LOCUS       NM_001081285             883 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus major urinary protein 6 (Mup6), mRNA.
ACCESSION   NM_001081285 XM_885194
VERSION     NM_001081285.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Charkoftaki G, Wang Y, McAndrews M, Bruford EA, Thompson DC,
            Vasiliou V and Nebert DW.
  TITLE     Update on the human and mouse lipocalin (LCN) gene family,
            including evidence the mouse Mup cluster is result of an
            'evolutionary bloom'
  JOURNAL   Hum Genomics 13 (1), 11 (2019)
   PUBMED   30782214
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Logan DW, Marton TF and Stowers L.
  TITLE     Species specificity in major urinary proteins by parallel evolution
  JOURNAL   PLoS One 3 (9), e3280 (2008)
   PUBMED   18815613
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 883)
  AUTHORS   Chamero P, Marton TF, Logan DW, Flanagan K, Cruz JR, Saghatelian A,
            Cravatt BF and Stowers L.
  TITLE     Identification of protein pheromones that promote aggressive
            behaviour
  JOURNAL   Nature 450 (7171), 899-902 (2007)
   PUBMED   18064011
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL929376.7.
            
            On Jun 17, 2019 this sequence version replaced NM_001081285.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               AL929376.7         13717-13877
            162-295             AL929376.7         14214-14347
            296-369             AL929376.7         15050-15123
            370-480             AL929376.7         15708-15818
            481-582             AL929376.7         16158-16259
            583-628             AL929376.7         16425-16470
            629-883             AL929376.7         17256-17510
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 32.82 cM"
     gene            1..883
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /note="major urinary protein 6"
                     /db_xref="GeneID:620807"
                     /db_xref="MGI:MGI:3650962"
     exon            1..161
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..608
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /note="major urinary protein 2"
                     /codon_start=1
                     /product="major urinary protein (Mup)-like precursor"
                     /protein_id="NP_001074754.1"
                     /db_xref="CCDS:CCDS38773.1"
                     /db_xref="GeneID:620807"
                     /db_xref="MGI:MGI:3650962"
                     /translation="MKLLLLCLGLILVCVHAEEASSMGRNFNVEKINGEWYTIILASD
                     KRAKIEEHGIMRLFVEHIHVLENSLGFKFHTVIDEECSEIFLVADKTEKAGEYSVTYD
                     GFKKFTVLKTDYDNYIMFHLINEMNGETFQLMSLYGREPDLNSDIKEKFVKLCEEHGI
                     IRENIIDFTKTNRCLQARE"
     exon            162..295
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     exon            296..369
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     exon            370..480
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     exon            481..582
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     exon            583..628
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
     exon            629..883
                     /gene="Mup6"
                     /gene_synonym="620807; Gm12544; Mup2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggagtgta ggcaccatca ccagaaagtc gtggtcctga cagacagaca attctactcc
       61 ctaccaaaat gaagctgctg ctgctgtgtt tgggactgat cctagtctgt gtccatgcag
      121 aagaagctag ttctatggga aggaacttta atgtagaaaa gattaatggg gagtggtata
      181 ctattatcct ggcctctgac aaaagagcaa agatagaaga acatggcatc atgagacttt
      241 ttgtggagca cattcatgtc ttggagaatt ccttaggttt taaattccat actgttatag
      301 atgaagagtg ctccgaaata tttttggttg ctgacaaaac agaaaaggct ggtgaatatt
      361 ctgtgacata tgatggattc aaaaaattta cagtacttaa gacagactat gataattata
      421 ttatgtttca tctcattaat gaaatgaatg gggaaacctt ccagctgatg tcgctctatg
      481 gccgagaacc agatttgaat tcagatatca aagaaaagtt tgtaaaactt tgtgaggagc
      541 atggaatcat tagagagaat atcattgact tcaccaaaac caatcgctgc ctccaggccc
      601 gagaatgaag aatggcctga gcctccagtg tttagtggag aattctcacc aggactccag
      661 aatcatccct tactatccat acagcatcct gtgacaagtt tctgagatct gcctttcatc
      721 gtgtctcaca gagaagtgca atcctggttt ctccagcatg ttacctagga caactcatca
      781 agaatcaaag actttcttta aatttctctt tggcacaccc atgactattc tccttgaatt
      841 tcttcttttt cctgttcaat aaatgattac acttgcattt aaa
//
