LOCUS       XM_017322321            5126 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NLR family, pyrin domain containing 12
            (Nlrp12), transcript variant X3, mRNA.
ACCESSION   XM_017322321
VERSION     XM_017322321.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017322321.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5126
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..5126
                     /gene="Nlrp12"
                     /gene_synonym="monarch-1; Nalp12; PYPAF7"
                     /note="NLR family, pyrin domain containing 12; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 10 ESTs, 15 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:378425"
                     /db_xref="MGI:MGI:2676630"
     CDS             954..3701
                     /gene="Nlrp12"
                     /gene_synonym="monarch-1; Nalp12; PYPAF7"
                     /codon_start=1
                     /product="NACHT, LRR and PYD domains-containing protein 12
                     isoform X2"
                     /protein_id="XP_017177810.1"
                     /db_xref="GeneID:378425"
                     /db_xref="MGI:MGI:2676630"
                     /translation="MEDRNARLGECVNLSNRYTRLLLVKEHSNPIWTQQKFVDVEWER
                     SRTRRHQTSPIQMETLFEPDEERPEPPHTVVLQGAAGMGKSMLAHKVMLDWADGRLFQ
                     GRFDYVFYISCRELNRSHTQCSVQDLISSCWPERGISLEDLMQAPDRLLFIIDGFDKL
                     HPSFHDAQGPWCLCWEEKQPTEVLLGSLIRRLLLPQVSLLITTRPCALEKLHGLLEHP
                     RHVEILGFSEEARKEYFYRYFHNTGQASRVLSFLMDYEPLFTMCFVPMVSWVVCTCLK
                     QQLESGELLRQTPRTTTAVYMFYLLSLMQPKPGTPTFKVPANQRGLVSLAAEGLWNQK
                     ILFDEQDLGKHGLDGADVSTFLNVNIFQKGIKCEKFYSFIHLSFQEFFAAMYCALNGR
                     EAVRRALAEYGFSERNFLALTVHFLFGLLNEEMRCYLERNLGWSISPQVKEEVLAWIQ
                     NKAGSEGSTLQHGSLELLSCLYEVQEEDFIQQALSHFQVVVVRSISTKMEHMVCSFCA
                     RYCRSTEVLHLHGSAYSTGMEDDPPEPSGVQTQSTYLQERNMLPDVYSAYLSAAVCTN
                     SNLIELALYRNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANR
                     NLIRLDLSDNSIGVPGLELLCEGLQHPRCRLQMIQLRKCLLEAAAGRSLASVLSNNSY
                     LVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLKMNQSL
                     LELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQVNTCLQ
                     ELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSILGISQTLHE
                     LYLTNNALGDTGVCLLCKRLRHPGCKLRVLWLFGMDLNKKTHRRMAALRVTKPYLDIG
                     C"
ORIGIN      
        1 cacaaaactc catcttaaaa accaaacaca tgagctggtg agatggctca gtggatcagg
       61 tggcttctgc taccaaacct gatggcccta ctttcatccc cagaacccac atggcaaaaa
      121 caaagaactg attcccaagc ttgtcctcca acttccacac actccttacg gtatgcatac
      181 ctcatccccc acaaaacaat aatggtcagg ggacacgcat acacacacac acatctccaa
      241 gctgctggct gtgatggcac ccacctttaa tcctagccct caatgaaaaa gaagcaagta
      301 gatctctgta agttcaaggt tagcctgatc ttcatagcta gctctagccc agtcaaggtt
      361 atataatgag acgctgtctt aaaaaaacaa aaaattacat gtctaaatat atgaagaaaa
      421 gtatatttta tgtgtgtaaa agattttcta tttacatttt tgttatattt acttctgtgt
      481 gtgtatgggg tgaggtgggg tagattaggt ggccttcaag actgtcttct gtcctccagg
      541 ctggccttga aggccctttg taaccaagga taacttaaaa tcctggtttt tatgcctctg
      601 cctcctactt aggcttaaat tctctgtctc tctctctctg tctctctctc tgtctctctg
      661 tctctctctc tctccctgtg tgtgtgtatc tgtgtattta ttagtatgga tgtatattta
      721 tgcatattaa agaaaattct ttcctagcca cctccaaaaa catcttaacc cagacacaat
      781 tccatttcct cattgcttga cttcggacct atctctcatc accaatcact ccaaataatg
      841 gtctatgcct ttttgagagc caatcagcgt gccctttgga tgtctctccc aatgctccaa
      901 gaaaagatct acagacaacc tacaaagact atgtccgaag gaaattccag ctaatggaag
      961 accgcaatgc acgattaggc gaatgtgtga acctgagcaa tcgttacact cggcttctcc
     1021 tagtaaaaga acactcaaat cctatctgga cacagcagaa atttgtagat gtagagtggg
     1081 aacgctccag aaccaggcgt caccagacta gtcctatcca aatggagacc ctctttgagc
     1141 cagacgaaga acgccccgag ccaccacaca cagtggtatt acaaggggca gcggggatgg
     1201 ggaagtccat gctggcccac aaagtgatgt tggactgggc cgatgggagg ctcttccaag
     1261 gccggtttga ttatgtcttc tatatcagct gcagggagtt gaatagaagc cacacccagt
     1321 gcagtgtaca agacctcatc tccagctgct ggccggagcg tggtatatcc ctcgaagacc
     1381 tcatgcaggc tcctgaccgt ctcctattca tcattgatgg cttcgataaa ctccatcctt
     1441 ctttccatga tgctcagggt ccctggtgcc tctgctggga ggagaaacaa cctactgaag
     1501 tcctcctcgg aagtctgatt cggaggttgc ttctgcccca ggtctctctg ctcatcacca
     1561 cacgaccctg tgcactggag aagctgcacg gcttgctaga acaccccagg cacgtggaga
     1621 tcctgggctt ctccgaggaa gctaggaagg aatatttcta cagatatttc cacaacactg
     1681 gacaagcaag ccgggtgtta agcttcttga tggactatga gcccctcttt accatgtgtt
     1741 ttgttcccat ggtgtcctgg gtggtctgca cctgcctaaa gcagcagctg gaaagtgggg
     1801 agcttttaag acaaacacct aggaccacca cagctgttta tatgttctac cttctgagcc
     1861 tgatgcagcc caagccaggg actccaacct tcaaagtccc agccaaccag agaggcctgg
     1921 tctctctggc tgcagagggc ctctggaatc agaagattct atttgatgaa caggatcttg
     1981 ggaaacacgg cctagatgga gcagatgtgt ccactttcct caacgtgaac atattccaga
     2041 agggtatcaa atgtgagaaa ttctacagct tcatccacct gagtttccag gaattcttcg
     2101 cagccatgta ctgtgcactg aatggcagag aggcggtgag gagagcgctg gctgagtatg
     2161 gtttttcgga aaggaacttc ttggccctca cggtccactt tctgtttggc ctcctcaacg
     2221 aagagatgag atgctacctt gagaggaatc tcggctggag catctcccct caggtgaagg
     2281 aggaagtgtt ggcatggatc caaaacaagg ctgggagtga aggctccacc ctgcagcatg
     2341 gctccctgga gctactcagc tgcttgtatg aggtccagga ggaggacttc atccagcagg
     2401 ccctgagcca ctttcaagtg gttgtagtca gaagcatctc aacaaagatg gagcacatgg
     2461 tctgctcgtt ttgtgcgagg tattgcagaa gtacagaagt gcttcacttg catgggagtg
     2521 cttatagtac aggcatggag gacgacccac cagaaccttc aggagtccag actcagtcca
     2581 catacttaca ggaaaggaac atgctgcctg atgtctacag tgcatacctt tcagcagctg
     2641 tctgtaccaa ctccaacctg atcgagctgg ccttataccg aaatgccttg ggcagccagg
     2701 gtgtaaggct gctctgtcaa ggcctccgac atgccagctg caagctgcag aacctgaggc
     2761 tgaagaggtg tcagatctcc ggatcagcct gccaggacct cgcagccgct gtcatcgcca
     2821 acaggaattt aatcaggctg gacctcagtg acaacagcat tggggtgcca ggcctggagc
     2881 tgctctgtga ggggctgcag caccccaggt gtaggctgca gatgatccag ctgaggaagt
     2941 gtctgttgga ggctgcagct ggccgatccc tggcttctgt tctcagcaac aactcatatc
     3001 tggtagaact ggatctgaca ggaaacccct tggaagattc ggggctgaag ttactgtgtc
     3061 aagggctaag gcaccctgtc tgcaggctgc gtaccctgtg gctgaagatc tgccaccttg
     3121 gacaagcttc ctgcgaagat ctggcctcta ctctcaaaat gaaccagagc ctgctggagc
     3181 tggacctggg tctgaatgat cttggagatt ctggggtgct tctgctgtgt gaaggcctca
     3241 gtcatccaga ttgcaaactc cagacccttc ggttgggcat ttgccgactg ggctcagtcg
     3301 cgtgtgtggg gatcgccagt gtgctccagg tcaacacatg cctccaagag ctggacctga
     3361 gcttcaatga cttgggagac aggggcctgc agctgctggg ggaaggcctg aggcaccaga
     3421 cctgcagact ccagaagctg tggctggaca actgcggact cacctccaaa gcatgtgagg
     3481 acctttcttc tatcctggga atcagccaga ccctgcatga gctttatttg accaataatg
     3541 ctctggggga cacaggtgtc tgtctgctgt gcaagaggct gaggcatcca ggctgcaagc
     3601 ttcgagtcct gtggctgttt gggatggacc tgaataaaaa gactcacagg aggatggcag
     3661 cacttcgagt cacaaaaccg tacctggata ttgggtgttg agcagtaagg agaaccagaa
     3721 tgaagccgac caggatattt attccctctg ctttgaagca cttgaggtgg aacttttaaa
     3781 ggccagcctc tggtatatgg tgaggtggag acaagatcac tcaaggtcat cctgttacat
     3841 gggaccgtct taggtcagga ggcccagtaa gtgcaggttg acaaaattgt tctgcttgag
     3901 acctaaacac tcaacctttg atggagctca ctgggtttga tgtagattcc acgcagataa
     3961 tttaggacgg ggattggctg gttagcaggt ttgaagatca gtaaagacca cagaaaagga
     4021 aaaatatcca gagtcctaga catttccatg gaccaagact gccatctact ggccaagtca
     4081 cagcataaag acccacaagg taatttttca aaaattgtac tcaagggctg gagtggttaa
     4141 gtcagaggtc ctgagttcaa ttcccagcaa ctacatggtg gcttgcaatc atctgtaatg
     4201 ggatccaatg ccttctttgg gtgaatctga agatagctac agaacactta taaatcttta
     4261 aaaagaaaaa ttgtactcac acctgaattt tatacagcag ggggaaaaaa aagtgggctg
     4321 gggctaaagg tataaggcac cttacaaatg aggcctcaaa acccaagatt tgcacacctg
     4381 gtatagttga cagccaatgc tcccatccta tcctgggtta ttagattttg cccagctgtg
     4441 gtggtgttcg cattgaatct caacactcca gaaaactgag caaggtggcc aaggatgcag
     4501 aaatcatggc tgtgcatgac tcacgacctg acactagtga ggcctggcag acatcattcc
     4561 cagcaaccac gtggtagctc caccacttat aatgggataa ctccgcccac ttccagtaca
     4621 gtacccagag atctaccttt attatattaa attcaaacgc tatccagaag tcccctatat
     4681 cctcccccac accctgctcc ccaacccact actttttaaa acctggcacc accccatttc
     4741 aggttagctt gtaaccatcc agacactcca ctaaaaggaa ctggccatga tgtatagaaa
     4801 tggaaaagac tcacagtata taaacaaatg tgggcttaaa tgtggctatg cttaaaggca
     4861 cctttaagct agtacagggt aattcttcct taaaaccatt ggaggggtgg catgcctaaa
     4921 tcccaagagg caaacagggg tgtctcccaa aaggtgccct attactgttg aaaacacttc
     4981 cagctatgtg ttggtttaac ttttggggat tttttcagac agggtttttc tgtatagccc
     5041 aggattacct ttagtctcaa ccccagtgat taaaagggtg cttgcatgct tgcaagcttt
     5101 ttttatccct aggaaccatg gcgggt
//
