LOCUS       NM_011424               8745 bp    mRNA    linear   ROD 14-JAN-2025
DEFINITION  Mus musculus nuclear receptor co-repressor 2 (Ncor2), transcript
            variant 1, mRNA.
ACCESSION   NM_011424
VERSION     NM_011424.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 8745)
  AUTHORS   Ritter,M.J., Amano,I., van der Spek,A.H., Gower,A.C.,
            Undeutsch,H.J., Rodrigues,V.A.P., Daniel,H.E. and Hollenberg,A.N.
  TITLE     Nuclear Receptor Corepressors NCOR1 and SMRT Regulate Metabolism
            via Intestinal Regulation of Carbohydrate Transport
  JOURNAL   Endocrinology 165 (9) (2024)
   PUBMED   39106294
REFERENCE   2  (bases 1 to 8745)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 8745)
  AUTHORS   Abe,Y., Kofman,E.R., Almeida,M., Ouyang,Z., Ponte,F., Mueller,J.R.,
            Cruz-Becerra,G., Sakai,M., Prohaska,T.A., Spann,N.J.,
            Resende-Coelho,A., Seidman,J.S., Stender,J.D., Taylor,H., Fan,W.,
            Link,V.M., Cobo,I., Schlachetzki,J.C.M., Hamakubo,T., Jepsen,K.,
            Sakai,J., Downes,M., Evans,R.M., Yeo,G.W., Kadonaga,J.T.,
            Manolagas,S.C., Rosenfeld,M.G. and Glass,C.K.
  TITLE     RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1beta- and
            RNA-dependent co-activator of osteoclast gene expression
  JOURNAL   Mol Cell 83 (19), 3421-3437 (2023)
   PUBMED   37751740
REFERENCE   4  (bases 1 to 8745)
  AUTHORS   Shimizu,H., Horibata,Y., Amano,I., Ritter,M.J., Domae,M., Ando,H.,
            Sugimoto,H., Cohen,R.N. and Hollenberg,A.N.
  TITLE     Nuclear corepressor SMRT acts as a strong regulator of both
            beta-oxidation and suppressor of fibrosis in the differentiation
            process of mouse skeletal muscle cells
  JOURNAL   PLoS One 17 (12), e0277830 (2022)
   PUBMED   36454860
  REMARK    GeneRIF: Nuclear corepressor SMRT acts as a strong regulator of
            both beta-oxidation and suppressor of fibrosis in the
            differentiation process of mouse skeletal muscle cells.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 8745)
  AUTHORS   Lee,R.D., Knutson,T.P., Munro,S.A., Miller,J.T.,
            Heltemes-Harris,L.M., Mullighan,C.G., Jepsen,K. and Farrar,M.A.
  TITLE     Nuclear corepressors NCOR1/NCOR2 regulate B cell development,
            maintain genomic integrity and prevent transformation
  JOURNAL   Nat Immunol 23 (12), 1763-1776 (2022)
   PUBMED   36316474
REFERENCE   6  (bases 1 to 8745)
  AUTHORS   Kao,H.Y., Downes,M., Ordentlich,P. and Evans,R.M.
  TITLE     Isolation of a novel histone deacetylase reveals that class I and
            class II deacetylases promote SMRT-mediated repression
  JOURNAL   Genes Dev 14 (1), 55-66 (2000)
   PUBMED   10640276
REFERENCE   7  (bases 1 to 8745)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
REFERENCE   8  (bases 1 to 8745)
  AUTHORS   Park,E.J., Schroen,D.J., Yang,M., Li,H., Li,L. and Chen,J.D.
  TITLE     SMRTe, a silencing mediator for retinoid and thyroid hormone
            receptors-extended isoform that is more related to the nuclear
            receptor corepressor
  JOURNAL   Proc Natl Acad Sci U S A 96 (7), 3519-3524 (1999)
   PUBMED   10097068
REFERENCE   9  (bases 1 to 8745)
  AUTHORS   Ordentlich,P., Downes,M., Xie,W., Genin,A., Spinner,N.B. and
            Evans,R.M.
  TITLE     Unique forms of human and mouse nuclear receptor corepressor SMRT
  JOURNAL   Proc Natl Acad Sci U S A 96 (6), 2639-2644 (1999)
   PUBMED   10077563
REFERENCE   10 (bases 1 to 8745)
  AUTHORS   Rubin,W.W. and LaMantia,A.S.
  TITLE     Age-dependent retinoic acid regulation of gene expression
            distinguishes the cervical, thoracic, lumbar, and sacral spinal
            cord regions during development
  JOURNAL   Dev Neurosci 21 (2), 113-125 (1999)
   PUBMED   10449983
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132118.3 and AC139377.4.
            
            On Dec 10, 2011 this sequence version replaced NM_011424.2.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-218               AC132118.3         128530-128747       c
            219-429             AC132118.3         74303-74513         c
            430-557             AC132118.3         69015-69142         c
            558-735             AC132118.3         68150-68327         c
            736-915             AC132118.3         59426-59605         c
            916-1029            AC132118.3         55732-55845         c
            1030-1086           AC132118.3         52176-52232         c
            1087-1139           AC132118.3         47480-47532         c
            1140-1206           AC139377.4         185969-186035       c
            1207-1379           AC139377.4         182109-182281       c
            1380-1473           AC139377.4         181156-181249       c
            1474-1652           AC139377.4         179196-179374       c
            1653-1707           AC139377.4         175445-175499       c
            1708-1806           AC139377.4         173323-173421       c
            1807-1952           AC139377.4         163247-163392       c
            1953-2125           AC139377.4         162091-162263       c
            2126-2188           AC139377.4         160155-160217       c
            2189-2331           AC139377.4         150048-150190       c
            2332-2479           AC139377.4         145226-145373       c
            2480-2533           AC139377.4         143657-143710       c
            2534-3128           AC139377.4         142255-142849       c
            3129-3249           AC139377.4         137060-137180       c
            3250-3418           AC139377.4         136111-136279       c
            3419-3583           AC139377.4         133204-133368       c
            3584-3720           AC139377.4         132176-132312       c
            3721-3823           AC139377.4         131589-131691       c
            3824-3921           AC139377.4         131136-131233       c
            3922-4072           AC139377.4         130291-130441       c
            4073-4213           AC139377.4         128671-128811       c
            4214-4294           AC139377.4         128299-128379       c
            4295-4590           AC139377.4         127641-127936       c
            4591-4945           AC139377.4         126330-126684       c
            4946-5167           AC139377.4         125001-125222       c
            5168-5422           AC139377.4         124287-124541       c
            5423-5572           AC139377.4         123435-123584       c
            5573-5704           AC139377.4         123197-123328       c
            5705-5882           AC139377.4         122936-123113       c
            5883-6298           AC139377.4         121117-121532       c
            6299-6451           AC139377.4         119967-120119       c
            6452-6597           AC139377.4         119733-119878       c
            6598-6791           AC139377.4         119324-119517       c
            6792-6941           AC139377.4         118448-118597       c
            6942-7087           AC139377.4         117816-117961       c
            7088-7141           AC139377.4         117186-117239       c
            7142-7369           AC139377.4         114134-114361       c
            7370-7549           AC139377.4         113126-113305       c
            7550-8745           AC139377.4         111468-112663       c
FEATURES             Location/Qualifiers
     source          1..8745
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 63.96 cM"
     gene            1..8745
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /note="nuclear receptor co-repressor 2"
                     /db_xref="GeneID:20602"
                     /db_xref="MGI:MGI:1337080"
     exon            1..218
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            219..429
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     CDS             325..7731
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /note="isoform 1 is encoded by transcript variant 1;
                     nuclear receptor corepressor 2; TRAC; N-CoR2; T3
                     receptor-associating factor; thyroid-,
                     retinoic-acid-receptor-associated corepressor; silencing
                     mediator of retinoic acid and thyroid hormone receptor;
                     silencing mediator of retinoid acid and thyroid hormone
                     receptor"
                     /codon_start=1
                     /product="nuclear receptor corepressor 2 isoform 1"
                     /protein_id="NP_035554.3"
                     /db_xref="CCDS:CCDS39285.2"
                     /db_xref="GeneID:20602"
                     /db_xref="MGI:MGI:1337080"
                     /translation="MSGSTQPVAQTWRAAEPRYPPHGISYPVQIARSHTDVGLLEYQH
                     HPRDYTSHLSPGSIIQPQRRRPSLLSEFQPGSERSQELHLRPESRTFLPELGKPDIEF
                     TESKRPRLELLPDTLLRPSPLLATGQPSGSEDLTKDRSLAGKLEPVSPPSPPHADPEL
                     ELAPSRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPP
                     IESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAM
                     RKKLILYFKRRNHARKQWEQRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYE
                     KQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQL
                     AVIPPMLYDADQQRIKFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREKFMQHPKN
                     FGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQM
                     ARSSQEEKEEKEKEKEADKEEEKQDAENEKEELSKEKTDDTSGEDNDEKEAVASKGRK
                     TANSQGRRKGRITRSMANEANHEETATPQQSSELASMEMNESSRWTEEEMETAKKGLL
                     EHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKT
                     PAAASEETAFPPAAEDEEMEASGASANEEELAEEAEASQASGNEVPRVGECSGPAAVN
                     NSSDTESVPSPRSEATKDTGPKPTGTEALPAATQPPVPPPEEPAVAPAEPSPVPDASG
                     PPSPEPSPSPAAPPATVDKDEQEAPAAPAPQTEDAKEQKSEAEEIDVGKPEEPEASEE
                     PPESVKSDHKEETEEEPEDKAKGTEAIETVSEAPLKVEEAGSKAAVTKGSSSGATQDS
                     DSSATCSADEVDEPEGGDKGRLLSPRPSLLTPAGDPRASTSPQKPLDLKQLKQRAAAI
                     PPIVTKVHEPPREDTVPPKPVPPVPPPTQHLQPEGDVSQQSGGSPRGKSRSPVPPAEK
                     EAEKPAFFPAFPTEGPKLPTEPPRWSSGLPFPIPPREVIKTSPHAADPSAFSYTPPGH
                     PLPLGLHDSARPVLPRPPISNPPPLISSAKHPGVLERQLGAISQGMSVQLRVPHSEHA
                     KAPMGPLTMGLPLAVDPKKLGTALGSATSGSITKGLPSTRAADGPSYRGSITHGTPAD
                     VLYKGTISRIVGEDSPSRLDRAREDTLPKGHVIYEGKKGHVLSYEGGMSVSQCSKEDG
                     RSSSGPPHETAAPKRTYDMMEGRVGRTVTSASIEGLMGRAIPEQHSPHLKEQHHIRGS
                     ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPPRDLTETYKPRPLDPLGPLKLKP
                     THEGVVATVKEAGRSIHEIPREELRRTPELPLAPRPLKEGSITQGTPLKYDSGAPSTG
                     TKKHDVRSIIGSPGRPFPALHPLDIMADARALERACYEESLKSRSGTSSGAGGSITRG
                     APVVVPELGKPRQSPLTYEDHGAPFTSHLPRGSPVTTREPTPRLQEGSLLSSKASQDR
                     KLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVTGVDLYRGHIPLAFDPTSIPRGI
                     PLEAAAAAYYLPRHLAPSPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHN
                     AASAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAID
                     RLAYLPTAPPPFSSRHSSSPLSPGGPTHLAKPTATSSSERERERERERDKSILTSTTT
                     VEHAPIWRPGTEQSSGAGGSSRPASHTHQHSPISPRTQDALQQRPSVLHNTSMKGVVT
                     SVEPGTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLEGVYPTLMEPVLLPKETSRVA
                     RPERPRVDAGHAFLTKPPAREPASSPSKSSEPRSLAPPSSSHTAIARTPAKNLAPHHA
                     SPDPPAPTSASDLHREKTQSKPFSIQELELRSLGYHSGAGYSPDGVEPISPVSSPSLT
                     HDKGLSKPLEELEKSHLEGELRHKQPGPMKLSAEAAHLPHLRPLPESQPSSSPLLQTA
                     PGIKGHQRVVTLAQHISEVITQDYTRHHPQQLSGPLPAPLYSFPGASCPVLDLRRPPS
                     DLYLPPPDHGTPARGSPHSEGGKRSPEPSKTSVLGSSEDAIEPVSPPEGMTEPGHARS
                     TAYPLLYRDGEQGEPRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHN
                     RNEPEYNIGQPGTEIFNMPAITGAGLMTCRSQAVQEHASTNMGLEAIIRKALMGKYDQ
                     WEEPPPLGANAFNPLNASASLPAAAMPITTADGRSDHALTSPGGGGKAKVSGRPSSRK
                     AKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRL
                     QAGVMASPPPPGLAAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE"
     exon            430..557
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            558..735
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            736..915
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            916..1029
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1030..1086
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1087..1139
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1206
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1207..1379
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..1473
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1474..1652
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1653..1707
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1708..1806
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1807..1952
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            1953..2125
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            2126..2188
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            2189..2331
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            2332..2479
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            2480..2533
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            2534..3128
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3129..3249
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3250..3418
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3419..3583
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3584..3720
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3721..3823
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3824..3921
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            3922..4072
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            4073..4213
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            4214..4294
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            4295..4590
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            4591..4945
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            4946..5167
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            5168..5422
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            5423..5572
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            5573..5704
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            5705..5882
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            5883..6298
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            6299..6451
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            6452..6597
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            6598..6791
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            6792..6941
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            6942..7087
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            7088..7141
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            7142..7369
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            7370..7549
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     exon            7550..8745
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /inference="alignment:Splign:2.1.0"
     regulatory      8722..8727
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /note="hexamer: AATATA"
     polyA_site      8736
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /note="major polyA site"
     polyA_site      8743
                     /gene="Ncor2"
                     /gene_synonym="N-CoR; SMRT; SMRTe"
                     /note="major polyA site"
ORIGIN      
        1 caggagcgga gccgcgggca gcgcaggccg ggccgcatcc ccgtccccgc gccagccgcc
       61 cgcgcccgcc atgcgcgccc cgcagcggcc cgcgcgtccg ggccccgcgt cgtagcgcgg
      121 cgggcggaga ccgcaggctc tcagcccgga cccgccgcat cctcgagccc gatcggcgcc
      181 gtagcccggc gccagcgccc ggtgccgccg ccggcgaggc acctgtgacg aggtcacctg
      241 ccagcagatg accgagacca gcccttagtc ctaggtgtgg tcaagagtgt cttgggctcc
      301 aaagcctacc tggaccctac caccatgtca ggatccacac agcctgtggc acagacatgg
      361 cgggctgctg agccccgcta cccaccccat ggcatctcct acccggtgca gatagcccgg
      421 tcccacacgg acgtggggct gcttgagtac caacaccacc cccgtgacta cacctcacac
      481 ctgtcacccg gttccatcat ccagccacag aggaggcggc cctcactgct gtcagagttc
      541 cagcctggga gtgaacggtc tcaggagctc cacctgcgcc ctgagtcccg cacgttcctg
      601 cctgagctgg gcaagcccga catagaattc accgagagca agcgcccccg cctggagcta
      661 ctacccgata ccctgctgcg cccatcaccc ctgctggcca ctgggcagcc gagtgggtct
      721 gaagacctta ccaaggaccg tagcctggca ggcaagctgg agcctgtgtc acctcccagt
      781 cccccgcacg ctgaccctga gctagagctg gcgccatctc gactgtccaa ggaggagctg
      841 atccagaaca tggaccgcgt ggaccgtgag atcaccatgg tagagcagca gatctccaag
      901 ctgaagaaga agcagcaaca gttggaggag gaggccgcca agccgcccga acccgagaag
      961 cctgtgtcgc caccacccat agaatcaaag caccgaagcc tggtccagat catctacgat
     1021 gagaaccgga agaaagccga agccgcacac cggatcctag aaggcctggg gccccaggtg
     1081 gagctgcctc tgtacaacca gccgtctgac acacgccagt accatgaaaa catcaaaata
     1141 aaccaggcga tgcggaagaa gctgatcttg tactttaagc ggaggaacca cgcgcgcaag
     1201 cagtgggaac agcgcttctg ccagcgctat gaccagctca tggaggcgtg ggagaagaag
     1261 gtagagcgca tagagaacaa tccgcgaagg agggccaagg agagcaaggt gagggagtac
     1321 tacgagaaac agttcccgga gatccgcaag cagcgggagc tgcaggagcg catgcagagc
     1381 agggtgggcc agcgtggcag tgggctctcc atgtcggctg cccgcagtga gcatgaggtt
     1441 tctgagatca ttgatggctt gtctgagcag gagaatctgg agaagcagat gcgccagctg
     1501 gccgtgatcc cgcccatgtt gtacgacgcg gaccagcaga ggatcaagtt catcaacatg
     1561 aatggactca tggatgaccc catgaaggtc tacaaggacc gtcaggttac caacatgtgg
     1621 agcgagcagg agagggacac cttccgtgag aagtttatgc agcaccctaa gaactttggc
     1681 ctgattgcct cattcctgga gagaaagacg gtcgctgagt gtgtcctcta ttactacctg
     1741 accaagaaga atgaaaatta caagagcttg gtgaggcgga gctatcggcg ccgtggcaag
     1801 agccagcagc agcagcagca gcaacaacag cagcagcagc agcagatggc acggagcagc
     1861 caggaggaga aggaggagaa ggagaaggag aaggaggccg acaaggagga agagaagcag
     1921 gatgcggaga acgagaagga agaactcagc aaggagaaga cagacgacac ttctggcgag
     1981 gacaacgatg agaaagaggc cgtggcctcc aaaggccgca aaactgccaa cagccaaggc
     2041 cgccgcaaag gccgtatcac gcgctccatg gccaacgagg ccaaccatga ggagacagcc
     2101 accccacagc aaagttcaga gctggcttcc atggagatga acgagagttc tcgctggact
     2161 gaggaagaga tggagacagc aaagaaaggc ctcctggaac atgggaggaa ctggtcagcc
     2221 attgcccgta tggtgggctc caagaccgtg tcccagtgta agaacttcta cttcaactac
     2281 aagaagaggc agaacctgga cgaaatcctt cagcagcaca agctaaagat ggagaaggag
     2341 aggaacgctc ggaggaagaa gaagaagacc ccagctgcgg cgagcgagga gacagccttc
     2401 ccacctgccg ctgaggacga agagatggaa gcatcaggcg caagtgccaa tgaggaagag
     2461 ctggcggagg aggcagaagc ctcacaggcc tctgggaatg aggttcccag agttggggag
     2521 tgcagtggcc cagctgctgt caacaacagc tctgatactg agagtgtccc atccccgcgt
     2581 tcagaagcca cgaaggacac tgggcctaaa cccactggca ctgaagcatt gcccgctgcc
     2641 acccagccac ctgttcctcc tccagaagaa ccggcagtag cccctgctga gccctcccca
     2701 gtccctgatg ccagtggccc accatcccca gagccttccc catcacctgc cgcacccccg
     2761 gctactgtgg acaaggatga acaagaagcc ccggctgctc cagctcccca gacagaggat
     2821 gccaaggagc agaagtctga ggccgaggag atcgatgtgg gaaagccaga ggagcccgag
     2881 gcctctgagg agcccccgga gagtgtaaag agtgaccaca aggaggagac cgaggaagag
     2941 cctgaagaca aagccaaggg cacagaggcc attgaaactg tgtctgaggc accacttaag
     3001 gtggaggagg ctggtagcaa ggcagctgtg accaagggtt ccagctcagg tgccacccag
     3061 gacagtgact ccagtgccac ctgcagtgcc gatgaggtgg acgaacccga aggaggtgac
     3121 aagggcaggc tgctgtcacc aaggcccagc ctcctcaccc cggctggaga tccccgggcc
     3181 agtacctcgc cccagaagcc gctggacctg aagcagctga agcagcgagc agccgccatc
     3241 ccccctatcg tcaccaaggt ccatgagccc ccccgggagg acacagtacc cccaaagcca
     3301 gttccccctg tgcctccacc cacgcagcac ctacagccag agggtgacgt gtctcagcag
     3361 tcgggaggaa gtccacgtgg caagtcccgc agcccagtgc ctcctgccga gaaagaggca
     3421 gagaaacccg cattctttcc ggctttccca actgagggcc caaagctacc gactgagccc
     3481 ccacgctggt catcgggcct gcccttcccc atccctccac gggaggtgat caagacttcc
     3541 ccacacgccg ctgacccctc tgccttctcc tacacacccc ccggtcaccc gctgcctctg
     3601 ggcctccacg atagtgcccg gcccgtcctg ccacgtcccc ccatctctaa ccccccaccc
     3661 ctcatctcct ctgccaagca tcccggcgta cttgagaggc agctgggtgc catctcccag
     3721 gggatgtcag tccagcttcg tgtgcctcac tcagagcatg ccaaggcccc catgggccct
     3781 ctcaccatgg ggctgcccct tgccgtggac cctaagaagc tggggacagc actgggttcc
     3841 gccaccagtg gaagcatcac caagggcctc cccagtaccc gggctgcaga cggccccagc
     3901 tacagaggct ctatcaccca cggcacgccc gcagacgtcc tctacaaggg taccatcagc
     3961 aggatcgtcg gtgaggacag cccaagtcgc cttgaccggg cacgagagga caccctgccc
     4021 aagggccatg tcatctatga gggcaagaaa ggccacgtcc tatcctatga aggtggtatg
     4081 tccgtgtcac agtgctctaa ggaggatgga aggagcagct cgggcccacc ccatgagact
     4141 gccgccccta aacgcaccta tgacatgatg gagggccgtg taggcaggac tgtcacctca
     4201 gccagcatag agggactcat gggccgcgcc atccctgagc agcacagccc ccacctcaag
     4261 gagcagcatc acatccgagg ctccatcacg caaggcatcc cgaggtccta tgtggaggcg
     4321 caggaggact acttacggcg ggaggccaag ctcttgaagc gagaagggac accaccaccc
     4381 ccaccaccac ctcgggacct gactgagacc tacaagcccc ggcccctgga ccctctgggt
     4441 cccctgaagc tgaagccgac tcacgagggt gtggtagcaa ctgtgaagga ggcgggccgc
     4501 tctatccatg agatcccgag agaggagctg cgccgcacac ctgagctacc cctggcacca
     4561 cggcctctga aggagggttc catcacccag ggcaccccac tcaagtacga ctctggggca
     4621 ccctccactg gcaccaagaa acacgacgtg cgctccatca tcggcagccc cggccggcct
     4681 ttccctgccc tgcacccgct ggacataatg gctgacgccc gggcactgga gcgtgcctgc
     4741 tatgaagaga gtctgaagag ccggtcaggg accagcagtg gtgcaggggg ctccatcaca
     4801 cgtggggctc cagtcgtcgt gcctgaactg ggcaagccac ggcaaagccc actgacttac
     4861 gaagaccacg gggcaccctt caccagtcac ctgccacgtg gctcccctgt gaccacgagg
     4921 gagcccacgc cacgccttca ggaaggcagc ctcctatcca gcaaggcgtc ccaggaccgg
     4981 aagctgacat ctacaccccg ggagatcgcc aagtccccac acagcactgt gcccgagcac
     5041 caccctcacc ccatctcccc ctatgagcac ttgctccggg gcgtgactgg tgtggacctg
     5101 taccgtggtc acatcccatt ggcctttgac cccacctcca taccccgagg gatccctctg
     5161 gaagcagcag ccgcagccta ctacctgccc cggcacttgg cccccagccc cacctaccca
     5221 cacctgtacc caccttacct catccgcggc taccctgaca cggcggccct ggagaaccgc
     5281 cagaccatca tcaatgacta catcacctcg cagcagatgc accacaacgc tgcctccgcc
     5341 atggcccagc gtgctgacat gctgaggggt ctgtcaccgc gagagtcctc gctggccctc
     5401 aattatgccg ctggcccaag aggcattatc gacctgtccc aagtgccaca cctgcccgtg
     5461 ctggtgccac caacgccagg cacccctgcc accgccatcg accgccttgc ctacctcccc
     5521 actgcgcccc cacccttcag cagccgccac agtagctcac cgctgtcccc aggaggcccc
     5581 actcacctag ctaaaccaac tgccacatct tcatcggagc gggaacggga acgtgagcgg
     5641 gaacgagaca agtccatcct cacgtctacc actacagtgg agcatgcacc catctggaga
     5701 cctggtacgg agcagagcag cggggctggg ggcagcagcc gccccgcctc ccacacccac
     5761 cagcactcgc ccatctcccc ccggacccag gacgccttgc agcagaggcc cagtgtgctg
     5821 cacaacacga gcatgaaggg cgtggtcacc tccgtggaac ccggcacgcc cacggtcctg
     5881 aggtccacct ccacctcttc gcctgtccgc ccagctgcca cattcccacc tgccacccac
     5941 tgcccacttg gtggcaccct tgaaggggtc taccctaccc tcatggagcc cgtcctgtta
     6001 cccaaggaga cctctcgggt cgcccggccc gagcggcccc gtgtggacgc tggccatgcc
     6061 ttcctcacca aacccccggc ccgggagccc gcctcctcac ccagcaagag ctccgagccc
     6121 cgatccctag caccccccag ctccagccac acagccatcg cccgcacccc agcaaagaac
     6181 cttgcacccc accatgccag tccggacccg ccggcgccca cctcggcctc agatctgcac
     6241 cgagaaaaga ctcaaagtaa acccttttcc atccaggaat tggaactccg ttctctgggt
     6301 taccacagtg gagctggcta cagccccgat ggggtggagc ccatcagccc ggtgagctcc
     6361 cccagcctga cccacgacaa ggggctctcc aaacctctgg aagagctaga gaagagccac
     6421 ttggaagggg agctgcggca caagcagcca ggccccatga agctcagcgc ggaggctgcc
     6481 catctcccac atctgcggcc actgcccgag agccagccct catctagccc actcctccag
     6541 actgccccag gcatcaaagg tcaccagagg gtggtcacct tggctcagca catcagtgag
     6601 gtcattacgc aggactacac gcgccaccac ccgcagcagc tcagtggccc ccttcccgcc
     6661 cctctctact cctttcccgg agccagctgc cctgtcctgg atcttcgccg cccacccagt
     6721 gacctctacc tcccaccccc cgaccatggc accccagccc ggggatcccc ccacagtgaa
     6781 gggggcaaaa ggtccccaga acccagcaaa acatcggtcc tgggcagcag cgaggatgcc
     6841 attgagcctg tgtccccacc agagggcatg actgagccag gacatgctcg gagcactgcg
     6901 tacccactgc tgtatcgaga cggggaacag ggcgagccca ggatgggctc taagtctcca
     6961 ggcaacacca gccagccgcc agccttcttc agtaagctga ctgagagcaa ctccgccatg
     7021 gtgaagtcga agaagcagga gatcaacaag aaactcaaca cccacaaccg gaacgagcca
     7081 gaatacaata ttggccagcc tgggacggaa atcttcaaca tgcccgccat cactggagca
     7141 ggccttatga cctgtagaag ccaggcggtg caagaacacg ccagcaccaa catggggcta
     7201 gaggccatta ttagaaaggc actcatgggt aaatatgatc agtgggaaga gcccccgccg
     7261 ctcggcgcca atgcttttaa ccctctgaat gccagcgcca gtctgcccgc tgctgctatg
     7321 cccataacca ctgctgacgg acggagtgac cacgcactca cctcgccagg tggaggtggg
     7381 aaagccaagg tctctggcag acctagcagc cgaaaagcca agtcgccagc accaggccta
     7441 gcgtccggag accgaccccc ttctgtctcc tcagtacact cagaggggga ctgcaatcgc
     7501 cgaacaccac tcaccaaccg tgtgtgggag gaccggccct catctgcagg gtccacgcca
     7561 ttcccctaca accctttgat tatgaggcta caggcaggtg tcatggcctc cccgccccca
     7621 cctggccttg cggcaggcag cgggccccta gctggtcccc accacgcctg ggatgaggag
     7681 cccaagccac tgctgtgttc acagtatgag acactctcgg acagcgagtg accacggatt
     7741 gggggggagc ggtgccaggt ccccgcacaa ggcagaagca gcccagcatg gagcagacag
     7801 ctgctgactc ccgagactga ggaaggagcc cctgagtctg cctgcgcgtc catccgtccg
     7861 tccgtccact catctgtcca tccagagctg gcatcctgcc tgtctaaagc cttaactaag
     7921 actcccaccc cgggctggcc ctgcgcagtg accttacact caggggatgt ttacctggtg
     7981 ctcgagaggg gagtggacag gaggggaggg acagcgggcc aggagggggg gggacagcaa
     8041 tcgtgtgtca gtcgcactcg tgcatctggg gcagcgggga cccaccacag gctgaccagg
     8101 cacctccatg ccaccgcctc gccccttacc gcatttggaa ccaaagtcta agctgaactc
     8161 tcgcgtggtc ctgcccctcc ctctgccccc agcccgcttg cgctctggac agacagacgt
     8221 tcccagctta tcctgcccta atgctgtcat catcgcagtc tccaaaggcc acccagccca
     8281 caagactggg agcccatcag accaggtggg tgcacaaggg gccaggcctg gcctggggca
     8341 cggatgcttg caggaactgg accgtttccc ggcctgttgc tgtggcaacg ggagggaagg
     8401 cacgtgtaaa tggtgttggc ttacagggta tatttttgat accttcaatg agttaattca
     8461 gacgtctcac acaaggaagg actcgcccgt gtttctgccg ctgtgctttg gtctctacct
     8521 actgtttcag aggcacgtgc cagccaaggc ggtggcccca ccatacgcag gacttggggg
     8581 tcaggggctc cggcacacgg cactgtgccc ttccccccca cccccttcct tgggcaaaat
     8641 ggacttgatg cgtattctgt ggccgctctc tgtgcacggc ggcattctgt catttacaca
     8701 tgttgttcca attagaaagc aaatatactc aagtgacaac gtttc
//
