LOCUS       NM_213733               2110 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus aminopeptidase-like 1 (Npepl1), transcript variant 2,
            mRNA.
ACCESSION   NM_213733 XM_110411
VERSION     NM_213733.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU148687.1, AK150313.1 and BX517579.1.
            
            On Apr 28, 2009 this sequence version replaced NM_213733.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC069933.1, AK156136.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               BU148687.1         3-208
            207-2090            AK150313.1         208-2091
            2091-2110           BX517579.1         374-393
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 97.87 cM"
     gene            1..2110
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /note="aminopeptidase-like 1"
                     /db_xref="GeneID:228961"
                     /db_xref="MGI:MGI:2448523"
     exon            1..222
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..1647
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /note="isoform 2 is encoded by transcript variant 2;
                     probable aminopeptidase NPEPL1"
                     /codon_start=1
                     /product="probable aminopeptidase NPEPL1 isoform 2"
                     /protein_id="NP_998898.1"
                     /db_xref="CCDS:CCDS17148.1"
                     /db_xref="GeneID:228961"
                     /db_xref="MGI:MGI:2448523"
                     /translation="MASVGLQFQASAGDADPQSRPLLLLGQLQHLHRVPWSHVRGKLQ
                     PRVTEELWQAALATLNPNPTDSCPLYLNCATVAALPSRVSRHNSPSAAHFITRLVRTC
                     LPPGTHRCILMVCEQTEVFASACALARAFPLFTHRSGASRRAEKRTVMVEFFLVGQDN
                     GPVEVSTLQCLTNATEGVRLAARIVDTPCNEMNTDIFLEEIIQVGKELGITPTIIRDE
                     QLKTKGFGGIYGVGKAALHPPALAILSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTT
                     MPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENAVGPNATRPDDIHLLYSGK
                     TVEINNTDAEGRLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAE
                     WEAACVKAGRKCGDLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIAS
                     HIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDA
                     QEGDNMGRDSKRRRLV"
     exon            223..408
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            409..579
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            580..669
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            670..751
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            752..894
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            895..972
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1073
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            1074..1197
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1374
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1485
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..2097
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2076..2081
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /note="hexamer: ATTAAA"
     polyA_site      2097
                     /gene="Npepl1"
                     /gene_synonym="mKIAA1974"
                     /note="major polyA site"
ORIGIN      
        1 ggggcggcgc cgagccgggc cggagcaggg cgcagggtgc tgggcggccc ggccggggtc
       61 gtggggggga agatggcgag cgtggggctg cagttccagg ccagcgccgg ggacgcggac
      121 ccccagagcc ggcccctgct gctgttgggc cagctgcaac acctgcaccg cgtgccctgg
      181 agccacgtcc gcgggaagct gcagccccgg gtcaccgagg agctctggca ggcagctctg
      241 gccacgctca accccaaccc cacagacagc tgtcctctct acctgaactg cgccacagtg
      301 gcagctctgc cttctagggt gagccggcat aacagcccgt ccgcagccca cttcatcacc
      361 aggctcgtga gaacctgcct gcctcctgga acccaccggt gtatcctgat ggtctgcgaa
      421 cagactgagg tttttgcctc tgcctgtgcc ttggcacggg ccttcccact cttcacacac
      481 cgctcagggg catcccggcg cgcagagaag aggacagtca tggtggagtt cttcctggtg
      541 ggacaagaca atggcccagt ggaagtgtcc accttgcaat gtttaaccaa tgctacagaa
      601 ggtgtccgac tagcagctcg cattgtggac acgccgtgca atgagatgaa cacagacatc
      661 ttccttgagg agattatcca agttggaaag gagctgggta tcacccccac catcatccgc
      721 gatgagcagc taaagaccaa aggatttgga ggaatctatg gggttggcaa agctgccctc
      781 catccacccg ctctggccat ccttagccac acccctgatg gggccacaca gaccattgcc
      841 tgggtgggca agggcatcgt ctatgacacc ggcggtctca gcatcaaagg aaagaccact
      901 atgccaggga tgaagcgaga ctgtgggggt gcggcagccg tcctgggagc cttcagagcc
      961 gccatcaagc agggtttcaa agataacctc catgctgtgt tctgcttggc cgagaatgca
     1021 gttggaccca atgccaccag gccggatgac attcacctgc tgtactcggg gaagaccgta
     1081 gagatcaaca acacggatgc tgagggcagg ctggtgctgg cagacggggt gtcttacgct
     1141 tgcaaagacc tgggggctga catcatcgtg gacatggcca ccctgacagg ggcacaaggc
     1201 attgccacag ggaagtacca tgcagccgtg ctcaccaaca gcgccgagtg ggaggcggcc
     1261 tgcgtgaagg ctggccggaa gtgcggggac ctggtccacc cgctagtcta ctgccctgag
     1321 ctgcacttca gcgaattcac ctcggctgtg gctgacatga agaactccgt ggcggaccga
     1381 gacaacagcc ccagctcctg tgctggcctc ttcattgctt cacacatcgg gtttgactgg
     1441 cccggggtct gggtccacct ggacatcgct gctccagtgc atgctggcga gcgagccaca
     1501 ggctttgggg tggctctcct actggctctt tttggccgtg cctccgagga cccgctgctg
     1561 aacctggtat ccccgctgga ctgtgaggtg gatgcccagg aaggcgacaa catggggcgt
     1621 gactccaaga gacggaggct cgtgtgaggg ctacttccca gctggtgaca cagggttcct
     1681 tacctcattt tgcactgact gattttaagc aattgaaaga ttaactaact cttaagatga
     1741 gtttggcttc tccttccgtg cccagtggtg acaggagtga gccattcttc tcttagaagc
     1801 agcttagggg cttggtgggg tctggagaaa attgtcacag accccatagg tctccatctg
     1861 taagctctgt cccttgtcct ccaccctggt ctttagagcc acctcaggtc accctctgta
     1921 gtgagtgtac ttcctgaccc aggcccttgc tcaagctggg gctccctggg gtgtctagcc
     1981 agccctgggt agatgtgact ggctgttagg gaccccattc tgtgaagcag gagaccctca
     2041 cagctcccac caacccccag ttcacttgaa gttgaattaa atatggccac aacataaaaa
     2101 aaaaaaaaaa
//
