LOCUS       NM_001347134             883 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus major urinary protein 13 (Mup13), mRNA.
ACCESSION   NM_001347134 NM_001134644 XM_006537485
VERSION     NM_001347134.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Charkoftaki G, Wang Y, McAndrews M, Bruford EA, Thompson DC,
            Vasiliou V and Nebert DW.
  TITLE     Update on the human and mouse lipocalin (LCN) gene family,
            including evidence the mouse Mup cluster is result of an
            'evolutionary bloom'
  JOURNAL   Hum Genomics 13 (1), 11 (2019)
   PUBMED   30782214
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 883)
  AUTHORS   Logan DW, Marton TF and Stowers L.
  TITLE     Species specificity in major urinary proteins by parallel evolution
  JOURNAL   PLoS One 3 (9), e3280 (2008)
   PUBMED   18815613
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 883)
  AUTHORS   Chamero P, Marton TF, Logan DW, Flanagan K, Cruz JR, Saghatelian A,
            Cravatt BF and Stowers L.
  TITLE     Identification of protein pheromones that promote aggressive
            behaviour
  JOURNAL   Nature 450 (7171), 899-902 (2007)
   PUBMED   18064011
REFERENCE   4  (bases 1 to 883)
  AUTHORS   al-Shawi R, Ghazal P, Clark AJ and Bishop JO.
  TITLE     Intraspecific evolution of a gene family coding for urinary
            proteins
  JOURNAL   J Mol Evol 29 (4), 302-313 (1989)
   PUBMED   2514272
REFERENCE   5  (bases 1 to 883)
  AUTHORS   Bishop,J.O., Selman,G.G., Hickman,J., Black,L., Saunders,R.D. and
            Clark,A.J.
  TITLE     The 45-kb unit of major urinary protein gene organization is a
            gigantic imperfect palindrome
  JOURNAL   Mol Cell Biol 5 (7), 1591-1600 (1985)
   PUBMED   4022008
REFERENCE   6  (bases 1 to 883)
  AUTHORS   Sampsell,B.M. and Held,W.A.
  TITLE     Variation in the major urinary protein multigene family in
            wild-derived mice
  JOURNAL   Genetics 109 (3), 549-568 (1985)
   PUBMED   3979814
REFERENCE   7  (bases 1 to 883)
  AUTHORS   Shaw,P.H., Held,W.A. and Hastie,N.D.
  TITLE     The gene family for major urinary proteins: expression in several
            secretory tissues of the mouse
  JOURNAL   Cell 32 (3), 755-761 (1983)
   PUBMED   6831559
REFERENCE   8  (bases 1 to 883)
  AUTHORS   Krauter,K., Leinwand,L., D'Eustachio,P., Ruddle,F. and Darnell,J.E.
            Jr.
  TITLE     Structural genes of the mouse major urinary protein are on
            chromosome 4
  JOURNAL   J Cell Biol 94 (2), 414-417 (1982)
   PUBMED   7107707
REFERENCE   9  (bases 1 to 883)
  AUTHORS   Bennett,K.L., Lalley,P.A., Barth,R.K. and Hastie,N.D.
  TITLE     Mapping the structural genes coding for the major urinary proteins
            in the mouse: combined use of recombinant inbred strains and
            somatic cell hybrids
  JOURNAL   Proc Natl Acad Sci U S A 79 (4), 1220-1224 (1982)
   PUBMED   6951169
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CR550303.18.
            
            On or before Apr 17, 2020 this sequence version replaced
            NM_001134644.1, XM_006537485.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA456992.1, CA479341.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-163               CR550303.18        78454-78616         c
            164-297             CR550303.18        77982-78115         c
            298-371             CR550303.18        77140-77213         c
            372-482             CR550303.18        76394-76504         c
            483-584             CR550303.18        75949-76050         c
            585-630             CR550303.18        75740-75785         c
            631-883             CR550303.18        74697-74949         c
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 32.87 cM"
     gene            1..883
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /note="major urinary protein 13"
                     /db_xref="GeneID:100039089"
                     /db_xref="MGI:MGI:3702003"
     exon            1..163
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     CDS             68..610
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /note="major urinary protein 11"
                     /codon_start=1
                     /product="major urinary protein 13 precursor"
                     /protein_id="NP_001334063.1"
                     /db_xref="CCDS:CCDS84743.1"
                     /db_xref="GeneID:100039089"
                     /db_xref="MGI:MGI:3702003"
                     /translation="MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILAS
                     DKREKIEEHGNFRLFLEQIHVLENSLVLKVHTVRDEECSELSMVADKTEKAGKYSVTY
                     DGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHG
                     ILRENIIDLSNANRCLQARE"
     exon            164..297
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     exon            298..371
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     exon            372..482
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     exon            483..584
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     exon            585..630
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
     exon            631..883
                     /gene="Mup13"
                     /gene_synonym="Gm13513; Gm2083; Mup11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggagtgtag ccacgatcac aagaaagacg tggtcctgac agacagacaa tcctattccc
       61 taccaaaatg aagatgctgt tgctgctgtg tttgggactg accctagtct gtgtccatgc
      121 agaagaagct agttctacgg gaaggaactt taatgtagaa aagattaatg gggaatggca
      181 tactattatc ctggcctctg acaaaagaga aaagatagaa gaacatggca actttagact
      241 ttttctggag caaatccatg tcttggagaa ttccttagtt cttaaagtcc atactgtaag
      301 agatgaagag tgctcggaat tatctatggt tgctgacaaa acagaaaagg ctggtaaata
      361 ttctgtgacg tatgatggat tcaatacatt tactatacct aagacagact atgataactt
      421 tcttatggct catctcatta acgaaaagga tggggaaacc ttccagctga tggggctcta
      481 tggccgagaa ccagatttga gttcagacat caaggaaagg tttgcacaac tatgtgagga
      541 gcatggaatc cttagagaaa atatcattga cctatccaat gccaatcgct gcctccaggc
      601 ccgagaatga agaatggcct gagcctccag tgttgagtgg agacttctca ccaggactcc
      661 accatcatcc cttcctatcc atacagcatc cccagtataa attctgtgat ctgcattcca
      721 tcctgtctca ctgagaagtc caattccagt ctatccacat gttacctagg atacctcatc
      781 aagaatcaaa gacttcttta aatttctctt tgatataccc atgacaattt ttcatgaatt
      841 tcttcctctt cctgttcaat aaatgattac ccttgcactt aaa
//
