LOCUS       XM_030244940            7254 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus nuclear factor I/C (Nfic), transcript
            variant X2, mRNA.
ACCESSION   XM_030244940
VERSION     XM_030244940.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7254
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..7254
                     /gene="Nfic"
                     /gene_synonym="1110019L22Rik; 1500041O16Rik; NF1-C"
                     /note="nuclear factor I/C; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 21 ESTs, 978 long SRA reads, 3 Proteins, and 98%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 52 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18029"
                     /db_xref="MGI:MGI:109591"
     CDS             1132..2391
                     /gene="Nfic"
                     /gene_synonym="1110019L22Rik; 1500041O16Rik; NF1-C"
                     /codon_start=1
                     /product="nuclear factor 1 C-type isoform X2"
                     /protein_id="XP_030100800.1"
                     /db_xref="GeneID:18029"
                     /db_xref="MGI:MGI:109591"
                     /translation="MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDE
                     ERAVKDELLGEKAEVKQKWASRLLAKLRKDIRPECREDFVLAVTGKKAPGCVLSNPDQ
                     KGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAACAHPVLCVQPHHI
                     GVAVKELDLYLAYFVRERDAEQSSSPRTGVGSDQEDSKPITLDTTDFQESFVTSGVFS
                     VTELIQVSRTPVVTGTGPNFSLGELQGHLAYDLNPASAGMRRTLPSTSSSGSKRHKSG
                     SMEEDVDTSPGGDYYTSPNSPTSSSRNWTEDIEGGISSPVKKTEMDKSPFNSPSPQDS
                     PRLSSFTQHHRPVIAVHSGIARSPHPTSALHFPATPILPQTASTYFPHTAIRYPPHLN
                     PQDPLKDLVSLACDPATQQPGPSWYLG"
ORIGIN      
        1 ggcctgaaaa tatttactct gtggctttta cagaacaaca aaaacgtgag tgaccttgga
       61 gttaatgtgt gaccaggcct tgtctggagc tgggtcccaa ctctcactcc cctcctcccc
      121 cacaaccacc accacgtggt ctgagcatct tgcccaggct ggttttgagc ctgtcaccct
      181 cctgcctcat cccggactgg ctgctctcca acccttcttc tctgttctca catccaaccc
      241 ggagtgggga gctgctagga ttaacagagc acagttagag gtgaaaaggg gagggggcgg
      301 cagctctgag cctgtctccg cgcggttagt ttgagaagtg ccccgcccat ctttggcacc
      361 cgctaccttg tcttcagccc tggagatggc agagccggcg gtgtgctgct ggcttctccg
      421 tgctgttcca cctcagggag gtgaactgcc ctctctgaac tccatgggtt cggttacagg
      481 aatgggaatg tgggtgggga gtaaaggccg ggactagggg ggaatctacc ggatgaagag
      541 gtgagggaag gtgaacgggc gtgcactagc gtgcccaggg cacccaccct caactgtccc
      601 tcaaattcta ggtcaaagct tctggctgcg acttggggcc cgggtgagtg gcagaggatg
      661 gcagaggatc ccagagtgga cgcccgggga ggtgcggcgg aggggtgggg actgccgcgc
      721 tcctgactcc tcccggagtg gggggacacc tggccggagc agagcctgca gcgtggcacc
      781 tgtcactccg ggcgtgcaga ctccactccg cggcctagag gctcttgtct ggcgcgttgc
      841 gccgtgcgcg acccggtgtc gcctgcacgc gtgtccgcga ccgcaagtgt gcacgagcac
      901 gcgcgcgccc gcagacggcg gactcgccgc tggggatgca agcgcggaca ccggagcagc
      961 ggcagcctcg gtctgcagcc gaggaccggc cggagcgcgg gctggggggg aagaggcggc
     1021 ggggggcggg ccgggggagg gtccgcgggc ggggcgggcg gctccccacg cgcctcccca
     1081 cgcgcctccc cacgcgcctc cccgccggcc gtcgcctcgc cgcacagcgc catggatgag
     1141 ttccacccgt tcatcgaggc gctgctgccg catgtgcgcg ccttcgccta cacctggttc
     1201 aacctgcagg cgcgcaagcg caagtacttc aagaagcacg agaagcgcat gtccaaggac
     1261 gaggagcgcg cggtgaagga tgagctgctg ggtgaaaagg ccgaagtgaa gcagaagtgg
     1321 gcgtcgcggc tgctggccaa gctgcgcaag gacatccggc ccgagtgccg tgaagacttc
     1381 gtactggctg tgactggcaa gaaggcgcca ggctgtgtgc tgtccaaccc ggaccagaag
     1441 ggcaagatgc ggcgcatcga ctgcctgcgc caggccgaca aagtgtggcg tctggacctg
     1501 gtcatggtca tcctgttcaa gggcatccca ctggagagca cagatggtga gcggctggtg
     1561 aaggcggctg cctgtgcgca cccggtgctg tgtgtgcagc cgcaccatat tggcgtggcc
     1621 gtcaaggagc tggacctgta cctggcctac tttgtgcggg agcgcgatgc ggagcagagc
     1681 agcagccccc ggacaggtgt gggctcagac caggaggaca gcaagcccat aacgctggac
     1741 accacagact tccaggagag ctttgtcacg tcaggtgtgt tcagtgtcac ggagctgatc
     1801 caagtgtctc ggacacctgt ggtgaccgga accggaccca acttctcact gggagagctg
     1861 cagggtcacc tggcatatga cctgaacccg gccagcgccg gcatgagaag gactctaccc
     1921 agcacctcct ccagtgggag caagcggcac aagtcgggct cgatggaaga ggacgtggac
     1981 acgagccccg gcggcgacta ctacacgtcg cccaactcac ccacgagtag cagccgcaac
     2041 tggacggaag acatagaagg aggcatctca tccccggtga agaagacaga gatggacaaa
     2101 tctccattca acagcccgtc cccccaggac tccccccggc tctccagctt cacacaacac
     2161 cacaggccgg tcatcgcggt acacagtggc atcgcgcgga gcccccaccc gacctcggcc
     2221 ctgcacttcc ctgccacgcc catcctgcca cagacagcct ccacctactt cccccatacg
     2281 gccatccggt acccgccaca tctcaacccc caggacccgc tcaaggatct ggtgtccctg
     2341 gcctgtgacc cggccaccca gcagcctgga ccgtcctggt acctggggta gccgaggttg
     2401 ccttcccatc cctccttcat caccggtgga gtcccagggt gacagtccca gcctgcattt
     2461 ttggtggaaa attagatgga gtgagaagcc ccctgcggac tcccagctgg atggaaaaga
     2521 caggaggaga aaaggacaaa gacaaacagg aaaaaaaaaa caaacccttc ccaaccaaga
     2581 tgacaacaga tgggagctgt gggtctctgg cacctgctgc tgatggacgg ctgcctgcag
     2641 cccttctgcg ccctgagggc tctgccatca cccacagacc aggcaatcct ggcctggtac
     2701 ctgcgcccag caccaacaga tgggcagaat ggacggggtg ggccacccag ccaggccacc
     2761 tctccccaga cccctgctgc cagccaccag cgccagcctc ggggacctcc ggccgtccct
     2821 accgacagtg tttgccaaag acaggaggct ggaggtggac agaccgcacg gtgggcagaa
     2881 gaggctcgag ggagccgccc agcgctggcc ctgctgggga cagacatgcc atacaggtac
     2941 tttgggaccc ctgggagggt cctacgtcca gcctccatct cggtcctctg gccccttctc
     3001 cttgcggacc tcatttggaa ggacacatct ctctatgcaa tttgtcccca ccccaccccg
     3061 gcatgagagg ccacgcagct cccgaccctc cggcctcctc tcgcacatgg aaggtatcag
     3121 cactttgaga aacagaggtg ggggaaccgg gggcccccca cgccgaggtt cctggaggcg
     3181 ggaggtgccg cgatctaagt gcctagccct tccacccacc cgccgtccac ctcgtccatc
     3241 ggggacacag agtggccagg gcaccccacc cttgtctccg tgtaccctag ctccccatca
     3301 ctgcgcgccc tccaagctag agagatggga ccccaggggg ggttagagct gggtgtcccg
     3361 aaaacccagg ctggggctat gcgccgtccc cctacacttc tgccagtgcc ttacttcctg
     3421 gagacccacc ctggggtacc ccactgcagg ggggtacccc ctttgcactt tgaccctcct
     3481 gatgacgtgg ggcccagcac agggaccaag aaggctggtg gaagtgcact cagaccccag
     3541 gtgggagggc tctgggagtg atggggtgac agggtggact gatggctggg gtcccccatc
     3601 tgctatgcgt acttcactga cctataaaca ctaagatggg gtgcaagggc ccagccccag
     3661 ctccacagcc cccatatgca cccaccctgt cgctatcttg gatggcccgc tctgggagat
     3721 gttgggtgtt ttaaggttac tgaacctaca aaggcccctc ctccctgacc acccatcttg
     3781 gcccgtcata cctagcgctg tcatgtcccc tccccgcaga ggccgcaggc catcacccca
     3841 gcagagcccc cagggccagg ccccacccac ctgccacctg tcctccctgg gacacttgta
     3901 agtacaaagc tccccagcct ttgaggcctc aaccccccac catctgtctg tcctcaggga
     3961 ccctccagta gggggaccat tggggacatc acagaagcca ctgtccagat ggggctcagg
     4021 ccagtgggtg tgggatgggc catctgcagg atagacctgg caagtcccct ctgatacccc
     4081 caagccagcc agccgggtcc cccaggggtc aggacagaac caactattta cctaactgca
     4141 tggtgcttaa ggccccgcga cacccaagag ccccctcccc tgccgggctg ctgtgtgcat
     4201 gacaggtcca cctacctgcc cacttccctc accgcctcta ttaaaaaagg aaagaaaaaa
     4261 aaaggataca caaaatatat atataaatat atatatatat ccttaccaaa aaaaaaaaaa
     4321 tccattattt ccaaatttgc acgaactttt taccacaaca tgtgccttgc tctcccgagg
     4381 acaagtatta acttttaaat aatatccgcg cacacagacg catgccctgc acgcatagtt
     4441 acaaacagac aaatgattac atgaaataaa aaataaaatc caaaagggtg gtatttctat
     4501 ttgtaaagaa aagaaaaatc aaatgaaagc aagatttttt ttttttaaat ataagaaggc
     4561 tgggcgtggt ggcgcacgcc tgtgatccta gcccttggga ggctgaggca ggaggattgc
     4621 tctgagttcc aggtcaagtc tgggctacag agtgagacgc tgcctcaaga aaaggggagg
     4681 ggggaccaaa tcatagaaac aaacaagaaa aataacacta ttaaggaagt cacaattggc
     4741 catggttttt gatcccagct cgcccacagc cctggcccca cctcacccca tagtggggga
     4801 ctggagtcgc cttggtgctc attccctgag ccccccaatc ctcctctgtc ttccagccaa
     4861 cccacaaagc tgaatatatg caatatccgt ccgtctgtct gggtcaagct cagctgtggg
     4921 gagtcccagt ggtggagggg acacagcggg cccgttccca agtccgtgat ttcagttttt
     4981 cttttatggt ttcattgttt gtagttgcct ttgggttttt gtctttgttt ttctgtcttt
     5041 tgttaaatct gctcttaaag ttcaccaaag ctaagacagt tgccagggca gacaggagtc
     5101 caggctccaa gctatcccct tgcctctttc tgcccccagc cccacccccc aaccagtctg
     5161 cctgttgccc cactcagccc tgagtgttag gcactggcag agaggcaatg gcaggctcac
     5221 cttgatggag ggactggggt gggtgggact accgccccgc ccacctgtct gcactcctgt
     5281 cacttgtagg cctggctgac ttacagattt ttccttcccc agcttgtgtc cacccctgtg
     5341 ccaggagagg tagcaccatc tcctgggacc atcaaagagt gggctggagt ggggacagtg
     5401 gacagagcat acctggtggc aggttgggag gggccactca gcgtcccccc catttctcag
     5461 aaaatctcca gtcccaccca gggaccccac cctggcccag tcctcaggtg gatgactgac
     5521 gcacggcagg agatttttgt ttttgttttc ctgtatatga aatgtttttc aaaccatcct
     5581 ctcctcaggc caccacccct taccctaacc catcacgccc tggtgaagcc cccaaggcct
     5641 gctgctttgg ggtgtggcct gtgactgtgt ttcccaggtg gggaccagaa gatgtctgag
     5701 gtcctcctga gccctgaaat cttgataatc aggaataccc agggtggtgg gactgacatc
     5761 aggggagtgg cgtctgccca ccccccaccc tgtccctccg ggggtgaacc agccaggctg
     5821 cactacaatg tccacaggca agaggccccc aggccaccag caaatgtccc gcccctgggg
     5881 acagtgcgcc cgctcgccct tggttgtgct gggcagcatt tgtacataca tgcgcgcatt
     5941 tagtttgcag ttaattcctg ctgcgctgcc cacagtggct tcctcccttc agtttgtccc
     6001 tgagacccct gagtggcctt tgcttctcca gggtactggg ttgaagatcc agccacttaa
     6061 tttcccctct gattgttttg atatctgaga gacagaaagg tctccccagg ctggtctcca
     6121 actcctggca atcctcctgc ctctgtttct cagttgctct gacaacaggt gtgtaccacc
     6181 actcctgact tccctgccca aacttcatat cctacttgtt aatagccgtc ttctccctct
     6241 gtcatctacc cagagcattc agcttgggac tgtcgtccag tgcagggccc aggtgagagg
     6301 agactgccag cgagtcccta gatcttgtag ccatgatacc acacagtcat ttcccaatca
     6361 gtgcctcaca catctatctg atggtgcagt tttggggtct gtccccactc ccctcagtcc
     6421 ctacccctgc tcccctcaga catggggcag gaaacagcag gtgcgctggg caggaggaag
     6481 gcatgtgctt cctccccagc caccacccct cccacagcac ccagcctcac taccccagca
     6541 tggggtaccc agctggatac tcccaaaatg tcacatccca tccaacctca gatctgatgc
     6601 agtcatctgt gtcccccaac caaagcccat ttgggtctga gggttccagc gtaaatgcct
     6661 gccctgcagc gcctggcaac tggcaagcat cgggtctgag ggactacaca gggcgcagca
     6721 caaggcgctc atgggtttca gggagtggga gggactgttt ttctccgttg ctcttcctcc
     6781 ttgttttctg ggtgttttcc tgcagagatc ttttgggttt attttgagat tcctcccccc
     6841 aaccccaccc cattcagcca ctttgtattt tactcctggg tcgatgcacc tccgaccttc
     6901 agcttttcct aactgcactt acgtggtctg cagcaacctc tgccccctcc tcccagagca
     6961 gatggggtct ggatggggag cagagggcac cccaggccct tcttgctcca cagtcccccg
     7021 cccgcagcat actccactca taaccgtata ttacaaactc attttggttt ctggcttttt
     7081 gttttgtttt gtggacccgc ctgagcacca ttgactgcct gctgttccgt ttctccctat
     7141 gcaaacaaac aaaaacagtg agggggtcca taaaagattc aataaaaggc aaaaaaaaag
     7201 aaaaaaaaaa gaaaaaagaa aaaaatgtat aaaaattaaa taagcttaag cttc
//
