LOCUS       XM_006512128            2287 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus myosin VIIA and Rab interacting protein
            (Myrip), transcript variant X3, mRNA.
ACCESSION   XM_006512128
VERSION     XM_006512128.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006512128.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..2287
                     /gene="Myrip"
                     /gene_synonym="A230081N12Rik; Slac2-c; Slac2c"
                     /note="myosin VIIA and Rab interacting protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 28 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:245049"
                     /db_xref="MGI:MGI:2384407"
     CDS             305..2209
                     /gene="Myrip"
                     /gene_synonym="A230081N12Rik; Slac2-c; Slac2c"
                     /codon_start=1
                     /product="rab effector MyRIP isoform X3"
                     /protein_id="XP_006512191.1"
                     /db_xref="GeneID:245049"
                     /db_xref="MGI:MGI:2384407"
                     /translation="MGRKLDLSGLTDDETEHVLQVVQRDFNLRKKEEDRLSEMKQRLA
                     EENSKCSILSKHQKFVERCCMRCCSPFTFLVNARRRCGECKFSVCKSCCSYQKHEKLW
                     VCCVCQQARLLRTQSLEWFYNNVKSRFKRFGSAKVLKNLYRKHRLESGACFDILGGGL
                     FEPNLENEGSISGSDSTFYRQSEGHSMMDTLAVALRVAEEAIEEAISKAESHGDSLDK
                     QNEASYLRDHKQELTEELAGTILQRIIRKQKDKAELRAEEEEPEWPRSQSGSVKARGE
                     GTTAPPGRHKARATFRRSQSAFSFTMEDALKSGSAEAAPRSPKDRAQRLLEEAALPSW
                     RSMDGLDGTNLAPLLQSPDGNWMTLKDGSRQPPTRLLTKPKSGTFQALEVASSVTSAY
                     DEIGSDSEEDFDYSEALSKLCPPSQSRLKQPQPQPTQAQSSGQGPLATSPSNPEAMCS
                     DSETSSTSSSREAGCRAKLSWLQRKAPKNPAVEKMPLQGELDVNFNPQAAGGETSDSS
                     DPEETLRTAERRARRWRRARVGPEESNRGLPSPGAHPRALHTAQVSDNVSETDISNET
                     QNSRSSTDSVEEKLRNRLYELAMKMSEKETSSGEDQESESKAEPKNQKGSLSSEENNQ
                     GVQEELKKKS"
ORIGIN      
        1 tggcggcggc cgcagtggct tgggctggcg ctggctggga gcctggagcg ggcgcctccc
       61 tcgcgccgcg cgccctcgtc ctgcccgcgc tgcccggctc ccgctgtgac tgcggcccca
      121 gctcgggcgc accggcgatc tgcagcctcg ggatcgcgcg ctggacgcag gctgcggcag
      181 gtgacccggg gccatccgag gcgcggtggc tgtgagcctg gccgccatcc atgagctccg
      241 ccgcggaccc actccaggcc ggccaccccg gatctagttc agttgtccgt gtttaactct
      301 gatcatgggg aggaagctgg acctgtcggg tctgaccgac gatgagaccg agcatgttct
      361 ccaagtggtg cagagagact tcaatcttcg caaaaaggag gaggaccggc taagtgagat
      421 gaagcagagg ctggccgagg agaacagcaa gtgcagcatc ctctcgaagc accagaagtt
      481 cgtggagcgc tgctgcatgc ggtgctgctc gcccttcacc ttcctggtca acgccaggcg
      541 ccgctgcggg gaatgcaagt tcagcgtctg caagagctgc tgctcctacc agaagcacga
      601 gaagctatgg gtttgctgtg tctgccagca agccaggctt ctgaggacac agtctctgga
      661 gtggttctac aacaatgtga aaagccgctt caagcgcttt ggcagtgcca aggtcctgaa
      721 gaacctgtac agaaaacacc gtctggagag cggtgcctgc ttcgacatcc taggaggagg
      781 attgtttgaa ccaaacctgg agaatgaagg gagcatttca ggaagtgact ccacgttcta
      841 caggcagtca gaagggcaca gcatgatgga caccttggct gtggccctac gagtggcaga
      901 agaggccatc gaggaggcca tttccaaagc agaatcccat ggggacagcc tggacaaaca
      961 gaacgaggcc agctacctgc gggaccacaa gcaagagcta actgaggagc tggccggcac
     1021 catcctgcag aggattataa gaaagcagaa ggataaagct gagctgcgag ctgaggagga
     1081 ggagccagag tggccacggt cccagagtgg cagtgtgaag gccaggggtg aggggaccac
     1141 ggcccctcca ggacgacaca aagcacgtgc caccttcagg cggtcccagt ctgcattctc
     1201 cttcactatg gaagatgctc tgaagtctgg ttcagcagag gctgcaccaa ggtcacccaa
     1261 ggaccgcgcc cagcgtctgc tggaggaggc cgctctgccc agctggagga gcatggatgg
     1321 actggacgga acaaacctgg ccccactttt gcagagcccc gatgggaact ggatgacctt
     1381 gaaggacggt agtagacagc ccccaacccg cctgctgacc aaaccgaaga gtgggacctt
     1441 tcaggccctg gaggtggcgt ccagtgtgac gtctgcctat gatgagatcg gttccgacag
     1501 tgaggaagac tttgattaca gcgaagcctt gagtaagctg tgcccaccgt cccagagcag
     1561 gctcaagcaa ccccagcctc agcctacaca ggcccagagt tctggccaag gtcccttagc
     1621 cacctctccc tcaaaccctg aggccatgtg ctcggattca gagacatctt ccaccagctc
     1681 atctcgggaa gctggctgcc gggctaagct gtcctggctg cagaggaagg cccccaagaa
     1741 ccccgcagtg gagaagatgc ccctccaggg agaactggac gtcaatttca accctcaggc
     1801 agccggtgga gagacttccg acagtagcga tccagaggag accctccgca ctgcagagcg
     1861 ccgggccagg aggtggagaa gggcacgagt gggccccgag gagtcaaaca ggggtctgcc
     1921 ttcacctggt gcccatccac gggcactgca cacggctcag gtgtcagaca acgtgtcaga
     1981 gactgacatc agcaacgaga ctcagaattc ccggtccagc acggactcag tagaggagaa
     2041 gctgagaaat agactgtatg agttagccat gaaaatgagc gaaaaggaga cttcttctgg
     2101 ggaggaccag gagtccgagt ccaaggcgga acctaagaac cagaagggaa gtctctcttc
     2161 tgaggagaac aaccagggtg tccaggagga gctgaagaag aagtcctgaa ggtcatcaat
     2221 gctaccgagg agttgatcgc agagtctgca gggccctggg agatcccccc agtctccact
     2281 gacagag
//
