LOCUS       XM_006530756            1607 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus nuclear factor I/X (Nfix), transcript
            variant X2, mRNA.
ACCESSION   XM_006530756
VERSION     XM_006530756.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006530756.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..1607
                     /gene="Nfix"
                     /gene_synonym="CTF; NF-I/X; NF1-X; NFI-X"
                     /note="nuclear factor I/X; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 558 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 16 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:18032"
                     /db_xref="MGI:MGI:97311"
     CDS             207..1571
                     /gene="Nfix"
                     /gene_synonym="CTF; NF-I/X; NF1-X; NFI-X"
                     /codon_start=1
                     /product="nuclear factor 1 X-type isoform X2"
                     /protein_id="XP_006530819.2"
                     /db_xref="GeneID:18032"
                     /db_xref="MGI:MGI:97311"
                     /translation="MSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDF
                     VLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGER
                     LYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPN
                     GHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRS
                     ITSPPSTSTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLK
                     KSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSP
                     YFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVA
                     RPVPLPMPDSKTTSTAPDGAALTPPSPSFTTTGASSANRFVSIGSRDGNFLNIPQQSQ
                     SWFL"
ORIGIN      
        1 tttctcttgt gtgtgctgaa tcgggtcata gagggagact tcccgtgcaa acagtttgtg
       61 ttggagctgg aggacgcaga gggggagaga gggatgagtt ccacccgttt atcgaggcgc
      121 tgctgcctca cgtccgagcc ttctcctaca cctggttcaa cctgcaggcg cggaagcgca
      181 agtacttcaa gaagcacgag aagcggatgt caaaggacga ggagcgcgca gtgaaggacg
      241 agctgctggg cgagaagcct gagatcaagc agaagtgggc atcccggctg ttggccaagc
      301 tgcgcaaaga catccggccc gagttccgcg aggactttgt gctaaccatc acgggcaaga
      361 agcccccctg ctgcgtgctt tccaaccccg accagaaggg caagatccgg cggattgact
      421 gcctgcgcca ggctgacaag gtgtggcggc tggacctggt catggtgatt ttgtttaaag
      481 ggatcccttt ggaaagtact gatggggagc ggctctacaa gtcgccccag tgctcgaacc
      541 ccggcctgtg tgtccagcca catcacattg gagtcacaat caaagaactg gacctttatc
      601 tggcttactt tgtccacact ccggaatccg gacaatcaga tagttcaaac cagcaaggag
      661 atgcggacat caaaccactg cccaacgggc acttaagttt ccaggactgc tttgtgacgt
      721 ctggggtctg gaatgtgaca gagctggtga gagtatcaca gactccagtt gcgactgcat
      781 cagggcccaa cttctcactg gcggacctgg agagccccag ctactacaac ataaatcaag
      841 tgaccctggg aaggcggtcc atcacctccc ctccttccac cagcaccaag cgccccaagt
      901 ccatcgacga cagtgagatg gagagtccag tagatgatgt gttctatcct gggacaggcc
      961 gctctccggc cgctggcagc agccagtcta gcggatggcc caatgacgtg gatgcaggcc
     1021 ctgcttctct aaagaagtca ggaaagctgg acttctgcag cgccctctcc tctcagggca
     1081 gttccccacg catggctttc acccaccacc cgctgcctgt gcttgctgga gtcagaccag
     1141 ggagcccccg ggccacggca tcagcgctgc acttcccttc cacgtccatc atccagcagt
     1201 cgagcccgta tttcacacac ccaaccatcc gctaccacca ccaccatggg caggactcgc
     1261 tgaaggagtt tgtgcagttt gtgtgctctg acggctcggg tcaggccacc ggacagccca
     1321 acggtagcgg ccagggcaaa gtcccggggt catttttgct accgccgccg cctccagtgg
     1381 ccagacctgt gccccttcct atgcctgatt ccaaaaccac cagcacggcc ccagacggcg
     1441 ccgccttgac tcctccatca ccttcattca caacgacagg cgcctcctct gccaaccggt
     1501 ttgtcagcat cggatcccgg gacggcaact ttctgaacat cccacagcag tctcagtcct
     1561 ggttcctctg attaagatca acaaagaaac aactaaattt aaaaaag
//
