LOCUS       XM_036154678            7167 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus neogenin (Neo1), transcript variant X13,
            mRNA.
ACCESSION   XM_036154678
VERSION     XM_036154678.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7167
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..7167
                     /gene="Neo1"
                     /gene_synonym="2610028H22Rik; D930014N22Rik; Igdcc2"
                     /note="neogenin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 mRNAs, 19 ESTs, 2440
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 33 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:18007"
                     /db_xref="MGI:MGI:1097159"
     CDS             516..4727
                     /gene="Neo1"
                     /gene_synonym="2610028H22Rik; D930014N22Rik; Igdcc2"
                     /codon_start=1
                     /product="neogenin isoform X13"
                     /protein_id="XP_036010571.1"
                     /db_xref="GeneID:18007"
                     /db_xref="MGI:MGI:1097159"
                     /translation="MAAEREAGRLLCTSSSRRCCPPPPLLLLLPLLLLLGRPASGAAA
                     TKSGSPPQSAGASVRTFTPFYFLVEPVDTLSVRGSSVILNCSAYSEPSPNIEWKKDGT
                     FLNLESDDRRQLLPDGSLFISNVVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLTVA
                     GLPRFTSQPEPSSVYVGNSAILNCEVNADLVPFVRWEQNRQPLLLDDRIVKLPSGTLV
                     ISNATEGDGGLYRCIVESGGPPKFSDEAELKVLQDPEEIVDLVFLMRPSSMMKVTGQS
                     AVLPCVVSGLPAPVVRWMKNEEVLDTESSGRLVLLAGGCLEISDVTEDDAGTYFCIAD
                     NGNKTVEAQAELTVQVPPGFLKQPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDVV
                     IPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHAPATTGPLP
                     SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGVARERVENTSQPGEMQ
                     VTIQNLMPATVYIFKVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSI
                     TVTWETPLSGNGEIQNYKLYYMEKGTDKEQDIDVSSHSYTINGLKKYTEYSFRVVAYN
                     KHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNSKSIVIHWQPPSSTTQNGQITGYKI
                     RYRKASRKSDVTETLVTGTQLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETF
                     ESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKV
                     DYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTVPDPTPMMPPVGVQ
                     ASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTG
                     LKPNTLYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKPRTIIVNW
                     QPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQAR
                     NSKGMGPMSEAVQFRTPKADSSDKMPNDQALGSAGKGSRLPDLGSDYKPPMSGSNSPH
                     GSPTSPLDSNMLLVIIVSVGVITIVVVVVIAVFCTRRTTSHQKKKRAACKSVNGSHKY
                     KGNCKDVKPPDLWIHHERLELKPIDKSPDPNPVMTDTPIPRNSQDITPVDNSMDSNIH
                     QRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQQSVRNTPSTDTMPASSSQTC
                     CTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPLYDPA
                     LPSTPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSY
                     EPDELTKEMAHLEGLMKDLNAITTA"
ORIGIN      
        1 gggaggggag cgggcccgcc gcctgcccct gcgccagctc ggctccaccg ccgcggctgc
       61 ccgcgaagcg accgccggga ttggagcccg gcaggccgcg gggcgcgaag agggtgctcg
      121 tggggaggga ggcgcgcgtg cgcggctgtg agcgtgcgcg gcacggcgcg ctccggcgcc
      181 cgccccccac cccgcggtct ccgcccccct cgctctaccg tgaggagccc gagtcggcgg
      241 cgggtggcgg cgcctggaac ctggagagac cgagccaccc cccggctctc ggccggaatg
      301 tactgattct cctctgctct cctccccgcc ccgctgcagg agggaggcgc ccggagtctt
      361 tccccctggg cgcgcgaggg ggccgcgcgg gccgggccgg gccgggctgg agccgagccc
      421 tgcggcgcag agaccggctg aggcgcgctg agggaagggc gcgagcgctc cgcggcgcta
      481 tcgccgccgc cgccgccgcc actcgtgggg tagagatggc ggcggagcgc gaagccgggc
      541 gactcctctg cacctcctcc tcccggcgct gctgtccgcc accgccgctg ctgctgttgc
      601 tgccgctgct gctgctgctc ggacgcccgg cgtccggcgc cgcggccacg aagagcggct
      661 ccccgccgca gtccgcagga gccagtgttc gaacattcac tccgttttat tttctggtgg
      721 agccagtaga caccctctca gttagaggct cttctgttat attaaattgc tcggcatatt
      781 ctgagccctc tccaaacatt gaatggaaga aagatgggac ttttttaaac ttagaatcag
      841 atgatcgacg ccagctactc ccagatggat ctttattcat cagcaacgtg gtgcattcca
      901 aacacaataa gcctgacgaa ggtttctatc agtgtgtagc cactgtggat aatcttggaa
      961 ccattgtcag cagaacagcc aagctcacag tagcaggtct tccaagattt accagccaac
     1021 cagaaccttc ttcagtctat gttggaaaca gtgcaattct gaattgtgaa gttaatgcag
     1081 atttggtccc atttgttagg tgggaacaga atcgacagcc ccttcttcta gatgacagga
     1141 ttgtcaaact tccaagtgga acactggtta tcagcaatgc tactgaagga gatgggggac
     1201 tctaccgctg cattgttgaa agtggtgggc caccaaagtt tagtgacgaa gctgaattga
     1261 aagttcttca agatcctgag gaaattgtag acttggtatt tctgatgcga ccatcttcta
     1321 tgatgaaagt cactggtcag agtgcagtgt tgccatgtgt tgtctcaggg cttcctgctc
     1381 cagttgttag atggatgaaa aacgaagaag tgcttgacac agaaagctct ggcaggttgg
     1441 tcttgctagc aggaggttgc ttggagatca gtgatgtcac tgaggatgat gctgggactt
     1501 atttttgcat agctgataat ggaaataaga cagttgaagc tcaggcggag cttactgtgc
     1561 aagtgccacc tggattcctg aaacaacctg ctaacatata tgctcacgaa tccatggaca
     1621 ttgtatttga atgtgaagtc actgggaagc caactccaac tgtgaagtgg gtcaagaatg
     1681 gggatgtggt tatccccagt gattacttta aaattgtaaa ggaacataat cttcaagttt
     1741 tgggtctggt gaaatcagat gaagggttct atcaatgcat tgctgagaat gatgttggaa
     1801 atgcacaagc tggagcccag ctgataatcc ttgagcatgc accagccaca acgggaccat
     1861 taccttcagc tcctcgagac gtcgtggcct ccctggtctc tactcgcttc attaaattga
     1921 catggcgtac acctgcatca gaccctcatg gagacaatct cacctactct gtgttctaca
     1981 ccaaggaagg ggttgctagg gagcgtgttg agaataccag ccagccagga gagatgcagg
     2041 tgactattca aaacttgatg ccagcaactg tgtacatctt caaagttatg gctcaaaata
     2101 agcatggctc tggagaaagt tcagctcctc ttcgagtaga gacacagcct gaggttcagc
     2161 tccctggccc agcacctaat atccgtgctt atgcaacgtc acctacttct atcactgtca
     2221 cctgggaaac accgttatct ggcaatgggg aaattcaaaa ttacaaattg tactacatgg
     2281 aaaaaggaac tgataaagaa caggatattg atgtttcaag tcactcctac accattaatg
     2341 gactgaagaa atacacagaa tacagtttcc gagtggtggc ctacaataaa catggtcctg
     2401 gagtttctac acaagatgtt gctgttcgaa cattatcaga tgttcccagt gctgctcctc
     2461 agaatctgtc cttagaagtg agaaattcaa agagtatagt gatccactgg cagccccctt
     2521 cctcaaccac acaaaatggg cagataactg gctacaagat tcgatatcga aaggcctccc
     2581 gaaaaagtga tgtcactgag accttggtaa ctgggacaca gctgtctcag ctgattgaag
     2641 gtcttgatcg ggggacagaa tataacttcc gagtcgctgc tctcacagtc aatggtacag
     2701 gtccagcaac tgattggctg tctgctgaaa cttttgaaag cgacctagat gaaactcgtg
     2761 ttcctgaagt gcccagctct cttcatgtcc gtccgctcgt cactagcatt gtagtgagct
     2821 ggactcctcc agagaaccag aacattgtgg tccgaggtta tgccatcggt tacggcattg
     2881 gcagccctca tgcccagacc atcaaagtgg actataaaca acgttattac accatcgaaa
     2941 acttggatcc aagctctcat tacgtgatta ccttgaaagc atttaacaat gttggcgaag
     3001 gcatccccct ttatgagagt gctgtgacca gacctcacac agtgccagat cccactccca
     3061 tgatgccacc agtgggagtt caggcttcca ttctgagtca cgacaccata aggattacct
     3121 gggcagacaa ctccctgccc aaacaccaga agattacaga ctcccgctac tacacagtcc
     3181 ggtggaagac caacatccca gcaaacacga agtacaagaa tgcaaatgca acgacgttaa
     3241 gctatttggt tactggttta aagccaaata cgctctatga gttctctgtg atggtgacca
     3301 aaggcagaag gtcaagcacg tggagtatga cagctcatgg cgctaccttt gaattagttc
     3361 ctacttctcc acctaaggat gtgacagttg tgagtaagga aggaaaacct agaaccatca
     3421 tagtgaattg gcagcctccc tctgaagcta acggcaagat tacaggttac atcatctatt
     3481 acagcacgga tgtgaatgca gagatacatg actgggttat tgaaccagtt gtgggaaaca
     3541 gactgactca ccagattcaa gagttaacac ttgatacgcc atactacttc aaaatccagg
     3601 cccggaactc aaagggcatg gggcccatgt ctgaagctgt acagttcaga acacctaaag
     3661 cggactcctc tgataaaatg cctaatgacc aagccttagg gtcagcagga aaaggaagcc
     3721 gactaccaga cctgggatct gactacaaac ctccaatgag tggcagcaac agccctcacg
     3781 ggagccccac ctcccctctg gacagcaaca tgctgctggt catcattgtc tctgttggcg
     3841 tcatcactat cgtggtggtt gtggtcattg ctgtcttttg tacccggcgc accacctctc
     3901 accagaagaa gaaacgagct gcgtgcaaat cagtgaatgg ctcccataag tacaagggca
     3961 attgcaaaga tgtgaagcct ccagacctat ggatccatca cgagagacta gagttgaagc
     4021 ctattgacaa gtctccagat cctaaccctg tcatgactga tactccaatc cctcgaaact
     4081 ctcaagatat cacaccagtg gacaattcca tggatagcaa tatccatcaa aggcggaatt
     4141 catacagagg gcatgagtca gaggacagca tgtctacact ggctggaagg aggggaatga
     4201 gaccaaaaat gatgatgccc tttgactctc agccacctca gcaatctgtt cgaaataccc
     4261 ccagcacgga caccatgcca gcgtcctcgt ctcagacgtg ctgcactgac catcaggacc
     4321 ctgagggtgc tactagctcc tcttacttgg ccagctccca agaggaagac tcaggccaga
     4381 gtcttcccac agcccatgtc cgcccttccc accctctgaa gagcttcgct gtgccagcaa
     4441 tcccaccccc aggacctcct ctctatgatc ctgcactgcc aagcacacca ttactgtccc
     4501 agcaagctct gaaccatcac attcactcag tgaaaacagc ctccatcggg acgttaggaa
     4561 ggagccggcc tcctatgcca gtggttgttc cgagtgcccc tgaagtacag gagaccacca
     4621 ggatgctgga agactccgag agtagctatg aaccagatga gctgaccaaa gagatggccc
     4681 acctggaagg actaatgaag gacctaaatg ccatcacaac agcctgatga ccttcgcctg
     4741 gacatgactc caagcctgag tctacaagtc tcggaactta accttgaaaa caaggaattg
     4801 tacagagtac gagaggacag cacttgagag caggagccag caaaccagcc agtgcctcca
     4861 tgtggggttg gctccaggca cagccacctg ccttctcctg gtcagcctgg attacacttg
     4921 tgtggaggca gcttcccttt gcctgctgag agcctgcagg actgggcact atgggccaaa
     4981 attttgtgtc cagggaagag gcaagaagta cgacctgcct tttgctttgt ggtcagtggc
     5041 ttgtgtcttt gtgctgcaac tgcatcactt ttatggagtg tagacattgg catttatgta
     5101 caattttgtg tcctatttta ttttacctta aaacactatc agaagccaag ggagtctgtg
     5161 atgttctctc aagcagttga cacttgactg tggttccagt tacttacgga aagtcatcaa
     5221 cagtgaggtt gtttgacacc actgacaggc attggcttgt tgtgggtttc atttttattc
     5281 ttaattctga gacattgcat cctctgccag ctgttaatcc atcactttga ggggaggaca
     5341 tgttgcattg ctgtttgtaa gcttttttat tattttttta ttataattat taaaggcctg
     5401 actttctcct ctcatcactg tgagattaca gatctatttg aatgaaatgt aacattgaaa
     5461 agacttgttt gttgctttct gtgcagattc agtattgggg tgggattggg gattgggaat
     5521 aggaaatgga ggggctgctg aggccctgtg aatgtttctg tcaatgtact ttgttccaga
     5581 agcctgccga gaatgaaagc agcatcttta gtgtcctttc ctggcatttc catcttcgtg
     5641 tcactgcata gcaactggag ttttgtttgg atctggttat aaattcttgt acagtggatg
     5701 actttggtga tttagctgcc ctggtatctt ggtcatttcc tctttggagt gtccacactg
     5761 aggtctctat caatgtatgt ttaattgctt gagagatgcc aagtagaacc agagcctgac
     5821 tgtgctctga gaagctacaa agcacagggt ggagactccc tttgtgttgc tagtattggt
     5881 tctctctgga aggttaaaat ctaaggcagg atcttggttt cctattccaa ataggatgcc
     5941 tgcttctctg ggcaccagtc ctcagccagg cagctctcgt ggcattgcag aggctctcct
     6001 gaaaaacatc aaccagggtg agagccaaga tggggtggca cccatgacgc ttccccacat
     6061 gtttcttcaa ggagcagagg acagagatag tggaaagagg gtcagcagaa gcaggtgcct
     6121 tcatctatcc cagcagctca gccaaacccc agttagaatg aggcagcagg agattccagg
     6181 tgtgctgagg gttcagccac acgcagaaga cgttgcagag tgttaaagag gtaagctgag
     6241 gtgtgtattt ggttggcttt gttgttgttg ttaatgtata atgaaaagta taagactaac
     6301 cctcaggcct catgttctcc aatagatccc tggaagacag tatagaaagt cagtcgggct
     6361 tgggctcctt agccagtgag actactcaga ccaccagtgg ctagcctagc ctacctgtcc
     6421 ttgaacatgg gtgattttac ccctttgagg tcttaaccct ttttttactt tcaacaagat
     6481 gagctctttg tatgattgcg ggcgggggat atgaaaatgc aatgatctaa ctcctgttgc
     6541 tcttctagct ggtcacatga cggcaccagg cagggttctg ggacacccgg tgtgctttga
     6601 ctgttctaca aaaagctgtc agagcgttct ggcctcctgg aggctagatt cctcagaaac
     6661 tgtctagcct ttgcccacag agcatgctat gtaattagag cactccttcc catgaacccc
     6721 agcacttgtg ttacctcagg gccttggtac ctggatactg ccacagaatt tccatggggc
     6781 gggaagggat gtatttttaa ataaagtaac ttaaaagttg gggaaatttt ttaaattcag
     6841 aaaatgcaaa gctattctgt attacaccat ttcacaattt aatatgtctt atattttcct
     6901 gtgactctgg aaactaaacc attgtgtgtc ttgtcgtgtc ctagttgagc tggggcctag
     6961 cagcttcctt ccagtgggtg tggagcaaac gtgtatgtcg cctcgctacc tgcttgaggg
     7021 gtccgaaggg ctgctgggac tgagttctgt acacacttgt ttggcctttt ctgtagttga
     7081 tgctgtaaaa ctctatggct ttttaaaaac aatttcatgt ttttattttg tattggaagt
     7141 ccaatacact tttttaatcc aatcaaa
//
