LOCUS       XM_011240850            2395 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NOL1/NOP2/Sun domain family, member 5
            (Nsun5), transcript variant X1, mRNA.
ACCESSION   XM_011240850
VERSION     XM_011240850.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..2395
                     /gene="Nsun5"
                     /gene_synonym="9830109N13Rik; Nol1r; Wbscr20; Wbscr20a"
                     /note="NOL1/NOP2/Sun domain family, member 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 16 ESTs, 563 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100609"
                     /db_xref="MGI:MGI:2140844"
     CDS             54..1574
                     /gene="Nsun5"
                     /gene_synonym="9830109N13Rik; Nol1r; Wbscr20; Wbscr20a"
                     /codon_start=1
                     /product="28S rRNA (cytosine-C(5))-methyltransferase
                     isoform X1"
                     /protein_id="XP_011239152.1"
                     /db_xref="GeneID:100609"
                     /db_xref="MGI:MGI:2140844"
                     /translation="MGLYAAAAAVLAGVESRQGSLKGLVYSSNFQNLKQLYALVCETQ
                     RYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARL
                     KAELARLKVHRGVSRNEDLLQESSRPGQAYQVPRFVRVNTLKTRPEDAIDYFKRQGFS
                     YQGRASSVCYVRPCLCHVPVVSKQTFRNGSSLPLCWFKALPQVLRLVYLEDLRALKGQ
                     HFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACA
                     APGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVARAGVSCCELAEKDFLTVSPSD
                     QRYSQVQYILLDPSCSGSGMLSRQLEEHGEGTPSKERLQALAGFQQRALCHALRFPSL
                     QRLVYSTCSLCQEENEDVVQEALQHNSGTFRLAPVLPTWPHRGLSTFPGSEHCLRASP
                     ETTLTGGFFIAVFERAEVVPTPAPQTDAMDPEPLSQVPKRKRRRKAAVGASMQPST"
ORIGIN      
        1 aagccagccc gagttttgcg acagtgtcgt agagcgcttg aggcggggag agcatggggc
       61 tgtacgcggc cgccgcggcg gtgctggccg gcgtggaaag ccgccagggc tccctcaagg
      121 ggttggtgta ttccagcaac ttccagaacc tgaagcagtt gtacgctctg gtgtgcgaga
      181 cgcagcgcta ctcggccgtg ctggacgctg tcatcgccag tgctgggctc cttcgcgccg
      241 agaagaagct gagaccgcac cttgccaagg tgctagtgta tgaattattg ctggggaagg
      301 ggtttcgagg gggtggaggc cgatggaagg ctctgctggg ccggcaccag gcaaggctca
      361 aggctgagct ggcccgactc aaggttcatc ggggtgtgag ccgaaatgag gacctgttgc
      421 aagagagctc cagacctggc caagcctacc aggtaccacg gttcgtgcgt gtgaacacgc
      481 tcaagacccg ccctgaggat gcaatcgatt atttcaagag acaaggtttc tcctaccagg
      541 gtcgggcttc cagtgtatgt tatgtgaggc catgcctatg ccacgtgcct gtggtcagca
      601 aacagacttt caggaatggg tcttctctgc ccctctgctg gttcaaggca ttgcctcagg
      661 tcctcagact tgtgtacctg gaagacttgc gagctctcaa ggggcagcat tttcttttgg
      721 atcccttgct gcctgagctt cttgtatttc ctgcacagac agatctgcac gagcatccac
      781 tctaccgtgc tggccatctc atcctgcagg acaaggccag ctgcctccca gccatgctgc
      841 tgtccccccc gccaggctcc catgtcattg atgcctgtgc tgcccctggt aacaagacca
      901 gctacattgc agcccttcta aagaaccagg ggaagatctt tgctttcgac caggacgcta
      961 agcggctggc agccatggcg acgttggtgg ctcgggctgg ggtctcttgc tgcgagttag
     1021 cagagaagga cttcctgaca gtctctccct ctgaccagcg ttacagccag gtccagtaca
     1081 tcttgctgga tccttcttgt agtggctctg gcatgctgag ccggcagctg gaggaacatg
     1141 gggaaggcac acctagcaag gagcgcttgc aggccttggc cgggttccag cagcgggctc
     1201 tgtgccatgc acttaggttc ccctctctgc agcgcctagt ctactccacg tgttcccttt
     1261 gccaagaaga gaatgaagac gtggtccagg aggctctaca gcacaactcg gggacattca
     1321 ggttggctcc tgtcctaccc acatggcctc accgaggtct gagtaccttt ccagggtctg
     1381 aacactgcct ccgggcttcc cctgagacca cgctcactgg tggcttcttc attgctgtgt
     1441 ttgaacgtgc agaggtggta ccaaccccag ccccacagac cgatgcaatg gatccagaac
     1501 ctctcagcca agtcccaaag agaaagagaa gacgcaaagc agcagttggt gccagcatgc
     1561 agccaagcac ataggcactg agtgccccac agccagcaga accatgctta ctgtgggaac
     1621 cctgctcttc tgggaaggga agatgatgtc ctggcactct gtgtccctca ctgggcccag
     1681 tcctaccagt cacgagttct tcgcttcaca aataaagggc aaactcacat ctatgacaga
     1741 tcacagtttt atttttaatg acataagcaa gaacaatctc acattcatac taaaaatctc
     1801 agctacactc acaggaactc agtctgtggt gggaagcccc agcctccctg tccctgtcca
     1861 gcgtgagcac ggacaaatgt gctcacacac cgaggctact ccaggatgcc tccgcagggg
     1921 ccctggatac aggcctgctg tggagctgag gtaattagct cagactgaat tgcagggagg
     1981 ccccttcctt acctgaggca caggtagagg cttcgtgttc agacccccac ccatccccat
     2041 cctcacaggc atttgggacc tgaggtcaag ctcttctcca gctccacaca acccagccta
     2101 acccctgcca taaaacattc aatcccagtc acaaagggaa ggggaccagg gacagctaca
     2161 tcacactgtt tataaaagaa gaatcacact tatacgacat gtctagaagg agctctgccc
     2221 ccttagggga gctgctgggg acagctgtga gcccctcctt cacacaggca taactataca
     2281 gctaattcta ctattcaata gcatttatac ttaaccacct cagtgaacca agcttgaagg
     2341 aattttaaag gcaatttagc ttaaatacaa aaataaattt tattttgtta aaaaa
//
