LOCUS       NM_027244               2661 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Mus musculus NADH:ubiquinone oxidoreductase subunit A11 (Ndufa11),
            mRNA.
ACCESSION   NM_027244 XM_895878 XM_924988
VERSION     NM_027244.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Milenkovic,D., Misic,J., Hevler,J.F., Molinie,T., Chung,I.,
            Atanassov,I., Li,X., Filograna,R., Mesaros,A., Mourier,A.,
            Heck,A.J.R., Hirst,J. and Larsson,N.G.
  TITLE     Preserved respiratory chain capacity and physiology in mice with
            profoundly reduced levels of mitochondrial respirasomes
  JOURNAL   Cell Metab 35 (10), 1799-1813 (2023)
   PUBMED   37633273
REFERENCE   3  (bases 1 to 2661)
  AUTHORS   Signes,A. and Fernandez-Vizarra,E.
  TITLE     Assembly of mammalian oxidative phosphorylation complexes I-V and
            supercomplexes
  JOURNAL   Essays Biochem 62 (3), 255-270 (2018)
   PUBMED   30030361
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2661)
  AUTHORS   Combes,A.N., Lesieur,E., Harley,V.R., Sinclair,A.H., Little,M.H.,
            Wilhelm,D. and Koopman,P.
  TITLE     Three-dimensional visualization of testis cord morphogenesis, a
            novel tubulogenic mechanism in development
  JOURNAL   Dev Dyn 238 (5), 1033-1041 (2009)
   PUBMED   19334288
REFERENCE   5  (bases 1 to 2661)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   6  (bases 1 to 2661)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT010491.8.
            
            On or before Apr 9, 2009 this sequence version replaced
            XM_924988.3, XM_895878.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.1886029.1, AA030271.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-181               CT010491.8         72516-72696
            182-274             CT010491.8         75789-75881
            275-397             CT010491.8         76073-76195
            398-2661            CT010491.8         76739-79002
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 29.47 cM"
     gene            1..2661
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /note="NADH:ubiquinone oxidoreductase subunit A11"
                     /db_xref="GeneID:69875"
                     /db_xref="MGI:MGI:1917125"
     exon            1..181
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..510
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /EC_number="7.1.1.2"
                     /note="NADH-ubiquinone oxidoreductase subunit B14.7;
                     CI-B14.7; complex I-B14.7; NADH dehydrogenase (ubiquinone)
                     1 alpha subcomplex 11"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 11"
                     /protein_id="NP_081520.1"
                     /db_xref="CCDS:CCDS50155.1"
                     /db_xref="GeneID:69875"
                     /db_xref="MGI:MGI:1917125"
                     /translation="MAMVKRFFESYHEVPDGTQCHRKTYITTALGGICGIIGSAYSVS
                     LNPADSTLEAVARVGRYTFTAAAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLT
                     LGARTHSYGTAAMGCVYMGTAAALFKIGKLEGWELFPTPKV"
     exon            182..274
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /inference="alignment:Splign:2.1.0"
     exon            275..397
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /inference="alignment:Splign:2.1.0"
     exon            398..2661
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /inference="alignment:Splign:2.1.0"
     regulatory      528..533
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /note="hexamer: AATAAA"
     polyA_site      550
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /note="major polyA site"
     regulatory      2640..2645
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
                     /note="hexamer: AATAAA"
     polyA_site      2661
                     /gene="Ndufa11"
                     /gene_synonym="2010012C24Rik; B14.7"
ORIGIN      
        1 ctcgcgagag ttgacctagc cggctaccct tgagttcgcc cagacgcttt agggtcggcc
       61 gagcaagccc agctaggtat ggcgatggtg aagcggttct ttgaatctta ccatgaggtc
      121 cccgacggca cccagtgtca tcgcaagacc tacatcacca cggccttagg cggcatttgc
      181 ggcataatcg gctccgctta cagcgtctca ctcaaccccg cagattccac cctggaagca
      241 gtggccagag tcggccggta cacattcact gcagctgcta ttggagcgat gtttggcctt
      301 accacctgtg tcagtgccca ggtccgagag aagccagatg accccctgaa ctacttcatt
      361 ggtggctgcg cgggaggcct gacattggga gctcgcactc acagctatgg gacagcagcc
      421 atgggctgtg tctacatggg cactgcggcc gccctgttca agatcggcaa gctggaaggc
      481 tgggagttgt tccctacccc caaggtgtga gccaaacccc tgtgacaaat aaacgctgta
      541 tgttcctgtg tgcaatgtct taaaggcagg cttgctgcat gagatggcca attgggaggg
      601 ggtatagcag aaggcagata agatgacaga ggcctgggcc tgcacttggc acacagggtt
      661 cacaggcagg cccggaagcc cacatgcgcc tgcccgccag cctgctgtgg gctgcccaga
      721 ggccactgac ctggctctgc agatacagct cagagcccca tggtcagcca ccagtgagta
      781 gcaacctggc cacccccacg ctcgggttgt gggcttcccc tcctgggcct attcccaaag
      841 ccaacagctt ctggaaaaca tgcctgggcc ccacatacca gttgctccaa atttctgggc
      901 aatggagcag agagccctgt atgggctgtc ctgtcctgca ggcctccgca agcccaaggc
      961 cagggatgga gtctttcagc ctggccaggt gacacagggc ccagtccctg ccttgtagga
     1021 tccttgccca gcagctgaca gcctttgatt taggtggccc tggaatgcta gcgacgccca
     1081 gcccagcact ggccgagctt cctggcaact gtggaggaag cagtgggctc cagcagcctc
     1141 tggggccata aatcaaggtc tgggtcctgc ctgagaagcc tagctcctga ggcccctgct
     1201 ggacccagac acttgctggg agagggccac atcgtctgcc ctcctggaag cctagacctg
     1261 aaatgagggc cagcctggtg gtatgcatcc cctgcctccc tgaatcccat cctttgtagc
     1321 ctcacgtgcc agctcagggt taccatgagg gctgtttgag ctggacttgg ggctccccaa
     1381 gaaaggaatg ggaaacccca agaggcacag aaggcacagg agcccaggcc ccagagtgct
     1441 gtagctcaga tgtgttccaa ctttgaatcc tgggctcctg gctgtgtccc tcaacacaag
     1501 caccaagcct cagctctgcc ccagaaatgg gaagaacgac ttccctctgg tcatcacgac
     1561 aggtccctcc cagttgggcc ctgtgtacct ggatctgact gtgtccccat aaaggtttga
     1621 atggactgga gtatcttctt gggagtgcag tcctgtaact tcacgtcacg cctccatctt
     1681 ctttcccatc catccaccct gagggacaga ggcgctccac caggacctgg catggtgctg
     1741 ccttgcccac tggtcaccat ggctttgtct tccatgggtc tgacaaggag cattcaaagc
     1801 tgacaccatt ctgctccctg ccccctgcct ttcagggtgc tgctggctct gcacatagcc
     1861 cacccagccc tttctgggcc agctgccagg gctagagtgg cctgccagcc cacccccacc
     1921 ccccagcccc ctgccggcat ccagacctcc agaaaggggc aggatggggt gactgctcac
     1981 cagactcgag ggagccccaa acccaggcta cattggctat aaacatttac tagccagaga
     2041 agggctgacg tcacctccac acagaggccc ccatctggaa tgtcccagca gccttctgta
     2101 tggagcagta ggaccatcat gacaacacag gtccagtctt gtcccctgaa ggcctagaag
     2161 agaccctaag aaggagggcc atcagcagag acagaatgtc ctcggttgat cgcagatctg
     2221 gggatactga acatcccctc tcctgaagtc cacccctaca cacaaggctt ccagaaccct
     2281 ggcctggcca caggtggcgc acgggcctct gctggtgagc acaggtatca acaggagccc
     2341 cacctcttgc ctccatctac ctcagggcca aggctcaagt cctctctgct ccagcggctg
     2401 caccatgttg tcacgtgtca tctcgtcctg tgtgtcccta tgtggaacta ggctaggttt
     2461 tggctgttat acccctcgtc ccatcccagc acatggaatt attgtctgag tgaggcctct
     2521 agttagctgc tggccaccaa ggcctgaact agcaacccag gttcaatctc tgaaatctac
     2581 acagcagaaa cagaacaggc tcccctgggt tgttctctga ctgtggcaca aagtacacaa
     2641 ataaatgtga ttttaaatgc a
//
