LOCUS       NM_025400               1216 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus N-acetyltransferase 9 (GCN5-related, putative) (Nat9),
            transcript variant 2, mRNA.
ACCESSION   NM_025400
VERSION     NM_025400.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL606487.15.
            
            On May 3, 2018 this sequence version replaced NM_025400.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK148048.1, BC011315.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-281               AL606487.15        13686-13966
            282-370             AL606487.15        14248-14336
            371-480             AL606487.15        15969-16078
            481-624             AL606487.15        16459-16602
            625-684             AL606487.15        17401-17460
            685-779             AL606487.15        17636-17730
            780-1216            AL606487.15        17820-18256
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 80.68 cM"
     gene            1..1216
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /note="N-acetyltransferase 9 (GCN5-related, putative)"
                     /db_xref="GeneID:66176"
                     /db_xref="MGI:MGI:1913426"
     exon            1..281
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            282..370
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            371..480
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            481..624
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            625..684
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            685..779
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            780..1216
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1193..1198
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      1213
                     /gene="Nat9"
                     /gene_synonym="1110028N05Rik"
                     /note="major polyA site"
ORIGIN      
        1 gctgccgtct gcctggcgga agcggacagc aagcccctct acgcgcatgc ggaaagcctg
       61 tttctccggg acagacgctg acgcctgtcg ttggggacgc cttcctcggc agggggtggt
      121 tgtgagcttt gcagtttgca aactacagcg cttagacggc cgaggaacca cgcaaagggc
      181 tgaggcctga gaactttgag tggggcttgg ggacaggaaa acggaagggc cagagccgag
      241 tgacgtggac tctggacgct ggaggctagg gttggaaaca gtaggcagct acaatgaagc
      301 tgaatcagaa caccatgcta gtgggcaaga aggtggtcct ggtaccctac acctccgagc
      361 atgtgcccag ataccacgag tggatgaagt cagaagaact gcggcatctg acagcctcag
      421 agcagctgac cctacagcag gagtatgaga tgcagtgtag ctggtgtgaa gatgaagaca
      481 agtgcacctt cattgtgctg gatgcagaga aatggcaggc ccagcctcgg ccccctgaag
      541 agagctgcat ggtgggagat gtgaacctct tcctcacaga ccttgaagac cccaccttgg
      601 gggagatcga ggtcatgatt gcagagccta gctacaggcg gcagggactt ggcactgagg
      661 cgtctctcct gatcatgtcc tacggtgtga cgaagttagg tctgaccaag tttgaggcca
      721 aaatcgggca agaaaatgaa cctagcatcc ggatgttcca gaaacttcac tttaagcagg
      781 tggctatgag caacgtcttc caggaggtga cactcaggct ggcagtgagc gagccagagc
      841 ggaagtggat tctagagcag acgagccaca tggaagagag accctacagg accaggaagg
      901 ccgagcctgt gacagccacc ctgagcgagc agaagagttg gaactgccca ctcccaaggc
      961 cagacggctg catgggagac acaagtgcag tctcttcagt ctgcgccagg ctctcctgag
     1021 ccagccatgg cctcccctgg ttagcagtgg tcaagaacac tcgccaactc cgagccacac
     1081 actgaccctg actgcacagg aaggggtggc tggagcccat caaaagtcag ggtggaggtg
     1141 gggactggaa cggatggatg tggagagcca gccttccctg gggccctggc tgagtaaagc
     1201 actcgtttgg gcagct
//
