LOCUS       XM_036159478            4892 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus NCK-associated protein 5-like (Nckap5l),
            transcript variant X3, mRNA.
ACCESSION   XM_036159478
VERSION     XM_036159478.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4892
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..4892
                     /gene="Nckap5l"
                     /gene_synonym="C230021P08Rik; Cep169"
                     /note="NCK-associated protein 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 9 ESTs, 427 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:380969"
                     /db_xref="MGI:MGI:3609653"
     CDS             256..4227
                     /gene="Nckap5l"
                     /gene_synonym="C230021P08Rik; Cep169"
                     /codon_start=1
                     /product="nck-associated protein 5-like isoform X2"
                     /protein_id="XP_036015371.1"
                     /db_xref="GeneID:380969"
                     /db_xref="MGI:MGI:3609653"
                     /translation="MDQPAGGTGKLRASAGEDDSMELSTCQELLHRLRELEAENSALA
                     QANENQRETYERCLDEVANHVVQALLNQKDLREECIKLKKRVFDLERQNQVLSALLQQ
                     KLQLTANSLPQIPLTPLQPPSERPTSPAPNVSEGPATSLPSGLCAGQREVCWEQQLRP
                     GGPGPPATPPPALDALSPFLRKKAQILEVLRALEETDPLLLCSPATPWRPTGQGPGSP
                     EPINGEPCGPPQPEPSPWAPYLLLGPGSLGALLHWERVLGGPGEEEGIRQPWASSRAP
                     PSAQGPSSGPHCAPGSSSSSSSDEAGDPNEAPSPDTLLGALARKQLNLGQLLGDTETY
                     LQAFLAGATGPLSGDQPGPGKPNSPDPGPPQVSKSKGLPKSAWGASTPEATRLGFGAT
                     SEGQGPLPFLSMFMGAGDAPLGSRPGHPHSSSQVKSKLQIGPPSPGDAQGPLLPSPAR
                     GLKFLKLPPASEKVPSPGGPQLSPQLPRSSRIPCRNSGSDGSPSPLLARRGLGGGELS
                     PEGAQGLPGSPLPCSAMPDSAQLRPSQSTVSTALSPGPVVSPCFENILDLSRSTFRGS
                     PPEPPPSPLQVPTYPQLTLEVPQTPEVLRSPGAPSPGLPESCPYSGPQEKSMDRAGSE
                     SPHASRRTPGGSSKKPGQGSGRRPGDPSHTPLRDRLAALGKLKTGPEGPLGPEKNGVP
                     ARSSAEKARALVRSGECAGDVPPSARPLEQPEAKGIFRGAVALGTSSLKQQEPGLTDP
                     GARVYSSHSMGARVDLEPISPRSCLTKVELAKSRLAGALCPQMPRTPAKVPTSAPSLG
                     KPKSPHSSPTKLPSKSPTKVVPRPVVPLGTKEPPKPDKVKGPPWADCGSTVGQPTSPV
                     AGPADPSQGSEGPAPHSAIEEKVMKGIEENVLRLQGQERTPGSEAKHRNTSSIASWFG
                     LKKSKLPALNRRTEATKNKDGAGGGSPLRKEVKTEARKLEAESLNISKLMAKAEDLRR
                     ALEEEKAYLSRARPRPGGPATVPSPGLGQAQGQLAGMYQGADTFMQQLLNRVDGKELP
                     PKSWREPKPEYGDFQPVSTDPKSPWPACGPRNGLVGPLQGCGKPGKPSSEPGRREEMP
                     SEDSLAEPVSTTHFTACGSLTRTLDSGIGTFPPPDHSSSGTPSKNLPKTKSLRLDPPP
                     GAPPARPPGLTKVPRRAHTLEREVPGIEELLVSGRHPSMPAFPGLLTAPPGHRSHQTC
                     PDDPCEDPGPPPPVQLAKNWTFPNTRTAGSSSDPFLCPPRQLEGLPRTPMALPVDRKQ
                     SVDPSRTSTPQGPAFGGSRTPSTSDMGEEGRVASGGAPGLETSESLSDSLYDSLSSCG
                     SQG"
ORIGIN      
        1 ggtacccccc ttttcctgca cccccctcgc cctcccgccc ccgagatgcg gccatggacc
       61 ctgtggacca agccagtcga gctcagcacc tgatttcggt gaggtgaccc atctggctgc
      121 cagagtgaac gagccagcct gcagaggtca ctagagagtt ttgtcaccct cctcctgcct
      181 tctctccttg cctgttcctg gtctgcctgg gagtagcctg ccaggcctca ttcccagagc
      241 ctgactccca aggtcatgga ccagccggcc ggaggcaccg gaaagctgag ggcatcggct
      301 ggtgaggacg acagcatgga gctcagcacc tgccaggagc ttctgcaccg acttcgggag
      361 ctggaggcag agaactcggc gcttgcgcag gccaatgaga accagcggga gacttacgaa
      421 cgctgtctgg atgaggttgc caaccacgtg gtacaggctc tactgaacca gaaggacctg
      481 cgggaagagt gtatcaaact gaagaagagg gtgtttgacc tggagcggca gaatcaggtg
      541 ttgagtgcac tactgcagca gaaactacag ctcacggcca actccctccc tcagatccca
      601 ctcacaccac tccagccgcc atcagaacga ccaacctccc cagccccaaa tgtctctgag
      661 ggaccagcca cctcactgcc ttcaggactc tgtgctgggc aaagagaggt gtgttgggag
      721 cagcagttac ggccaggcgg tccaggtccc ccggctactc cacccccggc gctggatgcc
      781 ctgtccccat ttcttcggaa gaaagctcag attttagagg tgctgcgagc cttggaagag
      841 acggaccctt tgcttttgtg ctcacctgcc accccctgga gacccacagg ccaaggccct
      901 ggctccccag agcccatcaa tggcgagccc tgtggcccac cgcagcctga accctcaccc
      961 tgggcaccct acctgctgct cggtcctggg agcctggggg cactgctgca ctgggagcgg
     1021 gtcttagggg gccctgggga agaagaaggc atccggcaac cctgggcttc tagcagggcc
     1081 ccaccgtcag cccagggccc cagctccggc ccacactgtg ctccaggcag cagctcctcc
     1141 tcttcttctg atgaagcagg agaccccaat gaggccccca gccccgacac cctgcttggt
     1201 gccctggccc gcaaacagtt aaatctaggc cagctccttg gagacacaga gacttacctc
     1261 caagctttcc tggctggggc gacaggcccc ctcagtggcg accagccagg ccctgggaag
     1321 ccaaactcac cagatccagg acccccacag gtgtccaagt ccaaaggcct cccaaagtca
     1381 gcttggggtg caagtacccc agaggccacc aggctgggct ttggtgctac ctcagagggc
     1441 caggggcccc ttcccttcct cagcatgttc atgggtgcag gggatgcccc gctggggtcc
     1501 cggcctggcc atccccactc ctcatctcag gtgaaaagca agctccagat tgggcccccc
     1561 tcccccgggg acgcccaggg accccttctg ccctctccag ccagaggtct caagtttctc
     1621 aagctgcctc cagcctcaga gaaggtcccc agcccaggag gtccccaact cagtccccag
     1681 cttccccgga gctctcgaat cccttgtcgc aacagtggct cagatggcag cccctcccca
     1741 ttgctggctc gaaggggtct gggtggagga gagctgtccc cagagggggc acagggcctg
     1801 cccggcagcc ctctgccctg ctccgcaatg ccagactctg cgcagctcag accctcccag
     1861 tcgactgtgt ccactgctct gtctccagga cccgtagtgt ctccctgctt tgaaaacatc
     1921 ctagaccttt cccggagcac ctttaggggt tctcccccag aaccacctcc ttccccgctg
     1981 caggtgccca cctacccaca attgactctg gaggtgcccc agacccctga ggtcctcagg
     2041 agccctgggg cccccagccc tggccttcca gaatcttgtc cctacagcgg cccccaggag
     2101 aagagcatgg acagggcagg ctctgagtct ccccatgcca gccgcaggac cccgggtggc
     2161 tcatccaaga agcctggcca gggatctggg cgacgacctg gtgatcctag ccacacacct
     2221 ctgcgagaca gattggcagc acttgggaaa ctgaagacag gccccgaggg gcctctgggt
     2281 ccagaaaaga atggggtgcc agcccggtct agcgctgaga aggccagggc actagtgcgg
     2341 tctggtgagt gtgctggaga cgtgccgccc agcgcaagac ctctggagca gccagaagct
     2401 aagggtatct ttcggggagc agtggccttg ggcacaagca gcctgaagca gcaggaaccg
     2461 ggacttacag atcctggtgc cagagtctac tcctctcatt ccatgggagc tcgagtggac
     2521 ctggagccca tctcaccgag gagctgcctc accaaagtgg agctggccaa gagtcggcta
     2581 gcaggggctc tgtgtcccca gatgccccgc acacctgcaa aagtgccaac ctcagcccct
     2641 agcctgggca aacccaaaag ccctcacagc agcccgacaa agctaccctc caagtccccc
     2701 accaaggtgg taccccgccc tgtggtaccc ttaggcacca aggagccccc caagcctgac
     2761 aaagtgaagg gcccaccctg ggcagattgt ggcagcacag ttggccagcc tacatcccca
     2821 gtagccggcc ccgccgaccc aagccagggc tcagaagggc cagccccaca ctcggccatc
     2881 gaggagaagg tgatgaaggg cattgaggag aacgtgctgc gccttcaagg tcaggaacgg
     2941 actccgggct ccgaagccaa acaccgcaac accagcagca tcgccagctg gtttggcctt
     3001 aaaaagagca agctgccggc tctgaaccgc cgcactgagg ctaccaaaaa caaggacggg
     3061 gccggtgggg gctccccact ccggaaagaa gtcaagacgg aagcccggaa gctggaggct
     3121 gagagcctca acatctccaa gctgatggcg aaggcagaag acctgcgccg agccctagag
     3181 gaagagaagg cgtacctgag cagagcccgc ccacggcctg ggggcccagc caccgtgccc
     3241 agtcctggtc tggggcaggc gcaaggccag ctagccggca tgtatcaggg tgcagacacc
     3301 ttcatgcaac agctactgaa cagggtggat ggcaaggagc tgccccccaa gagctggcgg
     3361 gaacccaagc ctgagtatgg ggatttccag ccagtgtcca ctgaccccaa gagcccctgg
     3421 cctgcctgtg ggcctcggaa tggcctggta ggcccactcc agggctgcgg aaaacctggg
     3481 aagcccagca gtgagccagg aaggcgggaa gagatgccct ctgaagacag cctggcggag
     3541 ccagtttcca ccacgcactt cacagcctgc ggctccttga ctcgaacctt ggacagtggc
     3601 attgggacct tcccaccccc agatcacagc agcagcggaa cccccagcaa aaatctcccc
     3661 aagaccaagt cactgcgcct ggatccccca ccaggggcac ccccagctcg gcctccaggc
     3721 ctcaccaaag tcccccgccg tgcccacaca ctagagcgag aggtgccggg catagaggag
     3781 ctgctggtga gtgggcgaca ccccagcatg ccagccttcc ctggactgct cacagctccc
     3841 ccaggccacc gaagccatca gacctgtccc gatgatccct gtgaagaccc aggccctccc
     3901 ccacctgtcc agctggccaa gaactggacc ttccccaaca ccagaacagc tggcagctcc
     3961 agcgacccct tcctgtgccc accccgacaa ctggagggac tgcctagaac ccccatggcc
     4021 ctgcccgtag accgaaaaca gagcgtggat cccagccgca catctacacc tcagggccca
     4081 gcatttggag gcagtcgtac ccccagcacg tcggacatgg gcgaggaagg ccgagtggcc
     4141 agcgggggcg cccccgggct ggagacctca gaatccctaa gtgactccct ctatgactcg
     4201 ctatcctcct gtgggagtca gggttgaggg accgcaccca ctacagttcc tctggagcta
     4261 gggaccctca acgacctgct tccgcgctcc acgccccacg cctttgggcc ggtgaagctt
     4321 gacctgaagg gaccaaggag aaagaggata agaaggcgat ggggggtccc tggcgtatgc
     4381 cactgctgct gtggatgcga caaccatgct cagctcaggg agagacctca tccccagtcc
     4441 cttgactccc ccagagtaag gctctgctct acgggaccgg gggctccagg ctgctttgtc
     4501 ccagctccca cttcaggccg agccatcttg cggtgctagg cttcctgccc gccagctgtg
     4561 ccacctctgc ccaacctggc tgcaaccctg ccccaaagcc cccatggggc tgattttgga
     4621 agccccaggc ttatggagtt tgggggtgag ggggacaagt cgccttcact ctgccctggt
     4681 cctccctgct gtctgaatgg tgctgcctcc cttccccaca tcgtggggtc tgtttgtctg
     4741 tcttcatctt tgtttttata tatatatata tatataagcg cctggcccag tccccacccc
     4801 tacccgcact gcggttaatt tatctgttgt tgaaaagcag ccctgcttct gcagcatccc
     4861 taataaaacg tggaggcctc tccccaccgt ga
//
