LOCUS       NM_020610               3913 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus nuclear receptor interacting protein 3 (Nrip3), mRNA.
ACCESSION   NM_020610
VERSION     NM_020610.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Hung,C.H., Lee,T.L., Huang,A.Y., Yang,K.C., Shyu,Y.C., Wen,S.C.,
            Lu,M.J., Yuan,S. and Shen,C.J.
  TITLE     A Positive Regulatory Feedback Loop between EKLF/KLF1 and TAL1/SCL
            Sustaining the Erythropoiesis
  JOURNAL   Int J Mol Sci 22 (15), 8024 (2021)
   PUBMED   34360789
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3913)
  AUTHORS   Thompson,C.L., Ng,L., Menon,V., Martinez,S., Lee,C.K.,
            Glattfelder,K., Sunkin,S.M., Henry,A., Lau,C., Dang,C.,
            Garcia-Lopez,R., Martinez-Ferre,A., Pombero,A., Rubenstein,J.L.R.,
            Wakeman,W.B., Hohmann,J., Dee,N., Sodt,A.J., Young,R., Smith,K.,
            Nguyen,T.N., Kidney,J., Kuan,L., Jeromin,A., Kaykas,A., Miller,J.,
            Page,D., Orta,G., Bernard,A., Riley,Z., Smith,S., Wohnoutka,P.,
            Hawrylycz,M.J., Puelles,L. and Jones,A.R.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   4  (bases 1 to 3913)
  AUTHORS   Kay,J.N., Chu,M.W. and Sanes,J.R.
  TITLE     MEGF10 and MEGF11 mediate homotypic interactions required for
            mosaic spacing of retinal neurons
  JOURNAL   Nature 483 (7390), 465-469 (2012)
   PUBMED   22407321
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 3913)
  AUTHORS   Hutchins,J.R., Toyoda,Y., Hegemann,B., Poser,I., Heriche,J.K.,
            Sykora,M.M., Augsburg,M., Hudecz,O., Buschhorn,B.A., Bulkescher,J.,
            Conrad,C., Comartin,D., Schleiffer,A., Sarov,M., Pozniakovsky,A.,
            Slabicki,M.M., Schloissnig,S., Steinmacher,I., Leuschner,M.,
            Ssykor,A., Lawo,S., Pelletier,L., Stark,H., Nasmyth,K.,
            Ellenberg,J., Durbin,R., Buchholz,F., Mechtler,K., Hyman,A.A. and
            Peters,J.M.
  TITLE     Systematic analysis of human protein complexes identifies
            chromosome segregation proteins
  JOURNAL   Science 328 (5978), 593-599 (2010)
   PUBMED   20360068
REFERENCE   6  (bases 1 to 3913)
  AUTHORS   Schilling,K. and Oberdick,J.
  TITLE     The treasury of the commons: making use of public gene expression
            resources to better characterize the molecular diversity of
            inhibitory interneurons in the cerebellar cortex
  JOURNAL   Cerebellum 8 (4), 477-489 (2009)
   PUBMED   19554387
REFERENCE   7  (bases 1 to 3913)
  AUTHORS   Amid,C., Bahr,A., Mujica,A., Sampson,N., Bikar,S.E.,
            Winterpacht,A., Zabel,B., Hankeln,T. and Schmidt,E.R.
  TITLE     Comparative genomic sequencing reveals a strikingly similar
            architecture of a conserved syntenic region on human chromosome
            11p15.3 (including gene ST5) and mouse chromosome 7
  JOURNAL   Cytogenet Cell Genet 93 (3-4), 284-290 (2001)
   PUBMED   11528127
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ400878.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK083130.1, SRR1660817.267382.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 57.49 cM"
     gene            1..3913
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /note="nuclear receptor interacting protein 3"
                     /db_xref="GeneID:78593"
                     /db_xref="MGI:MGI:1925843"
     exon            1..246
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..795
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /note="ICRFP703N2430Q5.2"
                     /codon_start=1
                     /product="nuclear receptor-interacting protein 3"
                     /protein_id="NP_065635.1"
                     /db_xref="CCDS:CCDS21739.1"
                     /db_xref="GeneID:78593"
                     /db_xref="MGI:MGI:1925843"
                     /translation="MFYSGLLTEGGRKETDMREAASLRQQRRMKQAVQFIHKDSADLL
                     PLDGLKKLGSSKDTQPHNILQRRLMETNLSKLRSTRVPWASKTNKFNQAKSEGLKKCE
                     DEDMILVSCQCAGKDVKALVDTGCQYNLISSACVDRLGLKDHVKSHKHEGEKLSLPRH
                     LKVVGQIEHLMITVGSLRLDCQAAVVDDNEKSLSLGLQTLRSLKCIINLDKHRLIVGK
                     TDKEEIPFVETVSVNDDNTSEA"
     exon            247..408
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     exon            409..491
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     exon            492..631
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     exon            632..684
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     exon            685..779
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     exon            780..3913
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3891..3896
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /note="hexamer: AATAAA"
     polyA_site      3912
                     /gene="Nrip3"
                     /gene_synonym="A330103B05Rik; D7H11orf14;
                     ICRFP703B1614Q5.2"
                     /note="major polyA site"
ORIGIN      
        1 gctgtccagg agctcgaggt tgaaggtgct tggcagggga cacccggccg cccggccgcg
       61 ggcgtttcag cgatgtttta ctcaggactc ctcaccgagg gcggccgcaa ggagacagac
      121 atgcgggaag cggcgtccct gcggcagcag cgccggatga agcaggcggt gcagttcatc
      181 cacaaggact cagccgacct gctgcccctg gacggcctca aaaagctggg ctcgtccaag
      241 gacacgcaac cccataacat tctgcagagg cgcctcatgg aaaccaacct gtctaagctc
      301 cggagcactc gtgtcccttg ggcctctaag accaacaaat tcaatcaggc taagtctgaa
      361 gggctgaaga agtgtgaaga tgaagacatg attttagtgt cttgccagtg tgctgggaag
      421 gacgtgaaag ctttggttga cactggctgt caatataatc tcatctcctc agcctgtgtg
      481 gacagattgg gactaaagga ccatgtcaaa tctcacaagc atgaagggga aaagctttct
      541 ctaccacggc atctcaaagt agttggccag attgagcacc taatgatcac agtgggttct
      601 ctccgtctgg attgccaagc agctgtggtt gatgataatg aaaaaagctt atcacttggt
      661 ctccagactc ttagatccct gaagtgcatc ataaacttgg acaagcaccg gctgattgtg
      721 gggaagacag acaaagaaga aatccctttt gtggagacag tttctgtgaa tgacgacaac
      781 acttcagaag cataattgca gcctgaagcg tgtgcgcatg tgcacacaca caccaggttg
      841 acagactgag aaaactgggt ttgaactaaa tacaatagca acttgctatg gaccaagtcc
      901 ttccctccag tacatcctgc aggggcttct tcccgctcag acctttttag actatagtct
      961 gtgcttagag atcttgtctg gttaatggct taatggttaa acagacattg ttttttactt
     1021 ctttgaatat ttaatttata gacctttttt gacactgcca ggtcttattt gtggcctatt
     1081 tctctgcttc ttccaagaat ttgcttttta ttaatcaatc cagtgtaggg gctgccaggt
     1141 tctacttctc catagataac acttgctttt tgaaaatatt aaaatataca gtaaatagga
     1201 actttctttc agctgtttca aagaggtata gaaacatgtc ttgactttag aatctcttct
     1261 gaagtaattg atttttccag tgtgaactta tctgaaagat gtttcagggg gatcatctgg
     1321 tccagacatt taatttaaac acacagacag gtaaattatc taaattcaca tattaagtca
     1381 tggcagaaga caagcagaat ccagacctga tatccaaacc aaggctctta tgctgctttc
     1441 tttgttttcc agccttaaga agaaggcagg aaggttaaag tgcaagaaag gaggggtaat
     1501 ggatgtggct ttgtggtggc ctgcttgtct aatgtacaca aggtcctggg ttccatcaca
     1561 gcactagaga tagagagatg gcttgtttat taagagtgct tgcttcataa gcatgaagac
     1621 tgccatttgg atcctagtac ccaaacaaaa gctgggcatt gtcccacaca cacctgagac
     1681 cccaatggaa ctttctagct tccagtctaa ccaaaagaga gagaggaata gacaggaaga
     1741 gggggagaat ggagggggag tgtctccaga gtccttgcct taaaggaacc aagtgaagtg
     1801 tggtagagga atagatgaca tgacacccac atgttcctct ggcctctgtg agtgtgcaca
     1861 ggtgcacagc tccatgcact catacaaatt cctacacaca ctcacagaca cacatggaca
     1921 cacaccacag ggaagatgag agggtgcaaa aacaggctac aaagatgaaa cagtctctca
     1981 atgaacaaga gaagaaagaa accacagata ggaaggcata ttattagttc ctgagacacc
     2041 actgacaatg tagttgtccc tgtgggatat tgattacccc taaggaccag tcagaatgtc
     2101 tgtctgtctt gttacatgtc acaaagattc aagtagctgg aagtagagat agggaaagga
     2161 aaaataaaaa ccacagtagt ccagaataga aggaagaggc agagtatgct gagtggggaa
     2221 gtctacctgg gagactttcc tgagactgaa atggggagtg aaccctccag gcagggaagt
     2281 aaaggctggc aagccctcgg tacagggaag ggagaaaggt agccggcagc attaagaacc
     2341 attaacagct ggatgtagca tatgccttta acaccagcac ccagaaggca gaggcagggg
     2401 caggcagata tgagaccagc ctggtctaca tagtgagttc caggccagtc agggagacgg
     2461 tctcaaaaga caaaaaaata aaaataaaaa taaaaaaaca aacaaagaaa ccagaataac
     2521 ctttaaaact gtccagtatt ccctgatctg acccatctca gtggactggg gaatcacagg
     2581 gttgcttttt aagcttttta aaattttttt tttatttttt attttgctat tgtatcttct
     2641 caggcataga ggtgcctata gtggaatctt cccttcagtt atagaaatat ttgacaattc
     2701 agaaaaaaaa gctaactgta agtaatcctt caagatattc ctaagtctac ccttggctca
     2761 tagcagttct caaacttcga atcttgtcta gtgtcccagc caccagcctg gccctgagag
     2821 ctcccttgtg tgggaggaac ctgcaccttc ctgaggctcc ctgcactttt gttcatcaca
     2881 gcagcagact gcaggctcct tctagtgtct ctggttggat ttcctggggg ccagtaaggc
     2941 caggacttct caggttcttg aaagaggcat tgattttggc ctttttcagt tgggtactat
     3001 atggtaccag gatgaataca tggcctttaa tgttccttct tgactctgac aagcagtcag
     3061 ttattttcta atctgggaat agaaccaatg ggtgaactgg actccatgtc atagctcact
     3121 cagttcattc tcaccatctg aatcttctaa ccaaattact tgagtcccta ggtataatag
     3181 agatacccaa aatgcttcaa gataactata ggaagtcttg gggtttagta atgctttttt
     3241 gttttgttta tgagacagga tcttattatg tgggctaggc tggcctgaaa ctcaatatgt
     3301 agatgagaca agcctcaaac tcatagaaat cagcctgcct gtgactcgtc attgatgctt
     3361 tttaaatgct gccaagttaa ctactcttac agtttctgtc tcttcagtgt tcacaaaggg
     3421 acactagctt tgcttttggg ggctagcaaa gtaggtcact gggtttttcc tagttagaaa
     3481 atggtagcat ttcttagggt gtaataaagt gtctgctgta tcctagttct aagtccctgg
     3541 gaagtagcag acctgtctca ctccttaaca cacaccgcat ccaggaagct gaagatgcac
     3601 atccagggat ttccatttta atttgaggaa gggatgtctt ctgactttcc tttttccttg
     3661 ctctgcacat acccctctag tatggttttc tgttccttag ctcagagcat ctatagactg
     3721 gattacctag ctgcccttac tcttgtgtag tagaaatacc tttcaggctg gggacttgga
     3781 ggagaggaac tggattcctc cctccttctg ttgccaggtc tttctgcatt agcactttat
     3841 ctgctcagta tttctgactg tactgggctt atttgtgaca ccgatatatc aataaagtgg
     3901 acttgttctc tgt
//
