LOCUS       NM_001102650            1425 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus 5'-nucleotidase, cytosolic IIIB (Nt5c3b), transcript
            variant 1, mRNA.
ACCESSION   NM_001102650
VERSION     NM_001102650.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL590968.8, BY047327.1, AK148222.1 and BE944684.1.
            
            On May 4, 2018 this sequence version replaced NM_001102650.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK148222.1, SRR7652917.805845.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 AL590968.8         158066-158074       c
            10-34               BY047327.1         1-25
            35-1407             AK148222.1         2-1374
            1408-1425           BE944684.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 63.47 cM"
     gene            1..1425
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /note="5'-nucleotidase, cytosolic IIIB"
                     /db_xref="GeneID:68106"
                     /db_xref="MGI:MGI:1915356"
     exon            1..55
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..946
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.91"
                     /note="isoform 1 is encoded by transcript variant 1;
                     cytosolic 5'-nucleotidase III-like protein; cN-III-like
                     protein; 5'-nucleotidase, cytosolic III-like; cytosolic
                     5'-nucleotidase 3B; 7-methylguanosine phosphate-specific
                     5'-nucleotidase; 7-methylguanosine nucleotidase;
                     N(7)-methylguanylate 5'-phosphatase"
                     /codon_start=1
                     /product="7-methylguanosine phosphate-specific
                     5'-nucleotidase isoform 1"
                     /protein_id="NP_001096120.1"
                     /db_xref="CCDS:CCDS48931.1"
                     /db_xref="GeneID:68106"
                     /db_xref="MGI:MGI:1915356"
                     /translation="MAEEVSSLMKATVLMRQPGRVQEIVGALRRGGGDRLQVISDFDM
                     TLSRFAYNGQRCPSSHNILDNSKIISEDCRKELTELFHHYYPIEIDPHRTIKEKLPHM
                     VQWWSKAHSLLCQQRIQKVQIAQVVGESTAMLREGYKTFFDTLYQNNIPLFIFSAGIG
                     DILEEIIRQMKVFHPNIHIVSNYMDFSEDGFLKGFKGQLIHTYNKNSSVCENSSYFQQ
                     LQNKTNIILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKDE
                     TLDVVNGLLRHILYQGDCVELQGS"
     exon            56..154
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            155..224
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            225..271
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            272..357
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            358..447
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            448..610
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            611..811
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     exon            812..1409
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1385..1390
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /note="hexamer: ATTAAA"
     polyA_site      1407
                     /gene="Nt5c3b"
                     /gene_synonym="2610037D24Rik; C330027I04Rik; Nt5c3l"
                     /note="major polyA site"
ORIGIN      
        1 ggcgggcgct gtcttcgggg ccgcccacca ggccagcggc gtgatggcgg aggaggtaag
       61 cagcctgatg aaggccacgg tcctgatgcg gcagcccgga cgggtgcagg aaattgtggg
      121 cgcccttcgc aggggcggag gagaccgcct gcaggtgatt tccgattttg acatgaccct
      181 gagcagattt gcttacaatg gacagcgatg cccttcttcc cacaatattc tggataacag
      241 caaaattatc agtgaggatt gtcgcaaaga gctcaccgag ctctttcacc actattatcc
      301 cattgagatc gacccacacc ggaccatcaa agagaagctg cctcacatgg tgcagtggtg
      361 gagcaaagcc cacagtctcc tgtgccagca gaggatccag aaagtccaga tcgctcaggt
      421 ggttggagag tccactgcga tgctcaggga gggctataag acgttcttcg acacactcta
      481 ccagaacaac atcccccttt tcatcttctc agcgggcatt ggtgacatcc tggaagaaat
      541 tatccgacag atgaaagtgt tccaccccaa catccacatt gtgtccaact acatggactt
      601 cagtgaggat ggattcctga aaggattcaa ggggcagctc attcacacct acaacaagaa
      661 cagctccgtg tgtgagaact ccagctactt ccagcaactt cagaacaaga ccaacatcat
      721 cctgctggga gactccatcg gggacctcac catggctgat ggggtccccg gggtgcagaa
      781 cattctcaag atcggcttcc tgaatgacaa ggtggaggag cggcgggagc gttacatgga
      841 ctcctacgac attgtgttgg agaaggacga gacgctggac gtggttaatg ggttgctgcg
      901 gcacatcctt taccaggggg actgcgtgga gctccagggc tcttaaggct caggccgggc
      961 cctgcctcag ccatgaggag gagaccttgc ccacaaagcc atcccctgtc agcacagaga
     1021 gaagttcaga gctgttgggc cctcccacac cccctgactc cttccccatg cctctgcctc
     1081 cctcctgctc acaagaggct cgagggaggc ctgtgggaag gcggccaatg cacttccaag
     1141 taaaccatgg accacagcct tctaaccgaa gtgtgagcct tctacagatc atctggtcca
     1201 aaagttctct ctaagaacgt tttcagagct gggaatacag atggctcaat ggtaaagcca
     1261 ctgcctagca tatggagggc cctgggttcc ttcccccagc actgtatggg ggtgggggtg
     1321 ggggcagaga aaaagaaaag ctgtatgtcc aagaaatata atgtaatgtg tgaatcagat
     1381 gaaaattaaa atacaagctg ggcggtggaa aaaaaaaaaa aaaaa
//
