LOCUS       NM_029278               2687 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus NOP14 nucleolar protein (Nop14), mRNA.
ACCESSION   NM_029278
VERSION     NM_029278.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC151669.5 and AC115695.11.
            
            On Feb 2, 2022 this sequence version replaced NM_029278.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC043043.1, AK148605.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-283               AC151669.5         152549-152831
            284-418             AC151669.5         154673-154807
            419-560             AC151669.5         155800-155941
            561-694             AC151669.5         158113-158246
            695-829             AC151669.5         158665-158799
            830-952             AC151669.5         160264-160386
            953-1084            AC151669.5         160801-160932
            1085-1379           AC151669.5         162062-162356
            1380-1510           AC151669.5         163215-163345
            1511-1596           AC151669.5         164205-164290
            1597-1732           AC151669.5         165385-165520
            1733-1834           AC151669.5         167868-167969
            1835-1988           AC151669.5         168603-168756
            1989-2148           AC151669.5         171200-171359
            2149-2296           AC151669.5         171665-171812
            2297-2415           AC115695.11        705-823
            2416-2571           AC115695.11        962-1117
            2572-2687           AC115695.11        1357-1472
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 17.91 cM"
     gene            1..2687
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /note="NOP14 nucleolar protein"
                     /db_xref="GeneID:75416"
                     /db_xref="MGI:MGI:1922666"
     exon            1..283
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..2671
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /note="probable nucleolar complex protein 14; NOP14
                     nucleolar protein homolog"
                     /codon_start=1
                     /product="nucleolar protein 14"
                     /protein_id="NP_083554.2"
                     /db_xref="CCDS:CCDS19218.1"
                     /db_xref="GeneID:75416"
                     /db_xref="MGI:MGI:1922666"
                     /translation="MGKAKRTGARRQVHKAPAGASGGPAKTNPNPFEVKVNRQKFQIL
                     GRKTRHDVGLPGVSRARAIRKRTQTLLKEYKERNKSNVFADKRFGEYNSNISPEEKMM
                     KRFALEQQRYHEKKNIYNLNEDEELTHYGQSLADIEKHNDIVDSDSDTEDRGALSAEL
                     TASHFGGGVHKNSSQKEGEDGDKPKTRKELIEELIAKSKQEKRERQAQREDALELTEK
                     LDQDWKEIQILMSRKPKKSEDKEKKEKPQPDEYDMMVRELGFEMKAQPSNRMKTEEEL
                     AKEEQERLKKLEAERLRRMLGKDEHENKKKPKHTSADDLNDGFILDKDDRRLLSYKDG
                     KMNIEDVQEEQSKEADGQENDQKEGEDDSEEEDESHEDSEESEDPDSHSDLESNIESE
                     EENETPKKEQRQTPGGKLPKDDQKAQKAVAAELPYVFAAPESFEELKFLLSGRSMEEQ
                     LLVVERIQKCNHPSLAVGNKAKLEKLFGFLLQYIGDLATDSTPDLKTIDKLVVHLYSL
                     CQMFPESASDSIRFVLRDAMHEMEEMIETKGRAAFPGLDVLIYLKITGLLFPTSDFWH
                     PVVTPALLCMSQMLTKCPVMSLQDVIKGLFVCCLFLEYVSLSRRFIPELFNFLLGILY
                     IATPNTKSQGSTLVHPFRALGKNSELLVVSDKADVTTWQRGSLPLHWANRLSTLTATE
                     ANHTRLSCVASCLSLMKHCVLMYQALPSFHAIFRPHQALLSKHLADCSLPQELQELAQ
                     SILSAMEGQKQHCRPLVCEKSKPVPLKQFTPRLVKVLEFGRKQGSSKEEQERKRLIHK
                     HKREFKGAVREIRKDNQFLARMQLSEIMERDAERKRKVKQLFNSLATQEGEWKALKRK
                     KFKK"
     exon            284..418
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            419..560
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            561..694
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            695..829
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            830..952
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            953..1084
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1379
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..1510
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1511..1596
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1732
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1733..1834
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1835..1988
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            1989..2148
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            2149..2296
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            2297..2415
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            2416..2571
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     exon            2572..2687
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2667..2672
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /note="hexamer: AATAAA"
     polyA_site      2687
                     /gene="Nop14"
                     /gene_synonym="2610033H07Rik; Nol14"
                     /note="major polyA site"
ORIGIN      
        1 gtggttttac atcagcatcc tatgcacgag tttcttgaac tgcttggtct gtacgcactg
       61 tcgtccaaag tgtggcggag tgaatgtcat ggggaaagcc aagcggactg gggcgcggag
      121 gcaggtccac aaagcgcccg caggggcgtc cggaggcccg gcgaaaacta acccaaaccc
      181 atttgaagtg aaagtcaacc ggcagaagtt ccagatcctt ggcaggaaga cgcgccacga
      241 tgtgggcctg cccggggtgt cccgcgctcg tgccatcagg aagagaaccc aaactttact
      301 aaaggagtac aaagaaagga acaagtccaa tgtgttcgca gacaaacgct ttggggagta
      361 taatagcaac ataagcccag aggaaaagat gatgaagaga tttgctctgg agcaacagcg
      421 atatcatgag aaaaagaaca tctacaacct aaatgaagat gaagaattga ctcattatgg
      481 ccagtccttg gctgacattg aaaagcataa tgacattgtg gacagtgaca gtgatactga
      541 agaccggggg gcattgtcag ctgaactgac tgcttcccac tttggtggtg gggtccacaa
      601 gaacagctct cagaaggagg gcgaggatgg agacaagcca aagacacgga aggaactgat
      661 tgaggagctc attgcaaagt caaagcaaga gaagagggaa agacaggctc agcgagaaga
      721 tgcccttgag ctcacagaga agctggacca agactggaaa gaaatacaga ttctcatgtc
      781 acgaaaacct aagaagtcag aagacaaaga gaaaaaggaa aaaccccagc ccgatgaata
      841 tgacatgatg gttcgtgagc ttggctttga aatgaaggct cagccctcta acaggatgaa
      901 aacagaagag gaactagcaa aggaggagca agagaggctc aagaagctgg aggctgaaag
      961 acttcgaaga atgcttggaa aagatgaaca tgaaaataaa aagaaaccaa aacatacatc
     1021 agcagatgat ttaaatgatg gctttatact ggataaagac gataggcgct tgctttctta
     1081 caaggatggg aagatgaaca ttgaagatgt ccaggaagag caaagcaagg aagcagatgg
     1141 gcaagagaat gaccagaaag agggagaaga tgacagtgag gaagaggatg agagccatga
     1201 ggactcagaa gagagtgagg acccagacag ccactcagac ctagaatcta atatagagag
     1261 tgaggaggaa aacgagacac cgaagaagga gcaacgtcag actcctgggg ggaagttgcc
     1321 aaaggatgac cagaaagctc aaaaggctgt tgcagctgag ctgccctatg tctttgcagc
     1381 tcctgaatcc tttgaggagc tgaagttttt attgtcagga agatcaatgg aagagcaact
     1441 tttggtggtg gaaagaattc agaagtgcaa ccatccaagt cttgcagtag gaaacaaagc
     1501 aaaattggaa aaattgtttg gcttcctctt gcaatacata ggagatttgg ctacagacag
     1561 cacaccagac ctcaagacca tcgataagtt ggttgtgcac ttatatagtc tttgccagat
     1621 gtttcctgag tctgcaagtg actccataag atttgttctc cgagatgcca tgcacgagat
     1681 ggaagaaatg attgagacca aaggccgggc agcgtttcca gggttggatg tgctcattta
     1741 tttgaaaatc actgggctgt tgtttccaac ctctgatttc tggcatccag ttgtgactcc
     1801 tgccctgctg tgtatgagcc agatgcttac taagtgtcca gtcatgtccc tacaagatgt
     1861 gataaagggc ctgtttgtgt gctgcttatt cctggagtac gtgtccctgt ctcggaggtt
     1921 catccccgag ctattcaatt ttctacttgg gattctttat atagcaactc caaacacaaa
     1981 gagccaaggt tccactctgg tgcacccttt tagagcactt gggaagaact cggaattgct
     2041 cgtggtctcc gacaaagcag atgtgaccac ctggcagagg ggaagcctcc ccttgcactg
     2101 ggcaaataga ctgagcaccc tgacagcgac tgaggcaaat cacaccaggc tgtcctgcgt
     2161 agcctcgtgt ttgagcctga tgaagcactg cgtgctcatg taccaggcac tgccgtcctt
     2221 ccacgccatc ttcaggcccc atcaagccct cctgtcgaag catcttgcag attgtagcct
     2281 cccccaagaa cttcaggagc tggctcaaag catactgtca gcaatggaag gccagaagca
     2341 gcactgccgc ccgctggtgt gtgagaagag caagcccgtc ccactgaagc agttcacccc
     2401 ccggctagtc aaagtgcttg agtttggacg gaaacaaggc agcagtaaag aagaacagga
     2461 aaggaaaaga ctaatccaca aacacaagcg ggaatttaaa ggcgccgtcc gagagatccg
     2521 aaaggacaat cagttcctgg ccaggatgca gctctcagaa atcatggaaa gggatgcaga
     2581 aagaaagcgt aaagtaaaac agctttttaa tagcctggcc acgcaagaag gtgaatggaa
     2641 ggctcttaag aggaaaaagt tcaaaaaata aattgtcttg taatgta
//
