LOCUS       NM_023172                725 bp    mRNA    linear   ROD 18-NOV-2024
DEFINITION  Mus musculus NADH:ubiquinone oxidoreductase subunit B9 (Ndufb9),
            transcript variant 1, mRNA.
ACCESSION   NM_023172
VERSION     NM_023172.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Vercellino,I. and Sazanov,L.A.
  TITLE     SCAF1 drives the compositional diversity of mammalian respirasomes
  JOURNAL   Nat Struct Mol Biol 31 (7), 1061-1071 (2024)
   PUBMED   38575788
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 725)
  AUTHORS   Zhu,S., Zhang,J., Wang,W., Jiang,X. and Chen,Y.Q.
  TITLE     Blockage of NDUFB9-SCD1 pathway inhibits adipogenesis : Blockage of
            NDUFB9-SCD1 pathway inhibits adipogenesis
  JOURNAL   J Physiol Biochem 78 (2), 377-388 (2022)
   PUBMED   35122619
  REMARK    GeneRIF: Blockage of NDUFB9-SCD1 pathway inhibits adipogenesis :
            Blockage of NDUFB9-SCD1 pathway inhibits adipogenesis.
REFERENCE   4  (bases 1 to 725)
  AUTHORS   Signes,A. and Fernandez-Vizarra,E.
  TITLE     Assembly of mammalian oxidative phosphorylation complexes I-V and
            supercomplexes
  JOURNAL   Essays Biochem 62 (3), 255-270 (2018)
   PUBMED   30030361
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 725)
  AUTHORS   Poche,R.A., Zhang,M., Rueda,E.M., Tong,X., McElwee,M.L., Wong,L.,
            Hsu,C.W., Dejosez,M., Burns,A.R., Fox,D.A., Martin,J.F., Zwaka,T.P.
            and Dickinson,M.E.
  TITLE     RONIN Is an Essential Transcriptional Regulator of Genes Required
            for Mitochondrial Function in the Developing Retina
  JOURNAL   Cell Rep 14 (7), 1684-1697 (2016)
   PUBMED   26876175
REFERENCE   6  (bases 1 to 725)
  AUTHORS   Brody,M.J., Hacker,T.A., Patel,J.R., Feng,L., Sadoshima,J.,
            Tevosian,S.G., Balijepalli,R.C., Moss,R.L. and Lee,Y.
  TITLE     Ablation of the cardiac-specific gene leucine-rich repeat
            containing 10 (Lrrc10) results in dilated cardiomyopathy
  JOURNAL   PLoS One 7 (12), e51621 (2012)
   PUBMED   23236519
REFERENCE   7  (bases 1 to 725)
  AUTHORS   Wirtz,S. and Schuelke,M.
  TITLE     Region-specific expression of mitochondrial complex I genes during
            murine brain development
  JOURNAL   PLoS One 6 (4), e18897 (2011)
   PUBMED   21556144
  REMARK    Publication Status: Online-Only
REFERENCE   8  (bases 1 to 725)
  AUTHORS   Stylianou,I.M., Christians,J.K., Keightley,P.D., Bunger,L.,
            Clinton,M., Bulfield,G. and Horvat,S.
  TITLE     Genetic complexity of an obesity QTL (Fob3) revealed by detailed
            genetic mapping
  JOURNAL   Mamm Genome 15 (6), 472-481 (2004)
   PUBMED   15181539
REFERENCE   9  (bases 1 to 725)
  AUTHORS   Vizirianakis,I.S., Pappas,I.S. and Tsiftsoglou,A.S.
  TITLE     Differentiation-dependent repression of c-myc, B22, COX II and COX
            IV genes in murine erythroleukemia (MEL) cells
  JOURNAL   Biochem Pharmacol 63 (5), 1009-1017 (2002)
   PUBMED   11911854
  REMARK    Erratum:[Biochem Pharmacol 2002 May 15;63(10):1919]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY079922.1, AK004522.1 and CK128431.1.
            
            On Jul 12, 2018 this sequence version replaced NM_023172.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK128431.1, AV053180.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 BY079922.1         1-9
            10-660              AK004522.1         2-652
            661-725             CK128431.1         630-694
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 25.09 cM"
     gene            1..725
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /note="NADH:ubiquinone oxidoreductase subunit B9"
                     /db_xref="GeneID:66218"
                     /db_xref="MGI:MGI:1913468"
     exon            1..138
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..577
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /note="isoform 1 is encoded by transcript variant 1; NADH
                     dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9;
                     complex I-B22; NADH-ubiquinone oxidoreductase B22 subunit"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 9 isoform 1"
                     /protein_id="NP_075661.1"
                     /db_xref="CCDS:CCDS27495.1"
                     /db_xref="GeneID:66218"
                     /db_xref="MGI:MGI:1913468"
                     /translation="MAFCAPPAYLTHQQKVLRLYKRALRHLESWCIHRDKYRYFACLM
                     RARFEEHKNEKDMMRATQLLREAEEEFWQNQHPQPYIFPDSPGGTSFERYECYKVPEW
                     CLDYWHPSEKAMYPDYFSKREQWKKLRMESWDREVKQLQEETSPDGIMTEALPPARRE
                     GDLPPLWWHIVTRPRERPT"
     exon            139..331
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /inference="alignment:Splign:2.1.0"
     exon            332..445
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /inference="alignment:Splign:2.1.0"
     exon            446..687
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /inference="alignment:Splign:2.1.0"
     regulatory      641..646
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /note="hexamer: AATAAA"
     polyA_site      663
                     /gene="Ndufb9"
                     /gene_synonym="1190008J14Rik; CI-B22"
                     /note="major polyA site"
ORIGIN      
        1 agcccccgcg gcggccgctg aaggtgagcc ggacgctatg gcgttctgcg ctcccccggc
       61 ctacctgacc caccagcaga aggtgctgcg gctgtataag cgcgcgctgc gccacctcga
      121 gtcatggtgt atccacaggg acaagtaccg gtactttgct tgcttgatga gagcccggtt
      181 tgaagaacat aagaatgaga aggatatgat gagggctacc cagctgctga gggaggcaga
      241 agaagaattc tggcagaatc agcatcctca gccgtatatc ttcccagact ctccgggggg
      301 cacttccttc gagagatatg agtgctacaa ggttccagaa tggtgcttag attactggca
      361 tccctctgag aaagcaatgt atcctgatta cttttccaag agagagcagt ggaagaagct
      421 gaggatggag agctgggatc gggaggttaa gcagctgcag gaggaaacat cacctgatgg
      481 tattatgact gaagctttgc ctcctgccag aagggaaggt gacttgcccc cactgtggtg
      541 gcatattgtg accagacctc gggaacggcc cacatagagg caggcccctc actgttcatg
      601 cttgcaagtg agagtttcag agcacgctca cacttgccct aataaaagga actagacacg
      661 ttggctgtgc ctgaagtgtt cttccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
      721 aaaaa
//
