LOCUS       XM_006530758            1484 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus nuclear factor I/X (Nfix), transcript
            variant X4, mRNA.
ACCESSION   XM_006530758
VERSION     XM_006530758.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006530758.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..1484
                     /gene="Nfix"
                     /gene_synonym="CTF; NF-I/X; NF1-X; NFI-X"
                     /note="nuclear factor I/X; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 474 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 15 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18032"
                     /db_xref="MGI:MGI:97311"
     CDS             207..1448
                     /gene="Nfix"
                     /gene_synonym="CTF; NF-I/X; NF1-X; NFI-X"
                     /codon_start=1
                     /product="nuclear factor 1 X-type isoform X4"
                     /protein_id="XP_006530821.2"
                     /db_xref="GeneID:18032"
                     /db_xref="MGI:MGI:97311"
                     /translation="MSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDF
                     VLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGER
                     LYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPN
                     GHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRS
                     ITSPPSTSTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGSPRAT
                     ASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSG
                     QGKVPGSFLLPPPPPVARPVPLPMPDSKTTSTAPDGAALTPPSPSFTTTGASSANRFV
                     SIGSRDGNFLNIPQQSQSWFL"
ORIGIN      
        1 tttctcttgt gtgtgctgaa tcgggtcata gagggagact tcccgtgcaa acagtttgtg
       61 ttggagctgg aggacgcaga gggggagaga gggatgagtt ccacccgttt atcgaggcgc
      121 tgctgcctca cgtccgagcc ttctcctaca cctggttcaa cctgcaggcg cggaagcgca
      181 agtacttcaa gaagcacgag aagcggatgt caaaggacga ggagcgcgca gtgaaggacg
      241 agctgctggg cgagaagcct gagatcaagc agaagtgggc atcccggctg ttggccaagc
      301 tgcgcaaaga catccggccc gagttccgcg aggactttgt gctaaccatc acgggcaaga
      361 agcccccctg ctgcgtgctt tccaaccccg accagaaggg caagatccgg cggattgact
      421 gcctgcgcca ggctgacaag gtgtggcggc tggacctggt catggtgatt ttgtttaaag
      481 ggatcccttt ggaaagtact gatggggagc ggctctacaa gtcgccccag tgctcgaacc
      541 ccggcctgtg tgtccagcca catcacattg gagtcacaat caaagaactg gacctttatc
      601 tggcttactt tgtccacact ccggaatccg gacaatcaga tagttcaaac cagcaaggag
      661 atgcggacat caaaccactg cccaacgggc acttaagttt ccaggactgc tttgtgacgt
      721 ctggggtctg gaatgtgaca gagctggtga gagtatcaca gactccagtt gcgactgcat
      781 cagggcccaa cttctcactg gcggacctgg agagccccag ctactacaac ataaatcaag
      841 tgaccctggg aaggcggtcc atcacctccc ctccttccac cagcaccaag cgccccaagt
      901 ccatcgacga cagtgagatg gagagtccag tagatgatgt gttctatcct gggacaggcc
      961 gctctccggc cgctggcagc agccagtcta gcggatggcc caatgacgtg gatgcaggga
     1021 gcccccgggc cacggcatca gcgctgcact tcccttccac gtccatcatc cagcagtcga
     1081 gcccgtattt cacacaccca accatccgct accaccacca ccatgggcag gactcgctga
     1141 aggagtttgt gcagtttgtg tgctctgacg gctcgggtca ggccaccgga cagcccaacg
     1201 gtagcggcca gggcaaagtc ccggggtcat ttttgctacc gccgccgcct ccagtggcca
     1261 gacctgtgcc ccttcctatg cctgattcca aaaccaccag cacggcccca gacggcgccg
     1321 ccttgactcc tccatcacct tcattcacaa cgacaggcgc ctcctctgcc aaccggtttg
     1381 tcagcatcgg atcccgggac ggcaactttc tgaacatccc acagcagtct cagtcctggt
     1441 tcctctgatt aagatcaaca aagaaacaac taaatttaaa aaag
//
