LOCUS       NM_025998               2552 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus Na+/K+ transporting ATPase interacting 1 (Nkain1),
            mRNA.
ACCESSION   NM_025998
VERSION     NM_025998.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Rutledge EA, Benazet JD and McMahon AP.
  TITLE     Cellular heterogeneity in the ureteric progenitor niche and
            distinct profiles of branching morphogenesis in organ development
  JOURNAL   Development 144 (17), 3177-3188 (2017)
   PUBMED   28705898
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Gorokhova S, Bibert S, Geering K and Heintz N.
  TITLE     A novel family of transmembrane proteins interacting with beta
            subunits of the Na,K-ATPase
  JOURNAL   Hum Mol Genet 16 (20), 2394-2410 (2007)
   PUBMED   17606467
REFERENCE   3  (bases 1 to 2552)
  AUTHORS   Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber
            G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong
            WH and Cepko CL.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   4  (bases 1 to 2552)
  AUTHORS   Powles N, Babbs C, Ficker M, Schimmang T and Maconochie M.
  TITLE     Identification and analysis of genes from the mouse otic vesicle
            and their association with developmental subprocesses through in
            situ hybridization
  JOURNAL   Dev Biol 268 (1), 24-38 (2004)
   PUBMED   15031102
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            MH423692.1, FO907130.1 and FQ976844.3.
            
            [WARNING] On Jan 10, 2024 this sequence was replaced by
            NM_025998.5.
            
            On Aug 21, 2018 this sequence version replaced NM_025998.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.717096.1, EF058048.2
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-208               MH423692.1         9756-9963
            209-346             FO907130.1         30248-30385
            347-427             FO907130.1         32096-32176
            428-625             FO907130.1         35393-35590
            626-686             FO907130.1         36774-36834
            687-768             FO907130.1         37287-37368
            769-1608            FO907130.1         37524-38363
            1609-2552           FQ976844.3         2001-2944
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 63.43 cM"
     gene            1..2552
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /note="Na+/K+ transporting ATPase interacting 1"
                     /db_xref="GeneID:67149"
                     /db_xref="MGI:MGI:1914399"
     exon            1..208
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             155..778
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /note="sodium/potassium-transporting ATPase subunit
                     beta-1-interacting protein 1; Na(+)/K(+)-transporting
                     ATPase subunit beta-1-interacting protein 1"
                     /codon_start=1
                     /product="sodium/potassium-transporting ATPase subunit
                     beta-1-interacting protein 1 precursor"
                     /protein_id="NP_080274.2"
                     /db_xref="CCDS:CCDS57302.1"
                     /db_xref="GeneID:67149"
                     /db_xref="MGI:MGI:1914399"
                     /translation="MGKCSGRCTLVAFCCLQLVAALQRQIFDFLGYQWAPILANFLHI
                     MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTS
                     LHRSWWMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFG
                     FVFACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG"
     exon            209..346
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            347..427
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            428..625
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            626..686
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            687..768
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            769..2552
                     /gene="Nkain1"
                     /gene_synonym="2610200G18Rik; 2810426C15Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggaggcgcg gcggagcccg cgcggaccgg gcgcaccatg cacttggggt gcggccggcc
       61 ggccgcggct ctggagaccc ggccctagtc gccggcccca ccgccccggg gcgccatcga
      121 gacgacgcgg ccccgcgcgg cgcgaggagg agccatgggc aagtgcagcg gccgctgcac
      181 gctggtcgcc ttctgctgcc tgcagctggt ggctgcactc cagcggcaga tcttcgattt
      241 cctgggctac cagtgggctc ctatcctggc caacttcctg catatcatgg ctgtcatcct
      301 gggcatcttt ggtaccgtgc agtatcggtc ccggtatctc atcctgtatg cagcctggct
      361 tgtactctgg gttggctgga acgccttcat catctgcttc tacctggaag ttggacagct
      421 atcccaggac cgggacttca tcatgacctt caacacatcc ctgcatcgct cctggtggat
      481 ggagaatggt ccaggctgcc tggtgactcc tgttctgaac tctcgcctgg ccctggagga
      541 ccaccacgtc atctcggtca ctggctgcct gcttgattat ccttacattg aagccctcag
      601 tagtgccctg cagatcttcc tagctctgtt cggcttcgtg tttgcctgtt atgtgagcaa
      661 agtattcctg gaagaggagg acagctttga cttcatcggt ggctttgact cctatggata
      721 ccaggcgccg cagaagacgt cgcatttaca gctgcagcct ctgtacacgt ccggatagct
      781 tctgtcccac ccgcgtacag ttttccctgg accactggag cctgaagcag tgctgtccgg
      841 aggcgcggat cacgataggc aggcgcgccc ctggtggcgc ttaggctaac tgcagcttgt
      901 gcagcctcct ggatctgcag cccctggaga aaatgcggac tctcaagact tgaacttgga
      961 cctgacccta gctctagcag gacttcaggg ttggggcagg acggggcggg ggggaggggg
     1021 aatcactggg tttgtatttt ttttaatctc agccttggta cgtgccgggg tcttcctctt
     1081 tcttcagctc tactccttac ctagtatctt gccctcagtc caaacagcaa gacagaccga
     1141 actcacccca tctcacctct cattcacctg ccctggggaa agatactgtg aactagaagc
     1201 aggagtcctg ggctccagct acggcaccat cactgacatc cggtgtgaca tcgggccgag
     1261 tctttgctcc ctccgggcct cagtttcccc acatcaaata attaaaatta tcccttagtt
     1321 gatgatgctt ctagcactct cgtttggctt tcaattccat gggctacgct gcagatacgg
     1381 aaactaaggc ccagagatgt gaggtgactt gcttgaagcc acacaataag gttttagcag
     1441 aggcaggttt tgaatccggt gtactctagt ttgagactcc ccaatccagt atctggcctc
     1501 tggacttggt ttacaagccc caatctagct tgggcattcc agaacactca catatcacag
     1561 ccaccacgca ccagctccac ccactcttaa agcaatatat cagttcgttc tcttgggagc
     1621 cagacagaca gagcctaaag cccgagctca gcctgaccca caggaggcct ttgtagactc
     1681 aacctgttcc tctttggcaa gcttttaaac ctcgtcctcc aggaaagtgg gacctccact
     1741 cctctgccag gtccctaagc ctgggtccct ctcccatgat cccctcccac cgagcaatcc
     1801 cagtaaccct caattcttcc acctacttct ccattgtggt ctccgagggg aagaagatgg
     1861 tgttcggaag caagcctggg gatatgaaag ggcagaatga gagtgggtga ctatggtcag
     1921 gaggaccaga accccaccat tcttgaggac aaagcagaga ggagggctct tcttcatctt
     1981 cttcctccac agatgccctg aggactgtgt cctcagtagt gcttgctgac ttatgtacag
     2041 agagaacaaa catcagtccc tccaatctgt gaagcggaaa caataggaaa ggcagctaag
     2101 aagcagagga acctagcagg gagcttgcac agtgggggca gttcacacca cactgtggtg
     2161 aacacgtcac tctccgggct tttctgagtt agagcggcaa gcccactcca cgactccatc
     2221 cagcgtgcca cacagaacag ccaagctggg aactccactg gccatcacag tccctgggtc
     2281 gtgagcctaa tcagagggga acaagtttcc tttaggctag gctacctctt gccactgggc
     2341 cacctcccac cagccacact cacttctccc catcccttcc cacagggctc tttctactcg
     2401 agggtttagc cacggatgct tcgaagcctt tggttttata agctgggttt tgcagggggt
     2461 ctgggtttgc ttctcaagac cttatgggct gagacctccc tggtatccat gcaggttggt
     2521 tgattaaaaa aaaaagtgtt ttcttcactg tg
//
