LOCUS       NM_001162858            1642 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus nuclear receptor interacting protein 2 (Nrip2),
            transcript variant 1, mRNA.
ACCESSION   NM_001162858
VERSION     NM_001162858.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Hou,Q., Le,W., Kan,S., Shi,J., Lang,Y., Liu,Z. and Chen,Z.
  TITLE     Nuclear Receptor Interacting Protein-2 Mediates the Stabilization
            and Activation of beta-Catenin During Podocyte Injury
  JOURNAL   Front Cell Dev Biol 9, 781792 (2021)
   PUBMED   35004680
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Thompson,C.L., Ng,L., Menon,V., Martinez,S., Lee,C.K.,
            Glattfelder,K., Sunkin,S.M., Henry,A., Lau,C., Dang,C.,
            Garcia-Lopez,R., Martinez-Ferre,A., Pombero,A., Rubenstein,J.L.R.,
            Wakeman,W.B., Hohmann,J., Dee,N., Sodt,A.J., Young,R., Smith,K.,
            Nguyen,T.N., Kidney,J., Kuan,L., Jeromin,A., Kaykas,A., Miller,J.,
            Page,D., Orta,G., Bernard,A., Riley,Z., Smith,S., Wohnoutka,P.,
            Hawrylycz,M.J., Puelles,L. and Jones,A.R.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   3  (bases 1 to 1642)
  AUTHORS   Fouillade,C., Baron-Menguy,C., Domenga-Denier,V., Thibault,C.,
            Takamiya,K., Huganir,R. and Joutel,A.
  TITLE     Transcriptome analysis for Notch3 target genes identifies Grip2 as
            a novel regulator of myogenic response in the cerebrovasculature
  JOURNAL   Arterioscler Thromb Vasc Biol 33 (1), 76-86 (2013)
   PUBMED   23117660
REFERENCE   4  (bases 1 to 1642)
  AUTHORS   Shimogori,T., Lee,D.A., Miranda-Angulo,A., Yang,Y., Wang,H.,
            Jiang,L., Yoshida,A.C., Kataoka,A., Mashiko,H., Avetisyan,M.,
            Qi,L., Qian,J. and Blackshaw,S.
  TITLE     A genomic atlas of mouse hypothalamic development
  JOURNAL   Nat Neurosci 13 (6), 767-775 (2010)
   PUBMED   20436479
REFERENCE   5  (bases 1 to 1642)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   6  (bases 1 to 1642)
  AUTHORS   Greiner,E.F., Kirfel,J., Greschik,H., Huang,D., Becker,P.,
            Kapfhammer,J.P. and Schule,R.
  TITLE     Differential ligand-dependent protein-protein interactions between
            nuclear receptors and a neuronal-specific cofactor
  JOURNAL   Proc Natl Acad Sci U S A 97 (13), 7160-7165 (2000)
   PUBMED   10860982
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC116573.7.
            
            On Aug 24, 2022 this sequence version replaced NM_001162858.1.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134689.1, SRR17784648.1276141.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164136
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-506               AC116573.7         180793-181298
            507-656             AC116573.7         185932-186081
            657-739             AC116573.7         187487-187569
            740-861             AC116573.7         188351-188472
            862-914             AC116573.7         188683-188735
            915-1642            AC116573.7         189202-189929
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 62.99 cM"
     gene            1..1642
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /note="nuclear receptor interacting protein 2"
                     /db_xref="GeneID:60345"
                     /db_xref="MGI:MGI:1891884"
     exon            1..506
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     exon            507..656
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     exon            657..739
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     exon            740..861
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     exon            862..914
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1642
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1620..1625
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /note="hexamer: AATAAA"
     polyA_site      1642
                     /gene="Nrip2"
                     /gene_synonym="NIX1"
                     /note="major polyA site"
ORIGIN      
        1 actctgagca ggaccccaga gctgcaggct ttgcagccta ccagctgcag gccctgctcg
       61 ccctccctct cctttagggc tgggtttttc cagccggaac ctcgctccct ctactgcaat
      121 ctctggaaac tggtgtctga cgcgctgctc tcgcctatta tttatttatt tcttcttttc
      181 ttcctgctga gaccctcctg tcagagggag agccgcagtc cggagacaga gaaaggcaga
      241 agctataggg ggagctggga gcaaaaagga ggtggagaga gactcccata caccctgtct
      301 gctttccaca gaagaccatg agcaccgggc aagaggccag gagagatgag ggagactcca
      361 ggaaagaaca ggaagcttcg cttcgggacc gagcccacct gagccagcag cgccaactca
      421 aacaggccac ccagttcttg cacaaggact cggctgacct gctgcccctg gacagcctca
      481 agagactcgg cacctctaag gacctgcagc cacacagtgt gatccaaaga cgcctggtgg
      541 agggaaacca gaggcggctt cagggggagt ctcccctgct gcaggccctg atccgtggcc
      601 atgacagcag caggaccagt gcgacacagg ttccagctct gctagtcaac tgcaagtgcc
      661 aggaccagat gcttcgagtg gctgtggaca cagggaccca gcacaaccag atttctgctg
      721 gatgtctcag gcgcctgggg ttaggaaaga gggtcccaaa agcccccggt ggggatgtgg
      781 cacctgagcc accaactcag gtagaacagc tggagttaga gctggggcag gagactgtgg
      841 catgctcggc ccaggtggtg gatgtggaca gccctgaatt ttgcctggga ctgcagaccc
      901 tgctctccct caagttggcc acctccctct ctgcttcttc attgctgcct tctgccctag
      961 gaattcctac cgagagtatc tgtgactctg aggccctggt tccccattct ctcttatccc
     1021 ttcccaagtg cacaaccaag tcacttacag aaaaggacct ccagcaaatg ggctctagac
     1081 ttcaccctgg ctgtagaggt caaagttacc tactgcctcc actggcctga agcccatccc
     1141 aacctggcct tcctcacaca tgccccttta atcctgtacc catctgctta cagctgggtg
     1201 ggggtgacaa gtaagtagga cttggtctag aaggtacagc ccctgagctg agggcctgcg
     1261 gtcagtagcc tttctgggtg gcagatgtct gggtgtctga ctggtcagcc tctcaaatcg
     1321 tggttagggg aagagagaca atgatatatc taacccaaac cagggaactg ggtcccttac
     1381 atgggaacta aatacaaagc ctataagcct atggtagacc aaagaggaac cagcatagaa
     1441 agtgtcactt tcttcacttt cttcactttc gagaggctct gggagtgggg ttcctggtct
     1501 ctttcctgac tcctccctca ttgcagcgct ttgagacaat gtccctccca gtctgcctcc
     1561 tactgctcca ttaaaggcag accagcccag ggcaggccct tagcctgctt ctgcatctga
     1621 ataaacacag tttctatgcg ca
//
