcctt ttcctcttcc tcctccccag cgtccccatg
      361 gagccccacc ccccatcctc caccctgccc ccatttctgg cccctgagtg ggacctcttg
      421 tctccccgag tggccctgtc aaggggcgcc cctgccgggc cccctctcct cttcctgctg
      481 gaggccgggg cctatggaga gccggcaggg gccccagcca accgcagccg gcgcggggtg
      541 agtgagaccg cacccgcaag ccgccggggt gagctggcag tatgcgacgc agtgagtggc
      601 tgggtgaccg accggcggac agctgtggac ttgcgtgggc gcgaggtgga ggtgctgggc
      661 gaggtgcctg cggcaggtgg cagtcccctg cgtcagtact tcttcgagac gcgctgcaag
      721 gccgaaagcg ctggggaagg tggcccaggt gtgggcggag ggggttgtcg cggcgtggat
      781 cggaggcact ggctctcaga atgcaaggct aagcagtcct atgtgcgggc gttgactgca
      841 gactcccagg gccgcgtagg ctggcgctgg attcggatcg acacagcttg cgtctgcacg
      901 ctcctcagcc gaacaggccg agcctgaggt ccaggcttgg gaactgccca agttgaggga
      961 aaacaaaaaa caaaaaacca aagctggatg ctgaaaggac cacaggggtg gcctggctgc
     1021 tctaccgtgc cttatgactg ggaactggaa taaccaaaga atcaaatctc tctcaaatct
     1081 cagtctgtgt ggaatgtatg gtgaaaccaa atgaggtttc aagtgatgaa taggagttct
     1141 cccggaggaa cttgacatta ataacaatag ccaatgttta ctatctcctg tttatcagac
     1201 ctgatatatg actttggcaa ccattttaac atcagaggac cctggctcat caaaacggac
     1261 gaggaaagaa cgcatgaaaa ggggatgcat gatgcatgcg ctggagctag gcctccatca
     1321 gtaggctgtt tctggttgcc tggcacgcac acagtcctgg gctccatcct gaacatcata
     1381 aaccatgcac ggtggtactc atctgtaggt acaggcaggt agatcatggc catccttagc
     1441 tacataggga ggttgaagcc agccttgtct gtatgagaat ctatcttaat aaaataaaag
     1501 gcctgggact gggtgttgtg gtatgtactg taatcctaat gcttaaaagg ctgcagacag
     1561 aagattgcct ggaggtccag ggcagcctgg gctacatact taaactgctc tgtctggggc
     1621 gagggcaaat gggtcagatg ggaaaacaat ggaagcagct ggccctggaa ccttaaggat
     1681 gggatcaggg aaagctaggt tcaccagaca agtcccacct ggccaaagtg cacaagcgtt
     1741 gcctaggaat acagcatcct gctttgagca gtgaacccga ccacccaggg agtgcaagca
     1801 agcatggata cctcccatcc aacatgaccc tagtcttttt tttttttttt ttgttcagct
     1861 ctgatttgga gacagagtct cctcatgcag ctcattggag ggtggacttt gaactttttt
     1921 cttttttcca aggcaggatt tctctgtgta gccctggctg tcctggaact cactctgtag
     1981 accaggctgg cctcgactcc ctaatgccgg cattaaaggc atacatcacc a
//
