LOCUS       XM_036156548            3916 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NLR family, pyrin domain containing 3
            (Nlrp3), transcript variant X2, mRNA.
ACCESSION   XM_036156548
VERSION     XM_036156548.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3916
                     /gene="Nlrp3"
                     /gene_synonym="AGTAVPRL; AII/AVP; Cias1; FCAS; FCU; Mmig1;
                     MWS; NALP3; Pypaf1"
                     /note="NLR family, pyrin domain containing 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 7 ESTs, 7 long SRA reads, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:216799"
                     /db_xref="MGI:MGI:2653833"
     CDS             123..3224
                     /gene="Nlrp3"
                     /gene_synonym="AGTAVPRL; AII/AVP; Cias1; FCAS; FCU; Mmig1;
                     MWS; NALP3; Pypaf1"
                     /codon_start=1
                     /product="NACHT, LRR and PYD domains-containing protein 3
                     isoform X1"
                     /protein_id="XP_036012441.1"
                     /db_xref="GeneID:216799"
                     /db_xref="MGI:MGI:2653833"
                     /translation="MTSVRCKLAQYLEDLEDVDLKKFKMHLEDYPPEKGCIPVPRGQM
                     EKADHLDLATLMIDFNGEEKAWAMAVWIFAAINRRDLWEKAKKDQPEWNDTCTSHSSM
                     VCQEDSLEEEWMGLLGYLSRISICKKKKDYCKMYRRHVRSRFYSIKDRNARLGESVDL
                     NSRYTQLQLVKEHPSKQEREHELLTIGRTKMRDSPMSSLKLELLFEPEDGHSEPVHTV
                     VFQGAAGIGKTILARKIMLDWALGKLFKDKFDYLFFIHCREVSLRTPRSLADLIVSCW
                     PDPNPPVCKILRKPSRILFLMDGFDELQGAFDEHIGEVCTDWQKAVRGDILLSSLIRK
                     KLLPKASLLITTRPVALEKLQHLLDHPRHVEILGFSEAKRKEYFFKYFSNELQAREAF
                     RLIQENEVLFTMCFIPLVCWIVCTGLKQQMETGKSLAQTSKTTTAVYVFFLSSLLQSR
                     GGIEEHLFSDYLQGLCSLAADGIWNQKILFEECDLRKHGLQKTDVSAFLRMNVFQKEV
                     DCERFYSFSHMTFQEFFAAMYYLLEEEAEGETVRKGPGGCSDLLNRDVKVLLENYGKF
                     EKGYLIFVVRFLFGLVNQERTSYLEKKLSCKISQQVRLELLKWIEVKAKAKKLQWQPS
                     QLELFYCLYEMQEEDFVQSAMDHFPKIEINLSTRMDHVVSSFCIKNCHRVKTLSLGFF
                     HNSPKEEEEERRGGRPLDQVQCVFPDTHVACSSRLVNCCLTSSFCRGLFSSLSTNRSL
                     TELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLSHQCCFDISSVLSSSQKLV
                     ELDLSDNALGDFGIRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLALVLSSNHSLTR
                     LYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSICCSALTSVLKTNQNFTHL
                     YLRSNALGDTGLRLLCEGLLHPDCKLQMLELDNCSLTSHSCWNLSTILTHNHSLRKLN
                     LGNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNRETKRALEALQEEKPELTIVFE
                     ISW"
ORIGIN      
        1 aagagtggac acgagacaga ggaacttttc ttccatggct caggacatac gtctggatca
       61 agctaagaga actttctgtg tggacctaag ccccgagacc ctcgaaaggg ctgctgctga
      121 agatgacgag tgtccgttgc aagctggctc agtatctaga ggaccttgaa gatgtggacc
      181 tcaagaaatt caaaatgcat ttggaagatt acccgcccga gaaaggctgt atcccagtcc
      241 ccaggggcca gatggagaag gcagatcact tggatctagc cacactcatg attgacttca
      301 atggcgagga gaaggcctgg gccatggctg tgtggatctt tgctgcgatc aacaggcgag
      361 acctctggga aaaagctaag aaggaccagc cagagtggaa tgacacgtgt acatcacatt
      421 cctctatggt atgccaggag gacagccttg aagaagagtg gatgggtttg ctgggatatc
      481 tctcccgcat ctccatttgt aaaaagaaga aagattactg taagatgtac agacgacatg
      541 tgagaagcag gttctactct atcaaggaca ggaacgcgcg tctaggtgag agtgtggacc
      601 tcaacagtcg ctacacgcag ctccaactgg tcaaggagca tccaagcaag caggagcggg
      661 agcatgaact cctgaccatc ggccggacta aaatgcggga cagccccatg agttccctta
      721 agctggagct gctgtttgag cccgaggacg ggcactcgga gcctgtgcac acagtggtgt
      781 tccagggagc agcaggcatc gggaaaacca tcctagccag gaagattatg ttggactggg
      841 cactgggaaa gctcttcaaa gacaaatttg actatttgtt ctttatccac tgccgagagg
      901 tgagcctcag gacgccaagg agtctagcag acctgattgt cagctgctgg cctgacccaa
      961 acccaccagt gtgcaagatc ctgcgcaagc cttccaggat cctcttcctc atggatggct
     1021 ttgatgagct acaaggggcc tttgacgagc acattgggga ggtctgcaca gactggcaaa
     1081 aggctgtgcg gggagacatt ctgctaagca gcctcatccg aaagaaactg ctgcccaagg
     1141 cctctctgct cataacgacg aggccggtag ccttggagaa actgcagcat ctcctggacc
     1201 acccccgcca tgtggagatc ctaggtttct ctgaggccaa aaggaaggag tatttcttta
     1261 agtatttctc caacgagctg caggcccggg aggccttcag gctgatccaa gagaatgagg
     1321 tcctctttac catgtgcttc atccccctgg tctgctggat tgtgtgcacg gggctaaagc
     1381 aacagatgga gaccgggaag agcctggccc agacctccaa gaccactacg gccgtctacg
     1441 tcttcttcct ttccagcctg ctgcaatccc gggggggcat tgaggagcat ctcttctctg
     1501 actacctaca ggggctctgt tcactggctg cggatggaat ttggaaccag aaaatcctat
     1561 ttgaggagtg tgatctgcgg aagcacggcc tgcagaagac tgacgtctcc gctttcctga
     1621 ggatgaacgt gttccagaag gaagtggact gcgagagatt ctacagcttc agccacatga
     1681 ctttccagga gttcttcgct gctatgtact atttgctgga agaggaggca gagggggaga
     1741 ccgtgaggaa aggaccagga ggttgttcag atcttctgaa ccgagacgtg aaggtcctac
     1801 tagaaaatta cggcaagttt gaaaaaggct atctgatttt tgttgtccga ttcctctttg
     1861 gccttgtaaa ccaggagaga acctcttatt tggagaagaa actaagttgc aagatctctc
     1921 agcaagtcag actggaacta ctgaagtgga ttgaagtgaa agccaaggcc aagaagctgc
     1981 agtggcagcc cagccaactg gaactgttct actgcctgta cgagatgcag gaggaagact
     2041 ttgtgcagag tgccatggac cactttccca aaattgagat caacctctct accagaatgg
     2101 accacgtggt ttcctccttt tgtattaaga actgtcatag ggtcaaaacg ctttccctgg
     2161 gtttttttca caactcgccc aaggaggaag aagaagagag gagaggaggt cgacccttgg
     2221 accaggttca gtgtgttttc ccagacactc atgttgcctg ttcttccaga ctggtgaact
     2281 gctgcctcac ttctagcttc tgccgtggtc tcttctcaag tctaagcacc aaccggagcc
     2341 tcactgaact ggacctcagt gacaatactc tgggagaccc gggcatgagg gtgctgtgtg
     2401 aggcactcca gcacccaggc tgtaacattc agagactgtg gttggggcgc tgcggactgt
     2461 cccatcaatg ctgcttcgac atctcctctg tcctgagcag cagccagaag ctggtggagc
     2521 tggacctcag tgacaatgcc ctgggggact ttggaatcag attgctgtgt gtgggactga
     2581 agcacctgct ctgcaacctc cagaaactgt ggttggtgag ctgctgtctc acatccgcgt
     2641 gttgtcagga tctcgcattg gttctgagct ccaaccattc tctgaccaga ctgtacattg
     2701 gagaaaatgc cttgggagac tcaggagtcc aagttttgtg tgaaaagatg aaggacccac
     2761 agtgtaactt gcagaagctg gggttggtga attccggcct tacttcaatc tgttgttcag
     2821 ctctgacctc tgtgctcaaa accaaccaga acttcacaca cctctatcta cgaagcaatg
     2881 cccttggaga cacaggactc aggctcctct gtgaggggct tctgcacccg gactgtaaac
     2941 tacagatgct ggaattagac aactgcagcc tcacctcaca cagctgctgg aatctctcca
     3001 caattctgac ccacaaccac agccttcgga agctgaacct gggcaacaat gatcttggcg
     3061 atctgtgcgt ggtgaccctc tgtgaggtgc tgaaacagca gggctgcctc ctgcagagcc
     3121 tacagttggg tgaaatgtac ttaaatcgtg aaacaaaacg tgccttagaa gcgctccagg
     3181 aagaaaagcc tgagctgact atagtcttcg agatttcctg gtaggcgtgg aagcaggacc
     3241 accaggtgcc tcggtcctgc cccaagtcct gccccaagcc ccagtgcgca ctgctcttca
     3301 ctgctatcaa gccctccttc accatcagga tcacagccga ggctcttctg gtatagggtc
     3361 tggagcaaag gcttgtgtgg gaccaaatat ttttcctcac atcgataacg tgaaactgcc
     3421 agaggctgcc cttcccatca tatcctcagt gggcaaggtg ttccctcttg gtgacttcat
     3481 ggaaacagct tcaagaaaac gccttttctg tcctcccccg ccctcctctt actcctgccc
     3541 ctcctcctcc tcctcctccc ctcccccccc ctcctcctcc gcttctcccc ccacctgtct
     3601 ttctctctct gggcctctgg ttttttgacc tttgcccata ccttcagtct tgtcttcctg
     3661 ttaactgacc atcccgcata aggagctgcc cgtgggctag atggaaggtt tgtggcagcc
     3721 tctcagctac attgtttgtt tttatttttt aatagttatg atttctcttt agctacctga
     3781 aaactcagag atttataaaa cccatttttg tatttattgt atgtttgtac tgctttctta
     3841 atttaaaaat gtatctagaa ttcttttaag ttatttatcc aaactactaa aaataaatca
     3901 gtttacacat ttaaaa
//
