LOCUS       NM_026579               3535 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus NOP protein chaperone 1 (Nopchap1), mRNA.
ACCESSION   NM_026579
VERSION     NM_026579.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3535)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   2  (bases 1 to 3535)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   3  (bases 1 to 3535)
  AUTHORS   Honarpour,N., Gilbert,S.L., Lahn,B.T., Wang,X. and Herz,J.
  TITLE     Apaf-1 deficiency and neural tube closure defects are found in fog
            mice
  JOURNAL   Proc Natl Acad Sci U S A 98 (17), 9683-9687 (2001)
   PUBMED   11504943
REFERENCE   4  (bases 1 to 3535)
  AUTHORS   Schriml,L.M., Peterson,R.J., Gerrard,B. and Dean,M.
  TITLE     Use of denaturing HPLC to map human and murine genes and to
            validate single-nucleotide polymorphisms
  JOURNAL   Biotechniques 28 (4), 740-745 (2000)
   PUBMED   10769753
REFERENCE   5  (bases 1 to 3535)
  AUTHORS   Knopp,E.A., Arndt,T.L., Eng,K.L., Caldwell,M., LeBoeuf,R.C.,
            Deeb,S.S. and O'Brien,K.D.
  TITLE     Murine phospholipid hydroperoxide glutathione peroxidase: cDNA
            sequence, tissue expression, and mapping
  JOURNAL   Mamm Genome 10 (6), 601-605 (1999)
   PUBMED   10341094
REFERENCE   6  (bases 1 to 3535)
  AUTHORS   Ko,M.S., Threat,T.A., Wang,X., Horton,J.H., Cui,Y., Wang,X.,
            Pryor,E., Paris,J., Wells-Smith,J., Kitchen,J.R., Rowe,L.B.,
            Eppig,J., Satoh,T., Brant,L., Fujiwara,H., Yotsumoto,S. and
            Nakashima,H.
  TITLE     Genome-wide mapping of unselected transcripts from extraembryonic
            tissue of 7.5-day mouse embryos reveals enrichment in the t-complex
            and under-representation on the X chromosome
  JOURNAL   Hum Mol Genet 7 (12), 1967-1978 (1998)
   PUBMED   9811942
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY149759.1 and BC035946.1.
            
            On Jun 19, 2009 this sequence version replaced NM_026579.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK128995.1, AK147063.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                BY149759.1         3-45
            44-3535             BC035946.1         1-3492
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 41.16 cM"
     gene            1..3535
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /note="NOP protein chaperone 1"
                     /db_xref="GeneID:28109"
                     /db_xref="MGI:MGI:106381"
     exon            1..153
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /inference="alignment:Splign:2.1.0"
     exon            154..240
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /inference="alignment:Splign:2.1.0"
     exon            241..377
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /inference="alignment:Splign:2.1.0"
     exon            378..3509
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3488..3493
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /note="hexamer: AATAAA"
     polyA_site      3509
                     /gene="Nopchap1"
                     /gene_synonym="C430041I18Rik; D10Wsu102e"
                     /note="major polyA site"
ORIGIN      
        1 tatatccggg cttctttcag tggcgctggg ttggaagcat ggagttccag ggcgagcgcg
       61 ggaccggtcc tggtgtttct tcgtcttctg tagcctgctc gcaggtcacg gtgtccaggg
      121 agctgctgac ggcggggagc gagggttcgg gaggtatctg ggaccagttg ctcatcagct
      181 ctaagcctca tcccagaaag acctctacac ttcaaacagt tcggatgcag aggagccctt
      241 tgctagacca ggttcaggcc ttcctcccac aaatggccca ggcaaatgag aagctgagga
      301 gggaaatggc agctgctcca gctggtcact tcaatattga aaacatcgac gagacgtctg
      361 gaaacatcat acagatggat gtggccttat ttgagatgag tcggtcagat tcaaaagagg
      421 aggatagccc agaagagagc tctcgggaca gttctgggga cagctcggag tccgaagaag
      481 atgtctgcgt tccctctgaa gtcaccatcg agaacattaa gcttccgaat gcagaaggtg
      541 gcaaaggcaa gattgaaatt ttggacagtc cggcaagtaa aaaaaagaag cagtgaaatg
      601 acccacatgg aaggagcagg cacttccccg cctgggggcc aggggcaggg cggcctgttc
      661 cgatcagctg ttgtccttac gtgtcacaaa gaatcatgaa cccaggtgta ttttacatag
      721 aaagtgctca gagcttggac gcagagagcg tagtgctctt ggacactgag aaaggaaata
      781 agaaatgaca atattggttg atgcagatgt ttgctctaga gtgtgggctg taactcttga
      841 ctcatctaca ctgaaatgta gctattggtt acaagattcc cactgccagt ttggggtttt
      901 ggtatgtttt atatcaaggc aggttgcagt ttgttatgta tgaactgggt actagagaca
      961 agcccaggat gacagccccc tgccatttaa ggtgtgacgg tgcctatatt cagttcagga
     1021 aaacccaagc tgccttttaa agatttgtaa gggatagcag ttgacatcct tttagagcag
     1081 attgatcttt gctccttctg tgaagagagt ttagaaacaa ctatgtgcta tgtcactgtc
     1141 ttgtgtgtga gtgtgaagtc atgtaaaatt gtcatttcaa attataatgc tactgacagc
     1201 ccgaggaatg cctccagttc tagtaagctt acagtgtgga tgacctgtag ctgtttcact
     1261 gactaaccag tcttagatga tgttatcagg gttagcaagt gccagcagcg ggaagacgag
     1321 cggtctgttc aggaggctac ttgagtagag gaaccatgtc cctgtgactt ggaggagatg
     1381 gtaacacccc tgtcgtttat cctggtggtt tgccgtacca tgtgatactt catctttgcc
     1441 acctctgagc cagggtctct gattggtcct ggaagctact gttccacagt catgctgggt
     1501 tagggcatca agcctggact acagttttcc caccctctag cacttctcac cctctgtacc
     1561 ttcctccata gtccctgagc ccctagaaag aaaaaggtat cctggtcatt ttcctcctga
     1621 gaacagagca gagtaaaatg ttcaaggcac gcataactac ctgactgaag agagtctgcc
     1681 gtgtataggt cagatcatca tgggttacaa tccttgctgc ccagtggaag aggttcccct
     1741 cggtgactag ttgatagcct cagtatgact gatccccata ttcagaggat aattgtcttt
     1801 tttatttctg tgaagagacg cttcatgacc aaggcaaata gtaagtgttt aactgcgggc
     1861 ttcctttcag tttgagagtc tatgacattc tgggggaaat gtggggatgg gcagggcacc
     1921 aggcagagca gagcagtgta taagactggg cctagctggg cttttgaaac ctcagaagtc
     1981 tgtccatctc tcctccctcc cccgtccagt gacatacctt ttccaacaag gctcctaatt
     2041 cttcctaaac tgtccgccaa ctaggaacca aacattaaaa tctgtaagga ccattctcat
     2101 ttaaacaatc acagtgattg attgggtacg tacgtgtttg gacataggat tgtctttagc
     2161 tcgaggttgg agggggctag acagacagtt gggagatggt taactgtggg cagattgaag
     2221 caccacagaa cctgctgttc ctgtgggaca cacaggtagt ggaggacttg ggagcctcag
     2281 ccaagtgagg ctgtaagagt tggcttcccc tcggggcctg aacaacagcc tctgacactg
     2341 aatgctaact gctcgggatt ggggtagtgc tttcttgtgt aagcccaggt tggtattctg
     2401 gtctcctgaa gtcagcattt ggcgtcctta gcagtagggg tgaccattta gctctagtac
     2461 acacacaagt atagtgacag tagtcacttc tgggatctat ctccctggcc aacaactcac
     2521 aggaaactag accaccaccc tgggattgga gtttttactt aattaacaac cctgcagttg
     2581 ctggaagcac tctatgcacg tgtaatgaac agctgccgtt taaatatatg tgccatttct
     2641 gtagtctgga tttttttttc ctttttttgg tggcatgtta cagtcttggc aaaaagttct
     2701 cttcacacat tcctttttgt atatactgat tttactgttg gtgaagcaca tctgaccaag
     2761 ccagttcagt cagtcagcag ggtctccagg gagtgaggat tgaggagaaa acgttagaca
     2821 gcatgatcac ctgactccac cctgtcctga gactgaagca gcttcatttc tctccagcct
     2881 gctttatatc ctcctaggtg catccaaaaa acgtggtcag ctcttagagc aaagacaaag
     2941 taagcaagcc aagtagtgaa caagaagatc acttagggta gtaagtaacg tagtaggcaa
     3001 ggagatggcc gaaggtggtg gtaaagtccc atggtcactg tttctaatat tcttatctga
     3061 gcatactttc ttgttggagc ccagggagaa atgccaaatt ctagaagcag caccaaaagc
     3121 cctcaataca catcctgcta gattccacct gctttggggt ttctctctgt ggctaacaat
     3181 tgctccagta ttattttgta cattgggctt acctttcttc atgacaggga tatgaaaccc
     3241 attggaactg tctgttaagt ggttttatgt cttgtccccc agccctagga cccgttactt
     3301 ctaaggtaaa cattgggaca ctaagcacac agttgcttaa gctgtcccac tccctaaccc
     3361 accccctccc caaaatctac tttttgaggg agagcgtcat attgaaggaa gttgtaggag
     3421 ttgaaggggg tgtcggggtg ccaatgatca agatggattg tttacatgca tgaaattgtc
     3481 aaaaatgaat aaattctatt taaaccgtga aaaaaaaaaa aaaaaaaaaa aaaaa
//
