LOCUS       NM_028617               1077 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus multivesicular body subunit 12A (Mvb12a), mRNA.
ACCESSION   NM_028617
VERSION     NM_028617.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC020119.1.
            
            On Jan 15, 2003 this sequence version replaced NM_028617.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC020119.1, AK003644.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="CZECHII"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 34.43 cM"
     gene            1..1077
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /note="multivesicular body subunit 12A"
                     /db_xref="GeneID:73711"
                     /db_xref="MGI:MGI:1920961"
     exon            1..128
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..860
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /note="ESCRT-I complex subunit MVB12A; family with
                     sequence similarity 125, member A"
                     /codon_start=1
                     /product="multivesicular body subunit 12A"
                     /protein_id="NP_082893.1"
                     /db_xref="CCDS:CCDS22398.1"
                     /db_xref="GeneID:73711"
                     /db_xref="MGI:MGI:1920961"
                     /translation="MDPGTDSAPLAGLVWSSASAPPPPGFSAITCTVEGGTASFGRGF
                     AQKAGYFLCLSTLGIPENPQDNVVVDMQIVMDKGPLPSGFSAVNDPQDIKASVSKKKR
                     MCVKLMPLGTADVVVSDVKLSGKTKTVPGYLRVGDIGGFAIWCKKSKAPRPVPKPRTL
                     SQDMRGLSLDPPKEPSKGSHPERTLSRLGSRASTLRRTDSIYEASSLYGISAMDGVPF
                     TLHPRFEGKSCGPLNLSAFGDLTIKSLADIEKEYNYGFVVEKTAAARLPPSVS"
     exon            129..227
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            228..324
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            325..451
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            452..571
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            572..678
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            679..740
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            741..797
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     exon            798..1062
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1040..1045
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /note="hexamer: AGTAAA"
     polyA_site      1062
                     /gene="Mvb12a"
                     /gene_synonym="1110012M11Rik; Fam125a"
                     /note="major polyA site"
ORIGIN      
        1 ggtccctccg agggctgtag ctgccttctg agctcccagg aaggatggat cccgggacgg
       61 actcggcgcc gcttgctggc ttggtttggt cgtcggcctc ggcgccgccg ccgccgggtt
      121 tcagcgcgat cacctgcacc gtggagggcg ggacggccag cttcggccga ggcttcgcgc
      181 agaaagccgg ctacttcctg tgcctgagca cgctgggcat cccggagaac cctcaggaca
      241 atgtggtagt ggacatgcag atcgtgatgg acaagggccc actgccgtca ggcttctctg
      301 cagtcaacga ccctcaggat atcaaggcct ctgtgtccaa gaagaaacgc atgtgtgtga
      361 agctgatgcc cctggggaca gctgacgtgg ttgtgagtga cgtgaagctg agtgggaaga
      421 ctaagaccgt gcctggatac ctgcgtgtgg gggacattgg tggctttgcc atctggtgca
      481 agaaatccaa agccccaagg ccggtgccca agccccgcac gctcagccag gacatgcgag
      541 gcctctccct ggacccaccc aaagagccca gcaaaggaag ccacccagag cggaccctgt
      601 ccaggctggg ctctcgggcc tccactctac ggaggaccga ctccatctat gaggcatcca
      661 gtctctatgg catatcagcc atggacggag tcccctttac cctgcaccca agatttgagg
      721 gcaagagctg tgggcccttg aacttgtctg cttttgggga cctgacgatc aaatcactgg
      781 cagacattga gaaggagtat aactatggct tcgtggtgga gaagactgca gctgcacgcc
      841 tgcctcccag cgtctcatag accagcccca ggtgccacct ggtcgcctcc tgccttgcag
      901 atactgctga ttgacaccca gcctctctgt ccaactgctt gcacaaaggg tctcttgcct
      961 ggtggtgcag gggcggcctg ggcagagcag tggccttctc tcacagaagt ctgtgtctag
     1021 aggccacata tgcaccagca gtaaacgcta cctgggaccc acaaaaaaaa aaaaaaa
//
