LOCUS       NM_001290410            4668 bp    mRNA    linear   ROD 04-OCT-2024
DEFINITION  Mus musculus Na+/K+ transporting ATPase interacting 3 (Nkain3),
            transcript variant 1, mRNA.
ACCESSION   NM_001290410 XM_006537952
VERSION     NM_001290410.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4668)
  AUTHORS   Gorokhova,S., Bibert,S., Geering,K. and Heintz,N.
  TITLE     A novel family of transmembrane proteins interacting with beta
            subunits of the Na,K-ATPase
  JOURNAL   Hum Mol Genet 16 (20), 2394-2410 (2007)
   PUBMED   17606467
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC075683.1, AK141456.1 and CR931798.8.
            
            On Mar 12, 2014 this sequence version replaced XM_006537952.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK141456.1, SRR9219381.155568.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-101               BC075683.1         1-101
            102-2243            AK141456.1         2-2143
            2244-2244           CR931798.8         68867-68867         c
            2245-4668           AK141456.1         2145-4568
FEATURES             Location/Qualifiers
     source          1..4668
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 7.82 cM"
     gene            1..4668
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /note="Na+/K+ transporting ATPase interacting 3"
                     /db_xref="GeneID:269513"
                     /db_xref="MGI:MGI:2444830"
     exon            1..407
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             354..899
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     sodium/potassium-transporting ATPase subunit
                     beta-1-interacting protein 3; Na(+)/K(+)-transporting
                     ATPase subunit beta-1-interacting protein 3"
                     /codon_start=1
                     /product="sodium/potassium-transporting ATPase subunit
                     beta-1-interacting protein 3 isoform 1"
                     /protein_id="NP_001277339.1"
                     /db_xref="CCDS:CCDS71349.1"
                     /db_xref="GeneID:269513"
                     /db_xref="MGI:MGI:2444830"
                     /translation="MGCCTGRCSLVCLCALQLLSALERQIFDFLGFQWAPILGNFLHI
                     IVVILGLFGTIQYRPRYIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTDLMTFNISV
                     HRSWWREHGPGCVRRVLPPSAHGMMDDYTYVSVTGCVVDFQYLEVIHSAVQILLSLVG
                     FVYACYVISISMEEEDTCRNK"
     exon            408..545
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            546..626
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            627..824
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            825..885
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            886..4668
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3772..3777
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3794
                     /gene="Nkain3"
                     /gene_synonym="C530048M05; E130310K16Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctgcatactc ccctccccta aaagacattc acccactcac cagctgtagc ctcttccatc
       61 ccccgccctc cgcccggctc cccctcctca agaagccgac cctcgcgcta ggaggtaggg
      121 acccctggca gacgcactgc acgggcgcgc cgcgctgacc tccgcccgcc ctgcacgcag
      181 attaacaaag gcgacagcga gccccagtcc gaaagcagaa agccggccgc ggggtccgga
      241 gcctgcgccc ggtcagtcgg ggagagagcc gcgcgggctg ctctgaagtc gcaggataca
      301 gccggagctg ccagatctct ctcaagcggc gctgctggga cgctggccgc accatgggct
      361 gctgcaccgg gcgctgctcg ctggtctgtc tctgcgcact gcagctgctt tcagcattgg
      421 agaggcagat ctttgacttc cttggcttcc agtgggcacc cattcttgga aatttcctgc
      481 atataatagt tgtcatattg ggtctgtttg gaaccattca gtatagacca cgttacatca
      541 tggtgtatac agtgtggact gctctctggg tcacttggaa tgtgttcatc atctgctttt
      601 atttggaagt aggaggcctc tctaaggaca cagatctgat gaccttcaac atctctgtac
      661 accggtcatg gtggagggag catggacctg gctgtgtccg gagagtgcta ccaccatcag
      721 cccatggcat gatggatgac tacacatacg tctcagtcac aggctgtgtt gtcgatttcc
      781 agtacctaga ggtcatccac agcgctgtac aaatactgct atcgctggtt ggttttgtgt
      841 atgcctgtta tgtgatcagc atttccatgg aagaagaaga cacctgtcga aataagtaat
      901 gacattgact ctgaaatgcg gctcctggac ttgagttagg gaacaaagca ccattggcct
      961 ctagctctgg ggatcctaca gcgtcacctt cctcctagac agcaggactg cgccccctgc
     1021 cgaccagacc agcgaacacg gagctgcgag gtctttggtc tcagcctgtg taacattagc
     1081 gttgtttgct agatgcgttc tgggtgcttg ggtgggtttg ttttttttgt tttgttttgt
     1141 tttgttttgt ttttaaagtc atcttcttat ataagcactt gtaaattgta aaaaaaatgg
     1201 ttttaaattg tttttaattt aacttgaggc atgcaaaatg aaaaaaaaaa atctatgaaa
     1261 atcttctcca agtcatttct aagaggattg tctgtgttat tgagctgtga catccaggtt
     1321 actggaccct gaaccctgct aagctaatgg ttttgtatac acagacattg cctttgggca
     1381 tcagacacaa gggtagacct gtggcagact gcacaaagac tggatctaac tttccaacct
     1441 agcaaagatc actgtttaaa cagcaccaga cacagacaaa acatgaagcc ctttgttctg
     1501 aatctctaaa gagtgcacaa tctctaaata gtccgatata aatgtgcaga tccgtgtatc
     1561 tcttgtcctt gcaatgttcc aagacacaca tgtatgtgcg tgtttatatt atgactgagt
     1621 acaaacccag aatgatgtgt ggaacccttc ctaggcaggg agttggctgg ctgtgagctt
     1681 cgtattttct gctcttagtt tcactctcac cactgatgtc agacctatac atacagctca
     1741 agggctgtgg gacagaaatc acagccataa atctgtagtc aggaacgttt tgaatattca
     1801 aagggggcat tcaaatgcta tagaattctc tatagagatc tgtaacaaaa atatttatgc
     1861 ctgagttaca tcagtttttc tttctttttc cccattcatc ccaataatca agaaaattaa
     1921 gtggaaaatc taattttcta agggggagaa taggtccatc ttggaaaaag tattgcaatt
     1981 ctggggcctt ttagattcaa atgaaatata gatatggtga aatgcatagg tttttaaggg
     2041 tacaatgaga agtgcacaaa cttaatgagc agtgcttcaa ccaaaataca gaacatgtct
     2101 gaccctttag gaaccttcct tggtcccctt ttccattggt ctccatgatg ccattgatcc
     2161 ccaacaaata ccacattaga aattgcagtg tgcttgactt agtctgctga tgtaaactgg
     2221 ttttgaccaa atacctggcc attgtaaagt ggccaagtag atggataaaa tccatgttga
     2281 ttctcactgc taaggtttaa ctgcatcgct gatgaactgt ctgctcaccg tataaggcag
     2341 gtatttgtct caccacattg ttttcctgtc tctgccttag ttctcatgtg aaaagccatt
     2401 ctggtccttt tgtacacaca caaaaattga gtcttccctt catcacagtt ctgtctgtcc
     2461 actgtttgct ccagagtcag tccagtgcag ctcacatatc tctaaggcat ccataaacca
     2521 ctgaaattgg tacaaagttt tgtatgcttg tggaagtctc tctgttccct cttctccctc
     2581 ttatatgcat agatttcatg agtctgctat cagaatttaa tgcaatcccc tctgccctaa
     2641 tgcctcgaag ttcatgtact aggctgtatc ctgtccttta gctggtactc ccactgagtt
     2701 ctctcctaca gaataaacct agattctaaa tgacagggag ctcttggaac ctgaaaggtg
     2761 gtgccatcaa actcccattt gaggagacca gggttgtggc agggtgtaga agaataacac
     2821 aaaggccatg tcttggcacc aagtctttgc actcatgacc aacctggctc caggcacagc
     2881 cttcttttga atgaatgact tactcttcct tggagcaacc agctaaatta tgtggaaatg
     2941 caagagctag gatggcatca gcttatttat gggaacttcc aatcatgtgc cagcaaaagt
     3001 taggcagaaa gataaaagga ttagagaact ctcggacatg aagtggcttg agcatggagc
     3061 agtccatatc agagaaaaac tatatgagta tgttctccaa tgatcttagc ctccttttta
     3121 ccaccataga aagggtgagg gtgtgaccct gaaacaagaa catgtcttca tacaactcta
     3181 aaccttgaat gtggttggtt cacctttttt tagaagataa catggcatct tgttctagca
     3241 atatattgat gcattttctt atccctttgg taaaacaaac ctcgctgttc ccataagccc
     3301 aaataacaga ggcagctatc ttttagtagc tcaacctgac aggatatagc aaaatgactg
     3361 gctacctgtt tcatccaatg aacagccctt ttctgataag cgaaatttgt ctacgttaaa
     3421 atcaactgaa atgtgtgttg tgaaggcgag aaaaaacatc atgaccgcta aatggaggag
     3481 caagtaaaaa ccaaaattgc actttttgtc tctgaaaatt agaatcttgc caagataaaa
     3541 cagactttca tttttttttt ttacttaatc ttaaatttta tgttcccaaa atagtctcac
     3601 tatggaaaac agagattctg agtgtgtggt ttttaaagta aatacttatc acttatgagt
     3661 cactttaata aggaattcag aaaaaaaaac tttataggtt gattagaatt caggtgttct
     3721 gatttgacat tttagcccaa acaatataca ctttctttca agagttggat gaataaagta
     3781 ggaaaaaata caaataactg atgtgttatg gactggccat gggcagctca gatgaaacca
     3841 agtccaagac agatatttct acactaatga gctaactcca gggtggctta atgtgttcct
     3901 gaactagccc caagctgtga gcaaagctac tgaccaatga aatgtttaca aacttggatt
     3961 tttggaaaag gcccttagac ctggcttctc tactctctcc gtggataccc atcagcaaga
     4021 agaaataaaa actggcttct ggtgtggtcc tcgcttcagt gactgttgat cttctgacac
     4081 cattgttgag ctcacacatg cccacttgtc ttttaaagac tcggaaacct taaatttcca
     4141 aacttacaaa acatattttc aataagcaag tggtctataa cattttgaag tcaaggagtc
     4201 ttttaagtgt ccagaagtca actttaaata tttgttataa ataaggctac aaaataagaa
     4261 tattttatcc aagagcaaaa ccaatggaaa gcattactcc ttgtgtgatt aagtaatgtg
     4321 ccactcagaa aggaagttgg tacattttaa acatcagaca aatgtattta ttaagaaaat
     4381 gaaatctgaa aagtggaaga ctagaaaaat tcacattttg ttttgtgagt ggtatctctt
     4441 ttgctcctga agagagttta gagaaaaggc tatttcttca tggtggataa accttcttaa
     4501 atcctgggat ctttcaggga gtcagcaccc acagagaatt aaccattgcc tttgaacttg
     4561 cattcatata aagggcatgg atcctattaa atggtaaacg ctttaaaaaa tgaaatattc
     4621 aaaggatcca aatatgtgtg ggcttgaact tgaaagataa gttaaaag
//
