LOCUS       NM_001252313            8852 bp    mRNA    linear   ROD 14-JAN-2025
DEFINITION  Mus musculus nuclear receptor co-repressor 1 (Ncor1), transcript
            variant 1, mRNA.
ACCESSION   NM_001252313
VERSION     NM_001252313.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 8852)
  AUTHORS   Ritter,M.J., Amano,I., van der Spek,A.H., Gower,A.C.,
            Undeutsch,H.J., Rodrigues,V.A.P., Daniel,H.E. and Hollenberg,A.N.
  TITLE     Nuclear Receptor Corepressors NCOR1 and SMRT Regulate Metabolism
            via Intestinal Regulation of Carbohydrate Transport
  JOURNAL   Endocrinology 165 (9) (2024)
   PUBMED   39106294
REFERENCE   2  (bases 1 to 8852)
  AUTHORS   Teichmann,T., Malacarne,P., Zehr,S., Gunther,S., Pfluger-Muller,B.,
            Warwick,T. and Brandes,R.P.
  TITLE     NCoR1 limits angiogenic capacity by altering Notch signaling
  JOURNAL   J Mol Cell Cardiol 188, 65-78 (2024)
   PUBMED   38359551
  REMARK    GeneRIF: NCoR1 limits angiogenic capacity by altering Notch
            signaling.
REFERENCE   3  (bases 1 to 8852)
  AUTHORS   Abe,Y., Kofman,E.R., Ouyang,Z., Cruz-Becerra,G., Spann,N.J.,
            Seidman,J.S., Troutman,T.D., Stender,J.D., Taylor,H., Fan,W.,
            Link,V.M., Shen,Z., Sakai,J., Downes,M., Evans,R.M., Kadonaga,J.T.,
            Rosenfeld,M.G. and Glass,C.K.
  TITLE     A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator
            complex formation for inflammatory gene activation
  JOURNAL   Proc Natl Acad Sci U S A 121 (2), e2316104121 (2024)
   PUBMED   38165941
REFERENCE   4  (bases 1 to 8852)
  AUTHORS   Contreras-Jurado,C., Montero-Pedrazuela,A., Perez,R.F., Alemany,S.,
            Fraga,M.F. and Aranda,A.
  TITLE     The thyroid hormone enhances mouse embryonic fibroblasts
            reprogramming to pluripotent stem cells: role of the nuclear
            receptor corepressor 1
  JOURNAL   Front Endocrinol (Lausanne) 14, 1235614 (2023)
   PUBMED   38107517
  REMARK    GeneRIF: The thyroid hormone enhances mouse embryonic fibroblasts
            reprogramming to pluripotent stem cells: role of the nuclear
            receptor corepressor 1.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 8852)
  AUTHORS   Abe,Y., Kofman,E.R., Almeida,M., Ouyang,Z., Ponte,F., Mueller,J.R.,
            Cruz-Becerra,G., Sakai,M., Prohaska,T.A., Spann,N.J.,
            Resende-Coelho,A., Seidman,J.S., Stender,J.D., Taylor,H., Fan,W.,
            Link,V.M., Cobo,I., Schlachetzki,J.C.M., Hamakubo,T., Jepsen,K.,
            Sakai,J., Downes,M., Evans,R.M., Yeo,G.W., Kadonaga,J.T.,
            Manolagas,S.C., Rosenfeld,M.G. and Glass,C.K.
  TITLE     RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1beta- and
            RNA-dependent co-activator of osteoclast gene expression
  JOURNAL   Mol Cell 83 (19), 3421-3437 (2023)
   PUBMED   37751740
REFERENCE   6  (bases 1 to 8852)
  AUTHORS   Alland,L., Muhle,R., Hou,H. Jr., Potes,J., Chin,L.,
            Schreiber-Agus,N. and DePinho,R.A.
  TITLE     Role for N-CoR and histone deacetylase in Sin3-mediated
            transcriptional repression
  JOURNAL   Nature 387 (6628), 49-55 (1997)
   PUBMED   9139821
REFERENCE   7  (bases 1 to 8852)
  AUTHORS   Heinzel,T., Lavinsky,R.M., Mullen,T.M., Soderstrom,M.,
            Laherty,C.D., Torchia,J., Yang,W.M., Brard,G., Ngo,S.D.,
            Davie,J.R., Seto,E., Eisenman,R.N., Rose,D.W., Glass,C.K. and
            Rosenfeld,M.G.
  TITLE     A complex containing N-CoR, mSin3 and histone deacetylase mediates
            transcriptional repression
  JOURNAL   Nature 387 (6628), 43-48 (1997)
   PUBMED   9139820
REFERENCE   8  (bases 1 to 8852)
  AUTHORS   Seol,W., Mahon,M.J., Lee,Y.K. and Moore,D.D.
  TITLE     Two receptor interacting domains in the nuclear hormone receptor
            corepressor RIP13/N-CoR
  JOURNAL   Mol Endocrinol 10 (12), 1646-1655 (1996)
   PUBMED   8961273
REFERENCE   9  (bases 1 to 8852)
  AUTHORS   Horlein,A.J., Naar,A.M., Heinzel,T., Torchia,J., Gloss,B.,
            Kurokawa,R., Ryan,A., Kamei,Y., Soderstrom,M., Glass,C.K. et al.
  TITLE     Ligand-independent repression by the thyroid hormone receptor
            mediated by a nuclear receptor co-repressor
  JOURNAL   Nature 377 (6548), 397-404 (1995)
   PUBMED   7566114
REFERENCE   10 (bases 1 to 8852)
  AUTHORS   Seol,W., Choi,H.S. and Moore,D.D.
  TITLE     Isolation of proteins that interact specifically with the retinoid
            X receptor: two novel orphan receptors
  JOURNAL   Mol Endocrinol 9 (1), 72-85 (1995)
   PUBMED   7760852
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX248411.3 and AL596110.15.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U35312.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-178               BX248411.3         51849-52026         c
            179-315             BX248411.3         47074-47210         c
            316-508             BX248411.3         36386-36578         c
            509-691             BX248411.3         33109-33291         c
            692-805             BX248411.3         24331-24444         c
            806-862             BX248411.3         17921-17977         c
            863-915             BX248411.3         17310-17362         c
            916-982             BX248411.3         14712-14778         c
            983-1155            BX248411.3         11776-11948         c
            1156-1246           BX248411.3         8649-8739           c
            1247-1425           BX248411.3         6016-6194           c
            1426-1480           BX248411.3         4490-4544           c
            1481-1582           BX248411.3         3202-3303           c
            1583-1707           AL596110.15        3648-3772
            1708-1922           AL596110.15        5115-5329
            1923-1985           AL596110.15        7020-7082
            1986-2125           AL596110.15        9836-9975
            2126-2252           AL596110.15        11729-11855
            2253-2799           AL596110.15        14868-15414
            2800-2929           AL596110.15        19067-19196
            2930-3125           AL596110.15        21331-21526
            3126-3286           AL596110.15        29475-29635
            3287-3404           AL596110.15        33802-33919
            3405-3506           AL596110.15        34018-34119
            3507-3607           AL596110.15        35156-35256
            3608-3776           AL596110.15        36944-37112
            3777-3917           AL596110.15        38997-39137
            3918-4001           AL596110.15        43172-43255
            4002-4258           AL596110.15        43602-43858
            4259-4613           AL596110.15        45139-45493
            4614-4835           AL596110.15        47861-48082
            4836-5042           AL596110.15        49425-49631
            5043-5192           AL596110.15        50242-50391
            5193-5342           AL596110.15        50796-50945
            5343-5508           AL596110.15        53829-53994
            5509-6002           AL596110.15        54334-54827
            6003-6131           AL596110.15        57566-57694
            6132-6295           AL596110.15        58351-58514
            6296-6507           AL596110.15        58838-59049
            6508-6651           AL596110.15        61241-61384
            6652-6794           AL596110.15        62861-63003
            6795-6848           AL596110.15        67045-67098
            6849-7070           AL596110.15        67273-67494
            7071-7247           AL596110.15        68948-69124
            7248-8852           AL596110.15        70460-72064
FEATURES             Location/Qualifiers
     source          1..8852
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 38.08 cM"
     gene            1..8852
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="nuclear receptor co-repressor 1"
                     /db_xref="GeneID:20185"
                     /db_xref="MGI:MGI:1349717"
     exon            1..178
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..7435
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="isoform 1 is encoded by transcript variant 1;
                     nuclear receptor corepressor 1; N-CoR1; retinoid X
                     receptor-interacting protein 13"
                     /codon_start=1
                     /product="nuclear receptor corepressor 1 isoform 1"
                     /protein_id="NP_001239242.1"
                     /db_xref="CCDS:CCDS56781.1"
                     /db_xref="GeneID:20185"
                     /db_xref="MGI:MGI:1349717"
                     /translation="MSSSGYPPNQGAFSTEQSRYPSHSVQYTFPSTRHQQEFAVPDYR
                     SSHIEVSQASQLLQQQQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQFHSGPSPVDH
                     DSLESKRPRLEPVSDAHFQRVSAAVLPLVHSLPEGLRSSADAKKDSAFGSKHEAPSSP
                     LAGQPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPP
                     EPEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVY
                     HENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKA
                     KESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQE
                     NNEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFK
                     DKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQIAR
                     PSQEEKVEEKEEDKAEKTEKKEEEKKDDEEKDDKEDSKETTKEKDRTEATAEEPEERE
                     QVTPRGRKTANSQGRRKGRVTRSMTSEAAAANAAAAATEEPPPPLPPPPEPISTEPVE
                     TSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH
                     KQKASRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEGAENSSDTESAPS
                     PSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTKPAERESVEA
                     QVTDSASAETAEPMDVDHEECGAEGSSVLDPPAPTKADSVDPEMQVPENTASKGEGDA
                     KERDLESTSEKTEARDEDVVVAEQIERPEPQSDDDSSATCSADEGVDGEPERQRVFPM
                     DAKPSLLTPPGSILISSPIKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGTPVSGYAL
                     YQRHIKAMHESALLEEQRQRQEQVDLECRSSTSPCSTSKSPNREWEVLQPAPHQVITN
                     LPEGVRLPTTRPTRPPPPLIPSSKTTVASEKPSFIMGGSISQGTPGTYLSSHNQAYPQ
                     EAPKPSVGSISLGLPRQQESTKAAPLTYIKQEEFSPRSQNSQPEGLLVRAQHEGVVRG
                     TAGAVQEGSITRGTPASKISVETISSLRGSITQGTPALPQAGIPTEALVKGPVSRMPI
                     EESSPEKVREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPRTAHEMSLKRSYEAV
                     EGSIKQGMSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSIMQGTPRATAESF
                     EDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQDILTQESRK
                     TPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIKHNVKSLITGPSKLPRGMLEIVPEN
                     IKVVERGKYEDVKAGEPVRARHTSVVSSGPSVLRSTLHEAPKAQLSPGLYDDSSARRT
                     PVSYQNTISRGSPMMNRTSDVSSSKSASHERKSTLTPTQRESIPAKSPVPGVDPVVSH
                     SPFDPHHRSSAAGEVYRSHLPTHLDPAMPFHRALDPAAAYLLQRQLSPTPGYPSQYQL
                     YAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQPLGLPYPATRGIIDLTNMPPT
                     ILVPHAGGTSTPPMDRITYIPGTQVTFPPRPYNAASLSPGHPTHLAAAASAERERERE
                     REKERERERERERERERERIAAAPADLYLRPGSEQPGRPGSHGYVRSPSPSVRTQETI
                     LQQRPSVFQGTNGTSVITPLDPTAQLRIMPLPSGGPSISQGLPASRYNTAADALAALV
                     DAAASAPQMDVSKTKESKHEAARLEENLRSRSAAVSEQQQLEQKNLEVEKRSVQCVCT
                     SSALPSGKAQPHASVVYSEAGKDKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQI
                     ASDKDARERGSQSSDSSSSLSSHRYETASDAIEVISPASSPAPPQEKPQAYQPDMVKA
                     NQAENESTRQYEGPLHHYRSQQESPSPQQQPPLPPSSQSEGMGQVPRTHRLITLADHI
                     CQIITQDFARNQVPSQPSTSTFQTSPSALSSTPVRTKTSSRYSPESQSQTVLHPRPGP
                     RVSPENLVDKSRGSRPGKSPERSHIPSEPYEPISPPQGPAVHEKQDSMLLLSQRGVDP
                     AEQRSDSRSPGSISYLPSFFTKLESTSPMVKSKKQEIFRKLNSSGGGDSDMAAAQPGT
                     EIFNLPAVTTSGAVSSRSHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMSHPVG
                     IMPGSASTSVVTSSEARRDEGEPSPHAGVCKPKLINKSNSRKSKSPIPGQSYLGTERP
                     SSVSSVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTIRMLSSTPPTQIACAPSAI
                     TQAAPHQQNRIWEREPAPLLSAQYETLSDSDD"
     exon            179..315
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            316..508
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            509..691
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            692..805
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            806..862
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            863..915
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            916..982
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1155
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1246
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1425
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1480
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1582
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1583..1707
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1708..1922
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1923..1985
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            1986..2125
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            2126..2252
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            2253..2799
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            2800..2929
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            2930..3125
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3126..3286
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3287..3404
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3405..3506
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3507..3607
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3608..3776
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3777..3917
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            3918..4001
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            4002..4258
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            4259..4613
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            4614..4835
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            4836..5042
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            5043..5192
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            5193..5342
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            5343..5508
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            5509..6002
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6003..6131
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6132..6295
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6296..6507
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6508..6651
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6652..6794
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6795..6848
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            6849..7070
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            7071..7247
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     exon            7248..8852
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /inference="alignment:Splign:2.1.0"
     regulatory      7718..7723
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="hexamer: AAGAAA"
     polyA_site      7777
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="major polyA site"
     regulatory      8250..8255
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="hexamer: AATAAA"
     polyA_site      8275
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="major polyA site"
     polyA_site      8394
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
     polyA_site      8534
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
     polyA_site      8587
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
     regulatory      8618..8623
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
                     /note="hexamer: CATAAA"
     polyA_site      8637
                     /gene="Ncor1"
                     /gene_synonym="5730405M06Rik; A230020K14Rik; mKIAA1047;
                     N-CoR; RIP13; Rxrip13"
ORIGIN      
        1 gttgcttcct agaaacatgg ttgtttgttg gacttgatct cacagcccag tgaggacgtc
       61 tttactgata atgtcaagtt caggttaccc tcccaaccaa ggagctttca gcacagagca
      121 aagtcgttat ccttcacatt ctgtccagta tacctttccc agtacccgac accagcagga
      181 atttgcagtt cctgactacc gctcttctca tattgaagtt agccaggcat cacagctttt
      241 acagcagcag cagcagcagc agcagcttcg aagacgacct tccttgcttt cagaatttca
      301 cccgggttct gacaggcctc aagaaaggag aactggatat gaacagtttc actcaggacc
      361 ctcaccggtg gatcatgatt ccttggagtc caagcgccca cgcctggagc cagtttctga
      421 tgcccatttc cagcgtgtta gtgctgcggt tttaccttta gttcactcgc tgccagaagg
      481 cttgaggtcg tctgcagatg ctaagaagga ttcagcattt ggaagcaaac atgaagctcc
      541 atcctctcct ttggctgggc aaccatgtgg agatgaccaa aatgcttcac cttcaaagct
      601 ttcaaaggag gagttaatac agagtatgga ccgggtagac cgagagattg caaaagtaga
      661 gcagcagatc cttaaattga aaaagaaaca acaacagcta gaagaagaag cagctaagcc
      721 ccctgaacca gagaagcctg tgtcccctcc tcctgtggaa caaaaacacc gtagtattgt
      781 ccaaattatt tatgatgaga atcggaaaaa agcagaagaa gctcataaaa tatttgaagg
      841 tcttggccca aaagttgaac tgccactcta taaccagcca tcagatacca aggtgtacca
      901 tgagaacatc aagacaaacc aggtgatgag gaaaaaactc attttatttt ttaaaagaag
      961 aaatcatgca agaaaacaaa gggaacaaaa aatctgccag cgctatgatc agctcatgga
     1021 agcgtgggag aaaaaagtgg acagaataga aaataatccc cggaggaaag caaaagaaag
     1081 caaaacaagg gaatactatg agaagcagtt tccagaaatt cgaaaacaaa gagaacagca
     1141 agaaagattt cagcgagttg gtcagagggg agctggtctt tcagccacca ttgctaggag
     1201 tgagcatgag atttctgaaa ttattgatgg tctttctgaa caggagaata atgagaagca
     1261 aatgcgtcag ctttctgtga ttccacctat gatgtttgat gcagaacaaa gaagggtcaa
     1321 attcatcaat atgaatgggc tgatggagga tccaatgaag gtttataaag acagacagtt
     1381 tatgaatgtt tggactgacc atgaaaagga gatctttaag gacaagttta tccagcatcc
     1441 aaaaaacttt ggactaattg catcctattt ggaaaggaag agtgttcctg attgtgtttt
     1501 atattactat ttaaccaaga aaaatgagaa ttataaggcc ctcgtgagaa ggaattatgg
     1561 aaaacgcaga ggcagaaatc agcagattgc ccgtccctca caagaagaaa aagtagaaga
     1621 aaaggaagag gataaagcag aaaaaacaga gaaaaaggaa gaagaaaaga aggatgatga
     1681 agaaaaagat gataaggaag actctaaaga aacaaccaag gaaaaggaca gaacggaagc
     1741 cacagcagaa gaacctgaag aaagagagca ggtcactcca agggggcgaa agactgctaa
     1801 cagccaaggc cgccggaagg gccgggtcac caggtcgatg acaagtgaag ctgcagctgc
     1861 caatgctgct gctgcagcca ctgaggagcc cccgccaccc ctgccgccac caccagagcc
     1921 catttctaca gaacctgttg agacttcaag atggacagaa gaagaaatgg aagttgctaa
     1981 aaaaggcctg gtagaacatg gtcgtaactg ggcagccatt gctaaaatgg tgggaactaa
     2041 aagtgaagcc cagtgcaaaa acttctattt taactataaa agacggcata atcttgacaa
     2101 ccttttgcag caacataaac agaaagcttc acggaaaccc cgtgaggaac gagatgtatc
     2161 tcagtgtgaa agtgttgctt ccactgtttc tgcccaagag gatgaagata ttgaagcctc
     2221 aaatgaggag gaaaatccag aagatagtga aggtgctgaa aatagttctg atacagaaag
     2281 tgctccctct ccttcaccag ttgaagctgc caagtccagt gaagacagca gtgaaaatgc
     2341 tgcttctcga ggaaacaccg agcctgtggc tgagcttgag gccaccactg accctgcacc
     2401 ctgtgcatct ccctcttcag cagttccaac cacaaaacca gcagaaaggg aaagcgtgga
     2461 ggcccaggtg accgacagcg ccagtgctga gaccgcagag ccgatggacg tagaccatga
     2521 ggagtgcggt gccgagggca gttctgttct tgatccacca gcccctacca aagccgactc
     2581 cgtggaccca gaaatgcagg taccagaaaa tactgcgtct aaaggtgaag gggatgccaa
     2641 ggaaagagac ttggagagca ccagtgagaa gacagaggct agagatgaag acgtggtagt
     2701 ggctgaacag atcgagaggc ctgagccaca gtcagacgac gactccagtg ccacttgcag
     2761 tgcggatgag ggtgtggatg gagagccaga gaggcagaga gtgtttccca tggatgcaaa
     2821 gccttcattg ttaactcctc ctggatctat cctaatctca tcccctatta aaccaaaccc
     2881 attggatctg ccacagcttc agcatcgagc tgctgttatt ccaccaatgg tttcttgcac
     2941 tccatgtaat ataccaattg gaacgcccgt aagtggctat gctctttacc aacggcacat
     3001 taaggccatg catgagtcag cactcctgga ggagcagcgg cagaggcaag aacaggtaga
     3061 cttggaatgc agaagctcta caagcccatg cagcacttct aagagtccaa acagggagtg
     3121 ggaagtcctc caacctgctc cgcatcaagt gataactaac cttcctgaag gggttcggct
     3181 tccaacaaca cgaccaacca ggccaccacc tcccctcatc ccatcatcta aaaccacagt
     3241 ggcatcagaa aaaccatcct ttataatggg agggtctatc tcacagggaa ctcctggcac
     3301 ttacttgtct tctcataatc aggcttatcc acaagaagcc cctaagccct ccgtggggtc
     3361 tatctctctg ggattgcccc ggcagcagga gtctaccaaa gcagctcctt tgacctacat
     3421 caagcaggaa gaattttctc cgagaagcca aaactcacaa cctgagggtt tattggtcag
     3481 agcgcagcat gaaggtgtgg tcagaggcac tgcaggggct gtccaagaag gaagtataac
     3541 tcggggaact ccagccagca aaatctcagt ggagaccatt tcatcgttgc ggggctctat
     3601 tacccagggg accccagctc tgccccaggc tggaatacca acagaggctt tggtgaaggg
     3661 acctgtctcc aggatgccta ttgaagaaag cagtcctgag aaggtcagag aggaagctgc
     3721 atccaagggc catgttatct atgaaggcaa aagtggacat atcttatcat atgataatat
     3781 taagaatgcc cgagaaggga ctcggagtcc aagaacagct catgaaatga gtttaaaaag
     3841 aagctatgag gcagtggaag gaagtataaa gcaaggcatg tcgatgaggg agtctcctgt
     3901 gtcagcacct ttagagggtc tgatatgccg agcattaccc agggggagcc ctcattctga
     3961 cctcaaagag aggactgtgc tgtctggttc cataatgcag ggcacaccaa gagccacagc
     4021 ggaaagcttt gaggacggcc ttaaataccc caaacagata aaaagggaga gccctcccat
     4081 ccgagcattt gaaggtgcca ttaccaaagg aaaaccatac gatggtatca ccaccatcaa
     4141 agaaatgggg cgctccatcc atgaaatccc acggcaagat attctaactc aggaaagccg
     4201 gaaaactcca gaagtggtcc agagcacgag gccaataatt gagggttcca tttcccaggg
     4261 cacaccaata aaatttgaca acaactcagg tcaatcagct atcaaacaca atgtgaagtc
     4321 cttaatcaca gggcctagca aactaccccg tggaatgctg gaaattgtac cagagaacat
     4381 aaaagtagta gaacggggaa aatatgagga tgtgaaagca ggcgagccag tgcgagcccg
     4441 gcacacgtca gtggtgagct ctggcccctc cgttctcagg tctacacttc acgaagctcc
     4501 caaagcacag ctgagcccgg gactctatga tgacagcagc gctcgcagga ctcctgtgag
     4561 ctaccagaac accatatcca gaggctcccc catgatgaac agaacttctg atgtttcttc
     4621 cagcaagtct gccagtcatg aaaggaaatc aactctgacc ccaacccaaa gagaaagtat
     4681 accagccaag tctccagtgc ccggggtgga tcccgtcgtg agtcacagcc catttgatcc
     4741 tcatcacagg agtagcgctg caggagaggt ttatcggagc cacctaccca cgcacttgga
     4801 tccagctatg ccctttcaca gggctttgga tcctgctgct gcttacctgt tacagagaca
     4861 gctttcacca accccaggat acccaagtca gtaccagctc tatgcaatgg agaatacaag
     4921 gcagacaatc ctcaacgatt acattacctc acagcagatg caggtgaatc tgcgccctga
     4981 tgtcaccagg ggactgtccc cacgagagca gccactgggg ctcccttacc cagctacaag
     5041 aggaatcatt gacctgacca atatgcctcc aacaatctta gtgcctcatg cagggggaac
     5101 gagcacccct cccatggaca ggatcacgta tattcctggt acacaggtta ctttccctcc
     5161 caggccatat aacgctgctt ctctgtctcc aggacaccca acacaccttg cagcagctgc
     5221 aagtgctgag agggaacgag agcgggaaag ggagaaggag cgcgaacgtg agcgcgagcg
     5281 tgagcgtgaa cgtgaacgcg aaaggatcgc tgctgctccc gctgacctct acctacgacc
     5341 aggttcagaa cagccaggcc gtcctggcag ccacggatat gttcgctccc cttccccttc
     5401 agtaagaact caggagacca tcctgcaaca gagacccagt gttttccagg gcaccaatgg
     5461 aaccagtgta atcacacctt tggacccaac tgctcagcta cgcatcatgc cactgccttc
     5521 tgggggccct tccataagtc aaggcctgcc agcctcccgt tacaacactg ctgcggatgc
     5581 cctggctgct cttgtggatg ctgcagcttc tgcaccccag atggatgttt ccaaaacaaa
     5641 agagagtaag catgaagctg ccaggttaga agaaaatttg agaagcaggt cagcagcagt
     5701 tagtgaacag cagcagctag agcagaaaaa cctggaggtg gagaagagat ctgttcagtg
     5761 tgtgtgcact tcttcagccc ttccaagtgg caaggcccag cctcatgcct cagtagtgta
     5821 ttctgaggct gggaaagata aagggcctcc tccaaaatcc agatatgagg aagagctaag
     5881 gacccgaggg aagactacca ttactgcagc taacttcata gacgtgatca tcacccggca
     5941 aattgcctcg gacaaggatg cgagggaacg tggctctcaa agttcagact cttctagtag
     6001 cttgtcttct cacaggtatg aaacggctag tgatgccatt gaggtgataa gtcccgccag
     6061 ctcacctgca ccaccccagg aaaagccaca ggcctatcag ccagacatgg ttaaggcaaa
     6121 tcaagcagaa aatgagtcca ctcgacagta tgaaggtcca ctgcatcatt atcggtccca
     6181 gcaggaatca ccatctccac agcaacagcc accactgccc ccatcttccc agtcagaggg
     6241 aatgggacag gtgcccagga cccatcgact gatcacactt gctgaccaca tctgtcaaat
     6301 tatcacacaa gattttgcta gaaatcaagt tccctcgcag ccttctactt ctacattcca
     6361 aacttcacca tctgctttgt catccacacc tgtaagaact aaaacctcaa gccgctacag
     6421 cccagaatca cagtctcaga ctgtcttgca tcccagacca ggtcctagag tctctccaga
     6481 aaatcttgtg gataaatccc ggggaagcag gcctggaaaa tctccagaga ggagtcatat
     6541 cccatcagag ccctatgagc ccatctcccc accccaaggc cctgctgtgc atgagaagca
     6601 ggacagcatg ttgctcttgt cacagagggg agtggaccct gctgagcaaa ggagtgattc
     6661 tcgatcacca ggaagtataa gctacttgcc ttcattcttc accaagcttg aaagcacatc
     6721 acccatggtt aaatcaaaga aacaggaaat ttttcgtaag ttgaactctt ctggtggagg
     6781 tgactctgat atggcagctg ctcagccagg aacagagatc ttcaatctgc cagcagttac
     6841 cacatcaggt gcagtgagct caagaagcca ttcttttgct gatcccgcca gtaaccttgg
     6901 tctagaagac atcatcagaa aggctctcat gggaagtttt gatgataaag ttgaagatca
     6961 tggtgttgtc atgtcccatc ctgtgggcat tatgcctggt agtgccagca cctcagtggt
     7021 gacgagcagc gaggcacgga gagatgaagg ggagccatca cctcatgcag gagtatgcaa
     7081 accaaagctg atcaacaaat caaacagcag gaagtctaaa tctcctattc ctgggcaaag
     7141 ctatttagga actgaaaggc cttcttctgt ctcctctgtg cattcagaag gtgattacca
     7201 caggcagaca ccaggatggg catgggaaga tcggccctct tcaacaggtt ctactcagtt
     7261 cccttacaac cctctgacca tacggatgct cagcagtaca ccacctacac agatcgcatg
     7321 cgccccatct gccatcaccc aagcagctcc acatcaacag aaccgcatct gggagaggga
     7381 gcctgccccg ctcctctcag cgcagtatga gacactgtct gatagtgacg actgagctgt
     7441 gcgtgggaga gcgctctggc tttggttttt attgaagatt taaaaaaaaa aaaagaaaat
     7501 tattctgccc tcccatgatt tgtgcccaga gacttctcag gagagccagg gccatggatg
     7561 aggaagaaat gatggaaatt catttggaaa atcaaatggg aaaaaacaaa caaaaaaact
     7621 gcctctaata caggcacttc aatggattat aacagtggcg ggttgaagtg tagagttttt
     7681 ttaaagtgga caattcttgt tcttacatct gtttgtaaag aaaaccatga tgtctttaaa
     7741 tcaatcttct gtaaatagat gacttttttg cagtgtatcc ccttgctgta gtatctggtg
     7801 tacttaaatt taaatcagcg aatcaactgg ggagaatttt taaaattctt tgtgtatctt
     7861 tttaacccca gcctctaaac ctcacacagc ccagttccac agtgctggct gtcatgggca
     7921 ttgtactttt gtttcctcta aattcagctt tcccagtgat gtttaaatct tgtggaaata
     7981 tttaggtttt taacacatac cctgtcataa agcctgtatg aggtcagaag acaggagcaa
     8041 cacaactgtc atattgtgag ttccagtgca ggcttggctt tcattggtag cactgaaaaa
     8101 aattactgca tgggtatgtt atagttcagt tttaaagttt aaaggctttt ttgaggcata
     8161 cctcaatgtt tatgcacact ggtaatttaa ccacgccccc taagtattct gcatttgatg
     8221 cagcccaaca aagcttcttt ctgttctgaa ataaattttg actatcctgt ccatagctac
     8281 agtacatcat ttgtgacgta aagagtcttc gtttctcagg tttcaaacaa ttagtataca
     8341 tgcttttctt tagatacaga attggcggag ttaaaaagag aacactgtat agaactttct
     8401 gtcttccagg cttgttttta tgctgcatcg tgaactgacc gttgagcaca gtcctctgca
     8461 tcagtgccca ttctctgctc ctagggaaca gattcttaag gtgcaagtaa tttaaagact
     8521 gaattttaaa ctaattatgg cactgtagga tcacctttat tcattaagaa ttgcttgctg
     8581 tgattcagat ttgttctcct atggcttcct tccactgcat aaagatgctt agtagtgtgt
     8641 gtgtgtgtgt gtgggggggg ggggtaatgc cactaagaac tagaagggag agggagggct
     8701 tcaggaggtc tgagtctcta gaaccactgc ccaagcacct cttagcatct atctacacca
     8761 caggtttctg atcacttttt tatagatgaa ggtgcaggct aggcatttgt ccatataact
     8821 cagcaagtaa gaaagacaga catttgagat ct
//
