LOCUS       NM_026403               3828 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus NOP9 nucleolar protein (Nop9), mRNA.
ACCESSION   NM_026403 XM_990552
VERSION     NM_026403.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ098414.1, AK032873.1, AK146687.1 and AW700995.1.
            
            On Mar 7, 2008 this sequence version replaced NM_026403.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146687.1, AK154387.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                CJ098414.1         2-18
            18-2255             AK032873.1         2-2239
            2256-3694           AK146687.1         2228-3666
            3695-3828           AW700995.1         6-139               c
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 28.19 cM"
     gene            1..3828
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /note="NOP9 nucleolar protein"
                     /db_xref="GeneID:67842"
                     /db_xref="MGI:MGI:1915092"
     exon            1..328
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..1992
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /note="pumilio domain-containing protein C14orf21 homolog;
                     pumilio domain-containing protein NOP9"
                     /codon_start=1
                     /product="nucleolar protein 9"
                     /protein_id="NP_080679.3"
                     /db_xref="CCDS:CCDS27126.1"
                     /db_xref="GeneID:67842"
                     /db_xref="MGI:MGI:1915092"
                     /translation="MGLGPRSAHKARRQFSGAGRRGRAARGSGRPPPGRDGYPRLPAA
                     ARAEQAPEALPHLSPEALGYFRRALSALKVAPDAAEERELMARNILKEVEAQALALAT
                     NRTGSEMLQELLGFSPLKPLCRVWAALRPNLRFVACHRCGVHVLQSALLQLPRLLRRP
                     AEAEEEEEEEEEGGPSQTLEELVLGLAAEVCDDFLFFCGDTHGSFVVRTLLQVLGGTL
                     LESERGKPRGSQSSETQRTSARECKPTDFEVPKTFLNRLQDLSACFLKDIAVFITDKI
                     SSFCLQVALQVLHQKLPQHCAHLCDAVIDYLSSRNSSADGSPLLLFLRDQTSSRLLEQ
                     VLLVLEAERLQRLYKDHFQGQLCSLAEHPIANFPLQRLLDAITSPELLSLVFEELSPA
                     LEMVLAQGHPGVVVALVEACRRVGTHQAQVLQLLFEAFHCAEPPSRQAACVPLFAALL
                     AYEVYYELMEEEGAVPAEHQVEMATARALREVTVLGSLLLQHLLYFSNPGLVLRSLSA
                     LTGPQLLTLAQSPAGSHVFDAILSSPSVTHKQRRRVLKTLKGQYVALACSRHGSRVLD
                     AIWSGAALGARKEIAAELGEKNQELIQDPFGHHVARNVALTTFLKRREAWEQQQSTVA
                     KRRRALSSILED"
     exon            329..778
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            779..889
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            890..1031
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1032..1224
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1365
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1366..1491
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1492..1728
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1729..1834
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1835..3828
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2258
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
                     /note="major polyA site"
     polyA_site      3698
                     /gene="Nop9"
                     /gene_synonym="2610027L16Rik"
ORIGIN      
        1 gacgtccccg tgcgtccgga gcgcgccggc ggttgtggga gctgcaaccg ggaagcgtga
       61 acggctggtc ccaaagcacg catggggttg gggccgcgtt ccgctcacaa agcgcgacgc
      121 cagttctcgg gtgccggccg gcggggacgc gcggcccggg gttcgggacg tccccctccc
      181 ggccgcgatg gttatccccg gctgccggca gccgcgcgtg cggagcaggc ccccgaggct
      241 ctcccgcatc tgagcccgga ggctcttgga tatttccgac gggcgctgtc agcgctaaaa
      301 gtggctcccg acgccgccga agaacgagag ttgatggcgc gcaatatttt gaaggaagtg
      361 gaggctcagg ctctagcctt ggccacgaac aggactggta gcgaaatgct gcaggagctt
      421 ttggggttca gtcctttgaa acccctgtgt cgagtgtggg ccgctctgcg ccccaacttg
      481 cgcttcgtgg cttgtcatcg gtgtggggtc cacgtattac aaagtgcttt gctgcagcta
      541 cctcgattgc tgaggcgtcc tgcggaggca gaggaggagg aggaggaaga ggaggagggt
      601 ggtccctcgc aaactctgga ggagctagtc ctgggactag ccgctgaagt gtgtgatgat
      661 tttctgttct tctgtggaga cacgcatggc agcttcgtgg tcagaactct gctgcaggtc
      721 ttgggaggta ctcttttgga gtccgagaga ggcaagcccc gtggctccca gtcgtctgaa
      781 acacagagga cttcagctcg ggaatgtaaa ccaactgatt ttgaggttcc taaaaccttc
      841 ttgaatcgcc ttcaggacct gagcgcctgc tttctgaagg acattgctgt atttatcacc
      901 gacaagatct ccagcttttg tcttcaggtg gccttacaag tcctccacca aaaattacct
      961 cagcactgtg cccacctctg cgatgcagtc attgattacc tgagttctcg gaattcttca
     1021 gcagatggca gccctctact cctgtttctt cgggatcaga cgagctctag actcttggag
     1081 caggtgctgc tggtattaga agcagagaga ctccagcgcc tctataagga ccacttccag
     1141 ggtcagctat gctccttggc tgagcatccc attgcgaact tccctttgca gcgcttgctg
     1201 gatgcaatca cttcccctga gctgctgtcc cttgtgtttg aggagctgag ccctgccttg
     1261 gaaatggtgc tggcccaggg ccacccaggg gtcgtcgtcg ccctggtgga agcctgccgc
     1321 agggttggga ctcaccaagc ccaggtcttg cagctgttat ttgaggcatt tcattgtgca
     1381 gagcccccgt cccggcaagc agcctgcgtg cctctctttg ctgctttgtt ggcttatgag
     1441 gtatactatg aactaatgga ggaggagggg gctgtgcctg cagagcatca ggttgaaatg
     1501 gccacagcca gagcgctgag ggaggtgact gtacttgggt ctctactgct ccagcatttg
     1561 ctgtattttt ctaatcctgg acttgtactt cgaagtctga gtgccttgac cggaccacag
     1621 cttctgactc tggcccaaag ccccgctggc tctcatgtat ttgatgccat cctgagtagc
     1681 ccctcagtga cacacaagca gcgtcgtcgt gtgctgaaga ccctaaaggg acagtatgtg
     1741 gctcttgcct gtagccgcca tggcagccgt gtattagatg ccatctggag tggagcagct
     1801 ttgggggctc ggaaggaaat tgctgctgaa ttgggagaaa agaaccagga gttgattcaa
     1861 gatccttttg gccaccatgt ggctcgaaat gtggccctta ctaccttctt gaagaggcga
     1921 gaggcttggg aacaacagca aagtactgtg gccaagcgga ggcgggcatt gagctctata
     1981 cttgaagact gagacttgca acgggactcg gtcttgatgg ggaggggaac atgcttaccc
     2041 ttcctgttta cattggatcc aaaagtctta ctgcagccag atgtagtaac atgcacaaaa
     2101 ctgtaaacct actattccag agggtaaaac aagaatatca agaattcaag gctagcctgc
     2161 tctgtggcag ctagatcttg ttaatctcta tgtccatctg ctattctctc ccctctccca
     2221 agacatactg gtaaagactt ttgtattttt cttggaaata tttttatttt attttttagg
     2281 ggaaagttat cttgtagtaa agctagggac agtggccgtt ggtatgcagg atcttagggg
     2341 taggcgtcag taagaaccta gatgaagcag cgattacggt gggatcagga tgcaggggac
     2401 aaggctgtgg ttctgcaggg tatgtggaag gcaggagtgg agggaagaca ggtagcattc
     2461 ttcaggaaga tgtacaggcc agaggaacaa ggcagtgtgc agatctgtta ggatggagtc
     2521 agcttggtta cctagggtac actgcagacc ccaagcctga tggtgccttt actaccctcc
     2581 tgtgtcacat ggaaccagtc tttcagcaca ggctcaaagc atgatctcat taggagtgga
     2641 ggtgtctctg cccgtgccac tgccatcgat cagccccctc caccacatgg cgaagggtgg
     2701 aggagatgcc cagcagcata tggcccaggc cttgcagcag cgaggaagtc caacggagga
     2761 gctccctgga gggcagagtg gagatcagag agttaaagga agctgcaagg aggtcggggt
     2821 tggatgcttt ggtgtggggg gctgataagg gggagtttat gggatacatg gatccgaggg
     2881 ttgcatgaca gattggtctc tgacctgagt actcttttag ggccaactcc ttggaaatca
     2941 cagctcatgg agtagagtcc atagaatgta gctttcacgt tgaggctgcc aaagaggtct
     3001 cggggatttt gcttgtacac atcgaaggtg atgcgggcga tgtccttgct gtgttttggc
     3061 ttctcccgtc ctaggccgta tgacaacatc ccactctgtg ggacattctc atcattgaag
     3121 tggacctgcc ctcataccct gggaaccacc actaatcctg tcagtgccgg atctgtcttc
     3181 ccaatgtcat ctaatggttg atgtccttca cagctcccca gagcctgtgc ccccacaggt
     3241 cagtggtagg ccagggaaga agccagggag gaccagaaag gagtggagac ctaagcagcc
     3301 ccactgtggg gctctcacct tggggctcca gctctggccc tgctcaagca ccatcaagca
     3361 cgtgtcgtcc tccagcagct ggaagaagtc ctcactgtcc acagcagtcc catcctcctc
     3421 caggaccagt gttagcactc cacgtagcag caaggtctcc aggacctgtc agtgacaaga
     3481 ggcaggaagg gaggccccgt cagcctcacg ctggttggca tatcagctct acctccaggt
     3541 gttttgccat cttccctgta ggggttttgt ttgtttattt ctttttttga gacagggtgt
     3601 tggtgtagtg cagcctgctc ccaaacttag caattctgtg ttagtttgct gggtcctggg
     3661 attgtagaca tgaacacttc atctcatcct tcctaaaagt tgcagttctt tctttgtgta
     3721 gctttggctg tcctggaact tggtctgtag accaggctgg cctcaaactc aagagagtca
     3781 ctggcctctg cctcccatgt tctgggatta aaagtatgtg agaccatg
//
