LOCUS       XM_036156549            3812 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NLR family, pyrin domain containing 3
            (Nlrp3), transcript variant X3, mRNA.
ACCESSION   XM_036156549
VERSION     XM_036156549.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3812
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3812
                     /gene="Nlrp3"
                     /gene_synonym="AGTAVPRL; AII/AVP; Cias1; FCAS; FCU; Mmig1;
                     MWS; NALP3; Pypaf1"
                     /note="NLR family, pyrin domain containing 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 6 long SRA reads, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 7 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:216799"
                     /db_xref="MGI:MGI:2653833"
     CDS             190..3120
                     /gene="Nlrp3"
                     /gene_synonym="AGTAVPRL; AII/AVP; Cias1; FCAS; FCU; Mmig1;
                     MWS; NALP3; Pypaf1"
                     /codon_start=1
                     /product="NACHT, LRR and PYD domains-containing protein 3
                     isoform X2"
                     /protein_id="XP_036012442.1"
                     /db_xref="GeneID:216799"
                     /db_xref="MGI:MGI:2653833"
                     /translation="MTSVRCKLAQYLEDLEDVDLKKFKMHLEDYPPEKGCIPVPRGQM
                     EKADHLDLATLMIDFNGEEKAWAMAVWIFAAINRRDLWEKAKKDQPEWNDTCTSHSSM
                     VCQEDSLEEEWMGLLGYLSRISICKKKKDYCKMYRRHVRSRFYSIKDRNARLGESVDL
                     NSRYTQLQLVKEHPSKQEREHELLTIGRTKMRDSPMSSLKLELLFEPEDGHSEPVHTV
                     VFQGAAGIGKTILARKIMLDWALGKLFKDKFDYLFFIHCREVSLRTPRSLADLIVSCW
                     PDPNPPVCKILRKPSRILFLMDGFDELQGAFDEHIGEVCTDWQKAVRGDILLSSLIRK
                     KLLPKASLLITTRPVALEKLQHLLDHPRHVEILGFSEAKRKEYFFKYFSNELQAREAF
                     RLIQENEVLFTMCFIPLVCWIVCTGLKQQMETGKSLAQTSKTTTAVYVFFLSSLLQSR
                     GGIEEHLFSDYLQGLCSLAADGIWNQKILFEECDLRKHGLQKTDVSAFLRMNVFQKEV
                     DCERFYSFSHMTFQEFFAAMYYLLEEEAEGETVRKGPGGCSDLLNRDVKVLLENYGKF
                     EKGYLIFVVRFLFGLVNQERTSYLEKKLSCKISQQVRLELLKWIEVKAKAKKLQWQPS
                     QLELFYCLYEMQEEDFVQSAMDHFPKIEINLSTRMDHVVSSFCIKNCHRVKTLSLGFF
                     HNSPKEEEEERRGGRPLDQVQCVFPDTHVACSSRLVNCCLTSSFCRGLFSSLSTNRSL
                     TELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLSHQCCFDISSVLSSSQKLV
                     ELDLSDNALGDFGIRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLALVLSSNHSLTR
                     LYIGENALGDSGVQVLCEKMKDPQCNLQKLGLDNCSLTSHSCWNLSTILTHNHSLRKL
                     NLGNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNRETKRALEALQEEKPELTIVF
                     EISW"
ORIGIN      
        1 cacgagtcct ggtgactttg tatatgcgtg ttctctgtat accacatctg attgtgttaa
       61 tggctttctt atttttatct ctacagagga acttttcttc catggctcag gacatacgtc
      121 tggatcaagc taagagaact ttctgtgtgg acctaagccc cgagaccctc gaaagggctg
      181 ctgctgaaga tgacgagtgt ccgttgcaag ctggctcagt atctagagga ccttgaagat
      241 gtggacctca agaaattcaa aatgcatttg gaagattacc cgcccgagaa aggctgtatc
      301 ccagtcccca ggggccagat ggagaaggca gatcacttgg atctagccac actcatgatt
      361 gacttcaatg gcgaggagaa ggcctgggcc atggctgtgt ggatctttgc tgcgatcaac
      421 aggcgagacc tctgggaaaa agctaagaag gaccagccag agtggaatga cacgtgtaca
      481 tcacattcct ctatggtatg ccaggaggac agccttgaag aagagtggat gggtttgctg
      541 ggatatctct cccgcatctc catttgtaaa aagaagaaag attactgtaa gatgtacaga
      601 cgacatgtga gaagcaggtt ctactctatc aaggacagga acgcgcgtct aggtgagagt
      661 gtggacctca acagtcgcta cacgcagctc caactggtca aggagcatcc aagcaagcag
      721 gagcgggagc atgaactcct gaccatcggc cggactaaaa tgcgggacag ccccatgagt
      781 tcccttaagc tggagctgct gtttgagccc gaggacgggc actcggagcc tgtgcacaca
      841 gtggtgttcc agggagcagc aggcatcggg aaaaccatcc tagccaggaa gattatgttg
      901 gactgggcac tgggaaagct cttcaaagac aaatttgact atttgttctt tatccactgc
      961 cgagaggtga gcctcaggac gccaaggagt ctagcagacc tgattgtcag ctgctggcct
     1021 gacccaaacc caccagtgtg caagatcctg cgcaagcctt ccaggatcct cttcctcatg
     1081 gatggctttg atgagctaca aggggccttt gacgagcaca ttggggaggt ctgcacagac
     1141 tggcaaaagg ctgtgcgggg agacattctg ctaagcagcc tcatccgaaa gaaactgctg
     1201 cccaaggcct ctctgctcat aacgacgagg ccggtagcct tggagaaact gcagcatctc
     1261 ctggaccacc cccgccatgt ggagatccta ggtttctctg aggccaaaag gaaggagtat
     1321 ttctttaagt atttctccaa cgagctgcag gcccgggagg ccttcaggct gatccaagag
     1381 aatgaggtcc tctttaccat gtgcttcatc cccctggtct gctggattgt gtgcacgggg
     1441 ctaaagcaac agatggagac cgggaagagc ctggcccaga cctccaagac cactacggcc
     1501 gtctacgtct tcttcctttc cagcctgctg caatcccggg ggggcattga ggagcatctc
     1561 ttctctgact acctacaggg gctctgttca ctggctgcgg atggaatttg gaaccagaaa
     1621 atcctatttg aggagtgtga tctgcggaag cacggcctgc agaagactga cgtctccgct
     1681 ttcctgagga tgaacgtgtt ccagaaggaa gtggactgcg agagattcta cagcttcagc
     1741 cacatgactt tccaggagtt cttcgctgct atgtactatt tgctggaaga ggaggcagag
     1801 ggggagaccg tgaggaaagg accaggaggt tgttcagatc ttctgaaccg agacgtgaag
     1861 gtcctactag aaaattacgg caagtttgaa aaaggctatc tgatttttgt tgtccgattc
     1921 ctctttggcc ttgtaaacca ggagagaacc tcttatttgg agaagaaact aagttgcaag
     1981 atctctcagc aagtcagact ggaactactg aagtggattg aagtgaaagc caaggccaag
     2041 aagctgcagt ggcagcccag ccaactggaa ctgttctact gcctgtacga gatgcaggag
     2101 gaagactttg tgcagagtgc catggaccac tttcccaaaa ttgagatcaa cctctctacc
     2161 agaatggacc acgtggtttc ctccttttgt attaagaact gtcatagggt caaaacgctt
     2221 tccctgggtt tttttcacaa ctcgcccaag gaggaagaag aagagaggag aggaggtcga
     2281 cccttggacc aggttcagtg tgttttccca gacactcatg ttgcctgttc ttccagactg
     2341 gtgaactgct gcctcacttc tagcttctgc cgtggtctct tctcaagtct aagcaccaac
     2401 cggagcctca ctgaactgga cctcagtgac aatactctgg gagacccggg catgagggtg
     2461 ctgtgtgagg cactccagca cccaggctgt aacattcaga gactgtggtt ggggcgctgc
     2521 ggactgtccc atcaatgctg cttcgacatc tcctctgtcc tgagcagcag ccagaagctg
     2581 gtggagctgg acctcagtga caatgccctg ggggactttg gaatcagatt gctgtgtgtg
     2641 ggactgaagc acctgctctg caacctccag aaactgtggt tggtgagctg ctgtctcaca
     2701 tccgcgtgtt gtcaggatct cgcattggtt ctgagctcca accattctct gaccagactg
     2761 tacattggag aaaatgcctt gggagactca ggagtccaag ttttgtgtga aaagatgaag
     2821 gacccacagt gtaacttgca gaagctggga ttagacaact gcagcctcac ctcacacagc
     2881 tgctggaatc tctccacaat tctgacccac aaccacagcc ttcggaagct gaacctgggc
     2941 aacaatgatc ttggcgatct gtgcgtggtg accctctgtg aggtgctgaa acagcagggc
     3001 tgcctcctgc agagcctaca gttgggtgaa atgtacttaa atcgtgaaac aaaacgtgcc
     3061 ttagaagcgc tccaggaaga aaagcctgag ctgactatag tcttcgagat ttcctggtag
     3121 gcgtggaagc aggaccacca ggtgcctcgg tcctgcccca agtcctgccc caagccccag
     3181 tgcgcactgc tcttcactgc tatcaagccc tccttcacca tcaggatcac agccgaggct
     3241 cttctggtat agggtctgga gcaaaggctt gtgtgggacc aaatattttt cctcacatcg
     3301 ataacgtgaa actgccagag gctgcccttc ccatcatatc ctcagtgggc aaggtgttcc
     3361 ctcttggtga cttcatggaa acagcttcaa gaaaacgcct tttctgtcct cccccgccct
     3421 cctcttactc ctgcccctcc tcctcctcct cctcccctcc ccccccctcc tcctccgctt
     3481 ctccccccac ctgtctttct ctctctgggc ctctggtttt ttgacctttg cccatacctt
     3541 cagtcttgtc ttcctgttaa ctgaccatcc cgcataagga gctgcccgtg ggctagatgg
     3601 aaggtttgtg gcagcctctc agctacattg tttgttttta ttttttaata gttatgattt
     3661 ctctttagct acctgaaaac tcagagattt ataaaaccca tttttgtatt tattgtatgt
     3721 ttgtactgct ttcttaattt aaaaatgtat ctagaattct tttaagttat ttatccaaac
     3781 tactaaaaat aaatcagttt acacatttaa aa
//
