LOCUS       XM_036162643            5036 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NOL1/NOP2/Sun domain family member 6
            (Nsun6), transcript variant X4, mRNA.
ACCESSION   XM_036162643
VERSION     XM_036162643.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5036
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..5036
                     /gene="Nsun6"
                     /gene_synonym="4933403D21Rik; 4933414E04Rik; NOPD1"
                     /note="NOL1/NOP2/Sun domain family member 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 7 ESTs, 106 long SRA reads, 4 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:74455"
                     /db_xref="MGI:MGI:1921705"
     CDS             411..1688
                     /gene="Nsun6"
                     /gene_synonym="4933403D21Rik; 4933414E04Rik; NOPD1"
                     /codon_start=1
                     /product="tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
                     isoform X1"
                     /protein_id="XP_036018536.1"
                     /db_xref="GeneID:74455"
                     /db_xref="MGI:MGI:1921705"
                     /translation="MTTVRVNTHLGSVQHVRGLLLEELQKQFGESSIPVVQHPALPDV
                     LLIPMTGPRKNIERQQGEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSD
                     INGKCKKGAKEFDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNV
                     LPSYIFLQNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKIL
                     TKVNKLKQNASLLGLHSIRAFCFDATKALKLDTTDGIEGGPPFLPESFDRIILDAPCS
                     GMGQRPNMACTWTLKEVTSYQPLQRKLLHVAVQLLKPGGVLVYSTCTITLAENEEQVA
                     WALRTFPCLQLQPQEPQIGGEGMVGAGLTLEQLKQLQRFDPSVVPLQNMDTDSLGEAR
                     REDMIWLANKDCIGFFIAKFLKCQSTKAKVSQK"
ORIGIN      
        1 agtgacgaac ccaggaagcg actttctgtt ccgaagctgg gggcgcggtt ttggaaaata
       61 gcatgtcaga gtggatctag gcgctgtctg ttttccgatc tgcgtttagg tacacttttt
      121 gtcaccaagc cctatttggc gcagtgtcgc agttcggagc tgtctcacag catcccagag
      181 aacgacaaac cttgggccct gctcattcca gaactcagca ctgaaaggca ttcttgtgct
      241 cgtccattgg ctggcaacgc tgaaattcgg aaataaagac tgcttcccaa cattttcttg
      301 gacaacttaa aacagaaaaa aatcaaaaga atgctgtgtc tgcttcaagc agacaagaag
      361 cagaaaggaa atttgagact ctgctgcttc gcctgtcaca ccctccgtcg atgacaactg
      421 tcagagtgaa tacgcattta ggctcagttc agcatgtcag aggtctgctg cttgaagagc
      481 tccagaagca gtttggtgaa tccagcattc ctgttgttca gcatccagcc ctcccggatg
      541 tcttgctcat ccccatgact ggaccaagga agaatataga aagacaacag ggtgaagtga
      601 ttgttggcgc acagtgtggc aatgcagtgt taagaggggc ccatgtctat gttccaggaa
      661 ttgtgtcagc ttcaaaattt atgaaagctg gagatgttat ttccgtgtat tctgatatta
      721 acggcaaatg taagaaagga gccaaagaat ttgatggaac taaagtattt ctcggaaacg
      781 gaatttctga actgagccgc aaagatatct tcaatgggtt acctgatctg aaaggtatag
      841 gcataagaat gacagaaccc atatatctca gtccctcgtt tgacaatgtt ctacccagtt
      901 atatattttt acagaattta ccatctacag ttgtagctca tgttcttgat cctcaacctg
      961 gagagaagat tctagatatg tgtgcagccc ctgggggcaa aactacacat actgcagcac
     1021 tgatgcagga caagggagaa gtaatagcat tggacaaaat attgacaaaa gtgaacaaac
     1081 tgaagcagaa tgcttcatta ttagggcttc attctatccg ggcattttgc ttcgatgcaa
     1141 caaaggcact taagcttgat actaccgatg gcatagaagg ggggcctcca ttcttaccag
     1201 aatcttttga ccgaattatc cttgatgcac cctgcagtgg aatgggacag aggccaaata
     1261 tggcttgtac ttggacttta aaggaagtga catcctatca gccactacag cgaaaactcc
     1321 ttcatgtggc agttcaactc ctgaagccag ggggagtgct ggtctacagc acatgcacaa
     1381 taaccttggc agaaaatgaa gagcaagttg cctgggccct ccgaacattc ccctgccttc
     1441 agcttcaacc ccaggaacca cagattggag gagaagggat ggtgggagct ggcctgacat
     1501 tggagcaatt gaagcagctg cagcgatttg atccgtctgt tgtaccactg cagaacatgg
     1561 acactgattc tcttggagag gccagaaggg aagacatgat ttggttggcc aacaaagact
     1621 gtataggctt ctttattgca aagtttctaa aatgtcaaag cacaaaagcg aaggtttctc
     1681 agaaatgaaa attctgaaga ctgtctgtgt gtggggcttt ttcttacaca gaagtgttgt
     1741 caagccaacg gagtgatggc atggttgctc aggaaacagg atgatgctaa tggcttccct
     1801 gggatcggaa ggagcagcat gcatacgtgg ttctggggaa gtgggggata ggaaagcata
     1861 atcagcctca tgctttatga aaggaaagga gttgcctgtg ggggtctgga atataatttc
     1921 agttttaact cataactatt agtctttcta atgtcataaa tattgtcttt ctatcaaaaa
     1981 aaatagtttg aaaacaagaa caaagctcta aagctttcaa gtggttatga aaaactgttt
     2041 tcagtttcca agatggtggt agcttcttca gtaagttttc aggacatgga cagtaacact
     2101 aacctcatca taactgaggt aagtaggctc gttgctggag tctgcctctg tctctctctg
     2161 cttactgatt gtaaatctgg cttcttaatt taaaggttta tttctgtact gagtatgtgt
     2221 gtggaacaca tggtgaagtc agaggaccac gtttgagaat cagtttctcg cctctacctt
     2281 gggttctgaa gcttgatctc agatcctcag gtttgtgttg caagtccttt ttccctgctg
     2341 agtcatttca ccaggccgca ggtcacttct aaataaagct tggatttgcg ctaaatactt
     2401 tgaaaggtga agtctagtga tttacgttgt agttaaaatg gccattgaga agtactccac
     2461 attttggctg tattttatca tctttgggaa cagacatcat gcaaaataat agggaaatgc
     2521 ttggtgagga ggagaaaagc agttactgag agccaggact cccatcccca ggagctgttc
     2581 cagaggttat tatgttagag ttctagattt aaagggttgc ctttttacta taaaattaca
     2641 accagaagac acacaaagac ttgcttccat cattccttct gtcaattttc aaaggccatt
     2701 tcaaaggtat caatggaagg ttctccccca aggtatgaag aacggtccta ctctgtcaga
     2761 aatttgtgga tcaagcttca tgattcatta gggtcaagta taaaaaggct tttattttac
     2821 attatatgat tgatattctt atagcagaaa aaataaagga tttaactgaa ttaattttga
     2881 aaaatatcat tgaggtatta acccagcatg gactaattat cacccctgat aaaattcaac
     2941 ataacaggcc aataaattat ttgggaaaaa caattcataa tgaatatatc atatctcaat
     3001 aatcgcaatt taggtttgat aaattaaaaa caatgatttt caaaaattat tgagaaatat
     3061 taattggatt aattttccaa ttaatttaaa aattaccaca ggacagttgc atcatttatt
     3121 tgacattctt aaaggagatc ctgatcccac gtctagagac agcttacaga agaagcctta
     3181 aaacaactag aattgataga acaaaagatg caagatgcaa aggtaaaaca aatacattag
     3241 ttaaaaccat ggtctcttct tatacttaaa acagcttaca ggcctactgc atggctatgg
     3301 caagaaggtg tgctagaatg gatttatttc cctcatactc tagtaaaaat ggtatcctct
     3361 tatcctttta tgtgtagtca attaataatt aaagggagga taagatccag ggaattattt
     3421 ggcaaagaaa tgcatggaat tgttattccc tacaatcagg agcaagtgga gtatttactt
     3481 ccaactgcgg ctgactgggg aatggcatta gctcaggata tgggataaac taaataccat
     3541 gtacctcaac accctatggt aaagttttag aagaaacaaa taccttttcc ttctaaaata
     3601 acattggaac ccgtttctga tgccctcttg gtatttacag atgggtcatc taatggaacc
     3661 tcggctgttt atataaaaga tagacctgga attattaaaa aggcaaaata aacttctgca
     3721 cagcaggcgg aaattattgc agttattact gcccttgaac acctgcctga agagtttaac
     3781 ctttatacag attcaaaata tgtagttcat ttatttcctg atatagagac agctcttata
     3841 tctgggagtt ccagaattat ataattcaat caagaaaaag aaaatttttt ataggacata
     3901 tcagaagaca tactggcctg ccaggtccat tggcttcagg aaatgctatg gcagatttat
     3961 taacgaagga acacgtaatt gctagtgtgg ttgaacaagc attggaaagt catgctttac
     4021 atcatcagaa cgcattggcc ttgagaagga tgttcaattt gacacgagaa caggctagac
     4081 aaattgtgaa ggattgcaaa cattgtcccg atgtatatca ttcattaaaa atgggagtta
     4141 actcaagggg ccttaaacct caagttttgt ggcaaatgga tgtaactcat atcccagaat
     4201 ttggaaaatt gtcctatgta cacgttattg tagataccta ttctcatgtg gttatggcta
     4261 ctgctagaac tgaagaggct gtgaaagatg tcatacaaca tcttattata tgcttctcct
     4321 cctcaggtgt gccaaaaaga attaaaactg ataatgctct agcttacatt tctcaaggtt
     4381 ttgcacagtt ttgcattcaa tggggtatag aacatataac agaaattcca tataaccccc
     4441 aaggtcatgc tatcatagaa aggattcatc aaaatctttt ttttttaaag atttatttat
     4501 tgttatatgt aagtacactg tagctgtctt cacacatacc agaagagggc atcagatctc
     4561 attatggatg gttgtgagcc accatgtggt tgctgggatt tgaactcagt atcttcggaa
     4621 gagcagtcag tgttcttaac cgctgagcca tctctccagc cccctcatca aaatcttaag
     4681 gtacaatttc agagattaaa atctagtgat cattattact cacctcatca atttttaagc
     4741 catggtttat ttaccattaa tcaccttact acagatgata aaggcttaac ccctatgcaa
     4801 aaacattggg ctcccctact gcagactcgt ttagtgatgt ggaaggatct tttaacaggc
     4861 acctgggaag ggccagatgt gttaatcacc tggggaagag gatatgcatg tgtttttcca
     4921 cagaatgcag agacccaatc tgcatcccag acagacttat tcgacccttc caaccagaaa
     4981 acctctacaa gaacccagaa gcaaaagaag gcaaaagaag taatgaagac attgaa
//
