LOCUS       NM_018868               1976 bp    mRNA    linear   ROD 19-DEC-2022
DEFINITION  Mus musculus NOP58 ribonucleoprotein (Nop58), mRNA.
ACCESSION   NM_018868
VERSION     NM_018868.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Wang X, Li ZT, Yan Y, Lin P, Tang W, Hasler D, Meduri R, Li Y, Hua
            MM, Qi HT, Lin DH, Shi HJ, Hui J, Li J, Li D, Yang JH, Lin J,
            Meister G, Fischer U and Liu MF.
  TITLE     LARP7-Mediated U6 snRNA Modification Ensures Splicing Fidelity and
            Spermatogenesis in Mice
  JOURNAL   Mol Cell 77 (5), 999-1013 (2020)
   PUBMED   32017896
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Chung D, Gao F, Ostmann A, Hou X and Das SK.
  TITLE     Nucleolar Sik-similar protein (Sik-SP) is required for the
            maintenance of uterine estrogen signaling mechanism via ERalpha
  JOURNAL   Mol Endocrinol 26 (3), 385-398 (2012)
   PUBMED   22282469
  REMARK    GeneRIF: Sik-SP, an early estradiol-responsive nucleolar protein,
            is necessary to induce Eestradiol-dependent estrogen receptor
            alpha-mediated appropriate physiologic responses in the uterus.
REFERENCE   3  (bases 1 to 1976)
  AUTHORS   Hoffman BG, Zavaglia B, Witzsche J, Ruiz de Algara T, Beach M,
            Hoodless PA, Jones SJ, Marra MA and Helgason CD.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   4  (bases 1 to 1976)
  AUTHORS   Roma G, Cobellis G, Claudiani P, Maione F, Cruz P, Tripoli G,
            Sardiello M, Peluso I and Stupka E.
  TITLE     A novel view of the transcriptome revealed from gene trapping in
            mouse embryonic stem cells
  JOURNAL   Genome Res 17 (7), 1051-1060 (2007)
   PUBMED   17540781
REFERENCE   5  (bases 1 to 1976)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   6  (bases 1 to 1976)
  AUTHORS   Yang Y, Isaac C, Wang C, Dragon F, Pogacic V and Meier UT.
  TITLE     Conserved composition of mammalian box H/ACA and box C/D small
            nucleolar ribonucleoprotein particles and their interaction with
            the common factor Nopp140
  JOURNAL   Mol Biol Cell 11 (2), 567-577 (2000)
   PUBMED   10679015
REFERENCE   7  (bases 1 to 1976)
  AUTHORS   Marie-Cardine A, Kirchgessner H, Bruyns E, Shevchenko A, Mann M,
            Autschbach F, Ratnofsky S, Meuer S and Schraven B.
  TITLE     SHP2-interacting transmembrane adaptor protein (SIT), a novel
            disulfide-linked dimer regulating human T cell activation
  JOURNAL   J Exp Med 189 (8), 1181-1194 (1999)
   PUBMED   10209036
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK134286.1, AK044216.1 and AK034577.1.
            
            [WARNING] On May 5, 2023 this sequence was replaced by NM_018868.3.
            
            On Dec 29, 2006 this sequence version replaced NM_018868.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC076604.1, AK044216.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 AK134286.1         2-4
            4-1328              AK044216.1         1-1325
            1329-1670           AK134286.1         1330-1671
            1671-1886           AK044216.1         1668-1883
            1887-1976           AK034577.1         541-630
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1"
     gene            1..1976
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /note="NOP58 ribonucleoprotein"
                     /db_xref="GeneID:55989"
                     /db_xref="MGI:MGI:1933184"
     exon            1..221
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     CDS             177..1787
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /note="nucleolar protein 5; SIK similar protein; NOP58
                     ribonucleoprotein homolog"
                     /codon_start=1
                     /product="nucleolar protein 58"
                     /protein_id="NP_061356.2"
                     /db_xref="CCDS:CCDS35587.1"
                     /db_xref="GeneID:55989"
                     /db_xref="MGI:MGI:1933184"
                     /translation="MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKL
                     KHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKL
                     NLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDT
                     MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYA
                     SASLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQ
                     NRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRD
                     TPKYGLIYHASLVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLE
                     ARLRILEDRGIRKISGTGKALAKAEKYEHKSEVKTYDPSGDSTLPTCSKKRKIEEVDK
                     EDEITEKKAKKAKIKIKAEVEEEMEEEEAEEEQVVEEEPTVKKKKKKDKKKHIKEEPL
                     SEEEPCTSTAVPSPEKKKKKKKKKDAED"
     exon            222..298
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            299..351
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            352..473
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            474..610
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            611..675
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            676..810
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            811..956
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            957..1083
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1084..1247
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1248..1382
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1383..1444
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1445..1578
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1579..1736
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
     exon            1737..1976
                     /gene="Nop58"
                     /gene_synonym="MSSP; Nol5; nop5; SIK"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggagaggt gtggagcggc tgagcaacgt ggtctgttcg tccgcgggga ggcgacggcg
       61 tttgcgctcc cccgcgtcca aggcctagcg ggtcttcagc gactgaaagg tagtcatttg
      121 cagtggcgta agggctcgcg gctagccgcg tagcgccgcc ctgacctggt ctcatcatgt
      181 tggtcctgtt tgaaacgtcc gttggctacg ccatctttaa ggttctgaat gagaagaaac
      241 ttcaagaggt tgatagtttg tggaaagaat ttgaaactcc agagaaagca aataaaatag
      301 taaagctaaa acattttgag aaatttcagg atacagcaga agcattagca gcattcacag
      361 ctctgatgga aggcaaaatc aataaacagc tgaagaaagt tttgaagaaa atagtaaaag
      421 aagcccatga acctctggct gtcgctgatg ctaaactagg aggggtaata aaggaaaaat
      481 tgaatctcag ctgtatccat agtcctgttg ttaatgaact tatgagagga atccgatcac
      541 aaatggatgg cttgattcct ggggtagaac cacgtgagat ggcagccatg tgtcttggat
      601 tggcccacag cctgtctcga tacagattga aattcagtgc tgataaagtg gacacaatga
      661 ttgttcaggc aatttcctta ttagatgact tggataaaga actaaacaac tacattatgc
      721 ggtgtaggga atggtatggc tggcatttcc ctgagttagg gaaaattatt tcagataatc
      781 tgacatactg caagtgttta cagaaagttg gggacaggaa gaactatgca tctgcctctc
      841 tctctgaatt cctgtctgag gaagtagaag cagaagtgaa agcagctgca gagatatcta
      901 tgggaacaga ggtttctgaa gaagatattt gcaacattct acatctgtgt acgcaggtaa
      961 ttgaaatttc tgaatatagg actcagctct atgaatatct gcaaaatcga atgatggcca
     1021 ttgcacctaa cgttacagtc atggttggag aattagttgg agcacggctt attgctcatg
     1081 caggttctct tttgaatttg gccaagcatg cagcttctac agttcagatt cttggagcag
     1141 aaaaagcact tttcagggcc ctcaaatcta gacgagacac acctaaatat ggacttattt
     1201 atcatgcttc tcttgtaggc cagtcaagtc ccaaacacaa aggaaagatt tctcgaatgc
     1261 tggcagccaa aactgttctg gctatcagat acgacgcttt tggtgaagat tccagttctg
     1321 caatgggaat tgagaacaga gccaaattag aggccaggtt gaggattttg gaggacagag
     1381 ggataagaaa aataagtgga acaggaaagg cattagcaaa agcagaaaag tatgaacaca
     1441 aaagtgaagt gaagacttac gatccctctg gtgactccac acttccaact tgttctaaaa
     1501 aacgcaaaat agaagaggta gataaagagg atgaaattac tgaaaagaaa gcaaaaaaag
     1561 ccaagattaa aattaaagct gaagtagagg aggagatgga ggaggaggag gcggaggaag
     1621 aacaggtagt agaagaggag ccgactgtaa agaagaaaaa gaagaaggat aaaaagaaac
     1681 acataaagga agagccactt tccgaggagg agccatgtac cagcacagca gttcctagtc
     1741 cagagaaaaa gaagaaaaag aaaaagaaga aagatgctga agactaatgt aaaggaacca
     1801 tagccctgtc cccgaacaca tcatgcttac gattcagttg ggagcagagc acatcagatg
     1861 ctctcaaata atcaagggag gttgaatatc tagcttttca agcctttttg tgtcttgaca
     1921 tcaactgttg accttagtct ttgatacaca aataaaatat tttctttgta ttataa
//
