LOCUS       NM_023554               1811 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus nucleolar protein 7 (Nol7), mRNA.
ACCESSION   NM_023554
VERSION     NM_023554.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY099842.1, AK032963.1 and AB041566.1.
            
            On Nov 9, 2006 this sequence version replaced NM_023554.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032963.1, SRR1660811.156505.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                BY099842.1         1-17
            18-1679             AK032963.1         4-1665
            1680-1811           AB041566.1         1664-1795
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 21.6 cM"
     gene            1..1811
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /note="nucleolar protein 7"
                     /db_xref="GeneID:70078"
                     /db_xref="MGI:MGI:1917328"
     exon            1..283
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..794
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /note="U3 snoRNA-associated protein NOL7"
                     /codon_start=1
                     /product="U3 small nucleolar RNA-associated protein NOL7"
                     /protein_id="NP_076043.2"
                     /db_xref="CCDS:CCDS36644.1"
                     /db_xref="GeneID:70078"
                     /db_xref="MGI:MGI:1917328"
                     /translation="MVQLRPRLSRIPAPAEAMVDEDQAASEEEEAEHGLLLAQPSSGA
                     AAEPLDEEEDADDEAPEELTFASAQAEAREEELRVRASARRDKTLLKEKRKRREELFI
                     EQKKRKLLPDAVLEQLTTASEADIKKSPENVKVNLKKKSEQHAKGRNSKKVKVQKVQS
                     VGQIESYMAVRLKDEDLRDSRQEAAKHFIHSCLYGSDSKRTTVNKFLSLNNKRSPVKK
                     AAAQFLTSTWGAQKQQNAKRFKKRWMAKKMKKKTYK"
     exon            284..344
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            345..403
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            404..432
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            433..514
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            515..636
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            637..714
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     exon            715..1811
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      921..926
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /note="hexamer: CATAAA"
     polyA_site      945
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /note="major polyA site"
     regulatory      1190..1195
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
                     /note="hexamer: AATAAA"
     polyA_site      1217
                     /gene="Nol7"
                     /gene_synonym="2210008F15Rik; 5730556I21Rik; NOP27;
                     RARG-1"
ORIGIN      
        1 agggtcagac agccgccttt ccgtttgcca tggtgcagct ccggccccgc ttgtcgcgta
       61 ttcccgcgcc ggctgaggcg atggtggacg aggaccaggc ggcctcggag gaggaggagg
      121 cggagcacgg cctgctgctc gcgcagccta gcagtggcgc ggccgccgag cccctggacg
      181 aggaggagga cgcggacgac gaagccccgg aggagctgac tttcgccagc gcccaggcgg
      241 aagcccggga ggaggagctg cgcgtgcgcg cgagtgctcg cagggataaa acgctgttga
      301 aggagaagag gaaacggcgc gaggagctgt tcatcgaaca gaagaaaaga aagctgcttc
      361 cagatgctgt attagagcag ctaactacag cttcagaggc cgacataaag aaatcaccag
      421 aaaacgtaaa agttaatttg aaaaagaaaa gtgaacagca tgcaaaagga agaaactcca
      481 agaaagttaa agtacagaaa gtgcagtctg tcggtcagat tgaaagctac atggctgtaa
      541 ggcttaaaga tgaagatctg agagattcaa ggcaagaggc agccaaacac ttcatccaca
      601 gttgtttata tggttcagat tccaaaagga ctactgtaaa caagttcctg tctctgaaca
      661 acaagaggtc accagtgaaa aaggctgcag cccagtttct gactagcacc tggggagctc
      721 agaaacaaca aaatgccaag aggtttaaaa aacggtggat ggccaaaaag atgaagaaga
      781 aaacttataa gtgaatcaaa gtcaagtgaa atgaaaaacc tgcattttgc atgcatagtt
      841 taagattact gggtgcagag agggttcatt tctcaaaatt tagtcactga taaatcattg
      901 taacggatca ttataaaaat cataaacata ttttgtttgg gaaaacagct ggtcacattt
      961 cttttctaga acacaattga gtgtcctgga gggagaagca ctcacttaaa gaggaatctt
     1021 catcttttga gtggccccag gaaggggaac agagaccatt catgaagtct tttagtacag
     1081 ctgaaaagct attctggtgt tattgatgtg attcctgttg tcaaggaata agaagtcatt
     1141 gttaaaaagc acagtgtaaa aaacaaacaa aaaatccaca gaacaggtaa ataaacatgt
     1201 gttggagaag acttcaacct cagctagtac ctttacctca ccatggacga aattcattgg
     1261 aattaagtgt tttttgttct ttaaagagaa aggtaggggt gtgtgtgtca cacacatagc
     1321 tggtgtgtca ggagacaatt tatatagatt cttccctacc atgtgtgtcc agaggttgta
     1381 actaagtacc tttacctgct gagcaatctt gccagctctg gaacagcttt tcaaatttta
     1441 tttttaacta gtttggaggt tttgcttggt tgacagttac ctgttaagtt cctatttttc
     1501 tatttccttg cacagtgtaa ggttttaact aatgcagtta cctaaaggta gttttagtct
     1561 gtagaacttg aactgactct aagcagtata tgagaaccta atacataaaa ttcaactgac
     1621 actaatatct gtagaagtaa atttttaatg gctggttaat tatatcgcta catttttttt
     1681 aatatcgcta cattttttat tgcaatatag tactcattta agcacttaaa aatggaaggt
     1741 gtacaaagat taaattaaga cacggtaaat tgactaaata tttggttttt atataaataa
     1801 aggtcataac c
//
