LOCUS       XM_006498202            2795 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NMDA receptor synaptonuclear signaling and
            neuronal migration factor (Nsmf), transcript variant X3, mRNA.
ACCESSION   XM_006498202
VERSION     XM_006498202.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006498202.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..2795
                     /gene="Nsmf"
                     /gene_synonym="Jacob; Nelf"
                     /note="NMDA receptor synaptonuclear signaling and neuronal
                     migration factor; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 19 ESTs, 1426
                     long SRA reads, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     43 samples with support for all annotated introns"
                     /db_xref="GeneID:56876"
                     /db_xref="MGI:MGI:1861755"
     CDS             244..1683
                     /gene="Nsmf"
                     /gene_synonym="Jacob; Nelf"
                     /codon_start=1
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X3"
                     /protein_id="XP_006498265.1"
                     /db_xref="GeneID:56876"
                     /db_xref="MGI:MGI:1861755"
                     /translation="MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGA
                     DHLLADAYSGHDGSPEMQPAPQNKRRLSLVSNGRYEGSISDEAVSGKPAIEGPQPHVY
                     TISREPALLPGSEAEAIELAVVKGRRQRERHPHHHSQPLRASPGSSREDISRPCQSWA
                     GSRQGSKECPGCAQLVPGPSSRAFGLEQPPLPEAPGRHKKLERMYSVDGVSDDVPIRT
                     WFPKENLFSFQTATTTMQAISNFRKHLRMVGSRRVKAQSSDLQSSHCTLDEACEDLDW
                     DTEKGLEAMACNTEGFLPPKVMLISSKVPKAEYIPTIIRRDDPSIIPILYDHEHATFE
                     DILEEIEKKLNIYHKGAKIWKMLIFCQGGPGHLYLLKNKVATFAKVEKEEDMIHFWKR
                     LSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRTLMTPYKVTFESPLELSAQGKQ
                     MIETYFDFRLYRLWKSRQHSKLLDFDDVL"
ORIGIN      
        1 gggtggtgcc aactcaggct cagcgtcagg aggcggagca ccgcccccgg gtccagccgc
       61 gctctcctac agtggctgga cgcgctgggc gctgggtgcg gccatgcggg gcctgggcct
      121 aagtctgacc ctgaccctga ggctgagacc tagcgcgacc tcaggcgccg tacggctccc
      181 ccggcagagg cggcgggcgc gaggcgcgct ctgaaatccg ggggatgcgc gggcgccgtg
      241 accatgggtg ccgccgcctc caggaggagg gcgctgagga gcgaggccat gtcctcggta
      301 gcggccaaag taagagcagc ccgagcgttt ggagagtacc tgtcccagag tcaccctgag
      361 aaccgcaacg gtgcagacca cctgctggct gacgcctact ctggccacga cgggtcccca
      421 gagatgcaac ctgcacccca gaacaagcgc cgcctctccc tcgtctccaa tggccgatat
      481 gagggcagca tctcagatga ggcagtcagc gggaagccgg ctatagaggg cccccagccc
      541 cacgtgtaca ccatctctag agagcccgcc ctgctacctg gctctgaagc tgaagccatt
      601 gagctagcag tggtaaaagg gaggagacag cgggaacggc accctcacca ccacagccag
      661 cccctgcgtg ccagcccagg cagcagccgg gaggacatca gcaggccctg ccaaagctgg
      721 gcaggaagcc gccagggctc caaagagtgc ccaggatgtg cccagctggt ccctggtccc
      781 tcttctcggg cctttgggct ggagcagcca cctctacctg aggctcctgg ccgccacaag
      841 aagctggaaa ggatgtatag cgttgatgga gtgtctgatg atgtccccat ccgtacctgg
      901 ttccccaagg aaaacctttt cagcttccag acggcaacca caactatgca agccatctcg
      961 aacttccgca aacacctgcg catggttggc agtcggcggg tgaaggccca gagcagtgac
     1021 ctacagagct cacactgcac cctggatgag gcttgtgagg acctggactg ggacacagag
     1081 aaaggtctgg aggccatggc ctgcaacacc gagggcttct tgccacccaa ggtcatgctc
     1141 atctcctcca aggtgccaaa ggccgagtat atccctacta tcatccgcag agatgacccg
     1201 tccatcattc ccatcctcta cgaccacgag catgcaacct tcgaggacat cctggaggaa
     1261 atagagaaga aattgaacat ctatcacaag ggggccaaga tctggaagat gctgattttc
     1321 tgccagggcg gccctggaca cctttatttg ctcaagaaca aggtggccac ctttgccaaa
     1381 gtggagaagg aagaggacat gatccacttc tggaagaggc tgagccgcct gatgagcaag
     1441 gtgaaccccg agccgaatgt catccacatc atgggctgct acattctggg gaaccctaac
     1501 ggggagaagc tattccagaa cctcaggacc ctcatgaccc cttacaaggt tacctttgag
     1561 tcgcctctcg agctgtctgc ccaagggaag cagatgattg agacctactt tgacttccgg
     1621 ctgtaccgcc tgtggaagag ccgccagcac tcaaagctgc tggactttga tgacgtcctg
     1681 tgagaagcat gggtcatgcc caggaaccac caggccattt cctctgggct ggggacctag
     1741 agctgggctg cctcttgcac ccgggacagt gtggccctgc tcttgcccac agccacttca
     1801 gggaccctca gacgttgctc aggttctcgt agggtctggt cctcactgca ccagtgggcc
     1861 acagaggcca cactcctggt ggtccagatt aacaatctca gcccatgacc agtggcctct
     1921 caatggccag ggcattgacc tgtcatgcct cgcctggagg cagcagcatt ggggatcccc
     1981 tccatggggt tcatagaaat aagtgcaatt tttttacacc cctgaaacaa tttgaaggga
     2041 agcagcatta ctaattaact agttaagcac tctgctacta gttacagtgt agacaaccag
     2101 cccagtgtgt gttcaggtcc tcctgtcccc cagcctctca gccctgctgt atttgatcac
     2161 cagcaccagg atggcccata agtgtggggc tagctctgtc aggctgccta gcctggccca
     2221 gtctacactg gccaaatctg gcctgctttc acccttttgt cacccctggc ttactttgac
     2281 ctcatcctgg caaggggtag gctgggcagt taggagggaa gagcctcact caccctccct
     2341 cttgtcaggg gagcactggg ttgccatctg ttgcccacct cctcaagcca acccatttcc
     2401 ctttgctgct gctgaactcg gctttttcta gccttggtct ggaagccaca tcccagcaca
     2461 gtggcttagg ggtgtggtgg ggacagccgg ggctgggcct gggaaggcaa gaacctcacc
     2521 agcattgtgg tggggggcct agatctgtca ccccaggctg gagagtcaag tagctggtga
     2581 actgtgaggt ccccatgact cccttcagtc ttgtccaggg tctagcaggg tgggctctct
     2641 tgtacatagt tggagcttgg gggcaggccc cccttttgta gagcctgggg tctggggaca
     2701 cctggccgtg tccctgaccc aggggagtta ggattgggca ctgaacaatg tacgatatcc
     2761 cttagagtga ccattaaact tgaccctctg ctgca
//
