LOCUS       NM_001081283            4765 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus NALCN channel auxiliary factor 2 (Nalf2), mRNA.
ACCESSION   NM_001081283 XM_884991
VERSION     NM_001081283.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX000691.12.
            
            On Jul 28, 2018 this sequence version replaced NM_001081283.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR11927934.7585053.1,
                                           SRR10662773.806333.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1763              BX000691.12        38261-40023
            1764-1935           BX000691.12        63486-63657
            1936-4765           BX000691.12        64057-66886
FEATURES             Location/Qualifiers
     source          1..4765
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 43.59 cM"
     gene            1..4765
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /note="NALCN channel auxiliary factor 2"
                     /db_xref="GeneID:620592"
                     /db_xref="MGI:MGI:3648377"
     exon            1..1763
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /inference="alignment:Splign:2.1.0"
     CDS             906..2321
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /note="likely orthologue of H. sapiens transmembrane
                     protein 28 (TMEM28); transmembrane protein FAM155B"
                     /codon_start=1
                     /product="NALCN channel auxiliary factor 2"
                     /protein_id="NP_001074752.1"
                     /db_xref="CCDS:CCDS41072.1"
                     /db_xref="GeneID:620592"
                     /db_xref="MGI:MGI:3648377"
                     /translation="MFRGAWMWPGKDAAALTICCCCCCWAPRQSDKPCADSERAQRWR
                     LSLASLLFFTVLLADHLWLCAGARPRARELSSAMRPPWGAGRERQPVPPRAVLPPPPP
                     SPGEPSASSGTCGPRYSNLTKAAPAAGSGPVCNGVPEPTGLDAACTKLESLQRLFEPT
                     TPAPPLRPPDSPSRAPEFPSAKKNLLKGHFRNFTLSFCDTYTVWDLLLGMDRPDSLDC
                     SLDTLLGDLLAVVASPGSGTWEACSNCIEAYQRLDRHAQEKYDEFDLVLHKYLQAEEY
                     SIRSCTKGCKAVYKAWLCSEYFSVTQQECQNWVPCKQYCLEVQTRCPFILPDNEEMVY
                     GGLPGFICTGLMDTSPKRPETKCCDVQWVSCESEKKKFKDSEPPKTHHQQFHHSYFHH
                     YHHQYHHYHPRHEPPSRVSNKPSLLPVSGGSRLSPSRIRLCVLVLILLHTVVSFSSSQ
                     SGGGLGLETLPALEEGLTQEE"
     exon            1764..1935
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /inference="alignment:Splign:2.1.0"
     exon            1936..4765
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4747..4752
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /note="hexamer: AATAAA"
     polyA_site      4765
                     /gene="Nalf2"
                     /gene_synonym="EG620592; Fam155b; Tmem28; Tnen28"
                     /note="major polyA site"
ORIGIN      
        1 acactcgcac acgggctctc aaggtgttct ccgcacagcg gaagatggcg acagactgag
       61 ggggcatggc cagcgggagc cacggggcca tgcctttggg cggccgccac agcggggcga
      121 agcagaggcg gaagcgagag gcgcactaag taaagccggg cgtccgcgtc cggcgtctgt
      181 ggcgctgcgg ggagccaggt ggcccgcccg agccggaact ccgggagccg cgggtgcgga
      241 gccagagcgg agccggcccg ggaccggccc cagcggactg ccagagcgcg agggaagccc
      301 gaagggccgg cggcggaccg gccggccggc ctaggagggc acgagcgagg cggggagctg
      361 cacggagcgg gcagcgggca gcgggcagac gggcgggaga ggagcggcgc gggcgagggg
      421 agcggagtgg agcgcggcgg ggcccgcacg gcggcgctga ggggcgcaga gccgcgccga
      481 gccgagacgg acggccagag cagagtgcga gccagggggc cgggggcgcg gagtgaagtg
      541 gcgcggagcc cggggtagcg gaggggcccg acaccatgag gagtgcggcg ccgccgccgc
      601 agccgccacc gccccagtgc cccgcaccgc cccccgccgg gacgccgggc tgcgcctagc
      661 gggccgggcg gcggcgcccc ggctgccagc aggggagcgc gggaggggcg cggggacggc
      721 ccgagagcgc cccgccacaa cggcctgagc ggggccccgg gccggccggc ctgcctagcc
      781 atgcggcccc cgaggtaaag cctggacggc gctgaggagc gcggtgcggt gcgcagcccg
      841 ccctcccgag acggccgtcc ggcctcgcgc ctgcctactc cctccagccc ggacccccct
      901 gaaatatgtt caggggcgct tggatgtggc ccgggaaaga cgccgccgcg ctgactatct
      961 gctgctgctg ctgctgctgg gctcccaggc agagcgacaa accttgcgcc gattcggagc
     1021 gggcgcagcg atggcgactg tccctggcgt ccctgctctt cttcaccgtg ctgctcgctg
     1081 accatctgtg gctgtgcgcg ggggcccggc cccgggccag ggagctgagc agcgccatgc
     1141 ggccgccctg gggggccggc cgcgagcggc agccggtacc tcctcgcgcg gtgctgccgc
     1201 cgccgccgcc gtcgcctggc gagcccagcg cgtcctcggg cacctgcggc ccgcgataca
     1261 gcaacctgac caaagccgcc cctgcagccg gctccgggcc ggtctgcaac ggcgtcccag
     1321 agcccaccgg gctggacgca gcttgcacca aattggaatc tttgcagaga cttttcgaac
     1381 cgaccacccc ggctccccct ctgcggcccc ctgactcccc ttcccgtgcc ccggagttcc
     1441 cctccgccaa aaaaaacttg ctcaaaggcc actttcggaa cttcactctc tccttttgcg
     1501 acacctacac agtctgggac ttgctgcttg gcatggaccg ccccgacagc ctggactgca
     1561 gtttggacac cctgctgggg gatctactgg ccgtagtggc cagcccgggc tctgggacct
     1621 gggaggcatg tagcaattgc atagaggcat accagcgact ggatcgacat gctcaggaaa
     1681 aatatgatga gttcgacctc gtgctgcata aatacttaca ggcagaagag tactctatcc
     1741 ggtcctgcac gaaaggctgc aaggctgtct acaaggcctg gctgtgttca gaatacttca
     1801 gtgtgaccca gcaggaatgc cagaactggg tgccctgcaa gcaatactgc ctggaggtgc
     1861 agacccggtg cccctttatc ctccctgaca atgaagaaat ggtgtatgga ggcctccctg
     1921 gctttatctg tacagggttg atggatactt caccaaagcg gccggaaacc aagtgctgtg
     1981 atgtgcagtg ggtctcctgt gagtcggaga agaagaagtt caaggactct gagcccccta
     2041 aaacccacca ccagcaattc caccactcct attttcacca ctaccaccat cagtaccacc
     2101 actaccatcc ccgccatgaa cccccaagcc gagtcagcaa caagccctcc ctgctgccgg
     2161 tctctggggg ctcccgcctc agtcccagca ggatccggct ctgtgtcctt gttcttatac
     2221 tcctccatac cgtagtgtcc ttctccagca gccagagtgg tgggggactg ggactggaga
     2281 cactgcctgc cctagaggag gggctgacac aggaagagtg accacaggga gggaggacaa
     2341 acctccacca catactgaca tcagctccag cccagctcca ggctggggga aggaagcatc
     2401 tcccacagga ggtgtaggat caggtggggg tggggagaaa tgggggacca gatatcgtcc
     2461 ccaatctacc cctgccctaa aagcagctcc aacaaaatgg ccagagggcc cccaaggagc
     2521 tgtaaaactc acccaggaga aaaaggtagg agcagcaggt gtcccctccc aagccccacc
     2581 tttggggctt agttctaaaa agggggaggg gctggagttg cccactcctg ccaagagccc
     2641 tgaccccagg gaaggaggct gcttacccag cctcagccct gcagggaatg ttggggggca
     2701 cagaggggag tagttctccc ccctccacat tccttccgtt gccaagatcc ttaattccct
     2761 cctgcccata tccctacagg tgacggcaga cagtgtggtt gccctcctgc cagcgttgtc
     2821 agcaccctga gtgtggggcg ggcacaggat gaggcacaca gtgtgacagc taggaaggtg
     2881 ccctagttag gctgccccca ccaccctagg caatgaggga ttggaactgg atatggaatg
     2941 agtggtagaa gagaagaaag atagggaagg ggagaagaaa ggggagaggt ggcctgaaga
     3001 gatggctaca ctaatgatac ctggcttttg ggaggtgggt gattagtgtt gaggcagata
     3061 gattcaagag tggcccccca aataagaagg aaatgcataa agagatccct gggaaggagc
     3121 tcaggagcca acacccagaa agttgagggc acatggttgg actgccgctg tctggagggc
     3181 catatcttac agaaggtgca cacactccct agggctgctc tgccctggaa atcttggcct
     3241 tggggccaca gacctttcat ttccaatctc cacagggagt agggacttga gtccaagtgc
     3301 gtcaggcctg gcctgggtcc ctacactccc tcatcttgtc ctagcccagg cctccatgaa
     3361 ggagagctgg tggtgttacc ccagagctct ccagagatga gcctccccta ccccatcctg
     3421 tgtccatccc cagcctacca aagagtattc atcccttccc atccctgacc ttgtggccta
     3481 ttgtcccact gagggacagc tagactcctc ctcacccttt agcaggtccc tttctctagc
     3541 caccccttgc ccttgctgga caaagttcag aggctggcaa gaggactctg actggagata
     3601 aagtgctgct gctaaccctt gcccgaggaa ctcatttagt caggctaaag ggatgagtga
     3661 gagatgaggc ttgggagcct ttggccttgc ttgcactgac ctgctggaag aaaaggaagg
     3721 acacattgcc tgggtatcta aaagccaatg caagctgaca agaacaggag cccgattctt
     3781 tgtgggatag gccaatggct ttcagagacc aaaaggatgc atacaggagg acagtcctgg
     3841 agcagcatta cagagaaaca ggaggggagg ggaaggagga gctgcaccct gccagctttg
     3901 tgatggatgg acgccctccc tagcagacaa gggttccttc attcaagggc cactgttgga
     3961 tcccaaatca gcttcttgag cctacggagc ccgtttctct gccagtttac tcatatctca
     4021 cagcctgtcc tctgcctgga ccctgtgtcc tccatctttt ggccctcagc acttcgggcc
     4081 cggccacata ccccatccct agagtgctct tttcagctgg ggagggtacg aggtgctgga
     4141 tccttcccag atgtgcttct gtgtaagtga aaggcagggg catgggctcc agagagatcc
     4201 cagtactgcc ttctgacgcc tgcatcctca ggaggggata aaggactggg aagcaaaggg
     4261 ggacaatatg gtcccaggga atggaccctt ggagactccc atcctctctt ccccctcacc
     4321 aagtgcccag gagacccctg gctcagacca gcccaaggcc ttgcccagtg gcaggggaaa
     4381 ggggcaccac actccacctc acagtcattt gactgtcccc atcgacccaa ctccctactc
     4441 ctccacctcc ccagctgccc ctgccctccg tcacaggcag cagagctggg cggctttctt
     4501 atgccatttt ctacactgtg cttcatgagt aggcctttct tgcactagtt cctatgactg
     4561 agtctccaag ctggtcccct agtagtctcc catcccttcc tcctttcccc ggctatggtt
     4621 cagttgtctc tgccttcctc tttcccagcc tccgtgtttc agtgagagtg tctgtacgtg
     4681 tactgctttc tattttgttg cactgtgggg cagagacatc tctgctcttg tttaacccct
     4741 taaagaaata aatggtaaga cttga
//
