LOCUS       NM_001164526             925 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus major urinary protein 11 (Mup11), mRNA.
ACCESSION   NM_001164526 XM_001472078
VERSION     NM_001164526.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Charkoftaki,G., Wang,Y., McAndrews,M., Bruford,E.A., Thompson,D.C.,
            Vasiliou,V. and Nebert,D.W.
  TITLE     Update on the human and mouse lipocalin (LCN) gene family,
            including evidence the mouse Mup cluster is result of an
            'evolutionary bloom'
  JOURNAL   Hum Genomics 13 (1), 11 (2019)
   PUBMED   30782214
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Phelan,M.M., McLean,L., Armstrong,S.D., Hurst,J.L., Beynon,R.J. and
            Lian,L.Y.
  TITLE     The structure, stability and pheromone binding of the male mouse
            protein sex pheromone darcin
  JOURNAL   PLoS One 9 (10), e108415 (2014)
   PUBMED   25279835
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 925)
  AUTHORS   Shaw,P.H., Held,W.A. and Hastie,N.D.
  TITLE     The gene family for major urinary proteins: expression in several
            secretory tissues of the mouse
  JOURNAL   Cell 32 (3), 755-761 (1983)
   PUBMED   6831559
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX950196.7, AK013972.1 and AI118205.1.
            
            On Sep 9, 2009 this sequence version replaced XM_001472078.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK013972.1, CA462970.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849386 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-189               BX950196.7         24731-24919
            190-785             AK013972.1         167-762
            786-786             BX950196.7         28532-28532
            787-911             AK013972.1         764-888
            912-925             AI118205.1         1-14                c
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 32.86 cM"
     gene            1..925
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /note="major urinary protein 11"
                     /db_xref="GeneID:100039028"
                     /db_xref="MGI:MGI:3709617"
     exon            1..194
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..641
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /note="Major urinary protein 18"
                     /codon_start=1
                     /product="major urinary protein 11 precursor"
                     /protein_id="NP_001157998.1"
                     /db_xref="CCDS:CCDS51190.1"
                     /db_xref="GeneID:100039028"
                     /db_xref="MGI:MGI:3709617"
                     /translation="MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILA
                     SDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVT
                     YDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEH
                     GILRENIIDLSNANRCLQARE"
     exon            195..328
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     exon            329..402
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     exon            403..513
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     exon            514..615
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     exon            616..661
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     exon            662..914
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /inference="alignment:Splign:2.1.0"
     regulatory      889..894
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /note="hexamer: AATAAA"
     polyA_site      908
                     /gene="Mup11"
                     /gene_synonym="Gm12549; Mup16; Mup18"
                     /note="major polyA site"
ORIGIN      
        1 tataaggaca agcaaagggg ctggggagtg gagtgtagcc acgatcacaa gaaagacgtg
       61 gtcctgacag acagacaatc ctattcccta ccaaaatgaa gatgctgctg ctgctgctgt
      121 gtttgggact gaccctagtc tgtgtccatg cagaagaagc tagttctacg ggaaggaact
      181 ttaatgtaga aaagattaat ggggaatggc atactattat cctggcctct gacaaaagag
      241 aaaagataga agataatggc aactttagac tttttctgga gcaaatccat gtcttggaga
      301 attccttagt tcttaaattc catactgtaa gagatgaaga gtgctcggaa ttatctatgg
      361 ttgctgacaa aacagaaaag gctggtgaat attctgtgac gtatgatgga ttcaatacat
      421 ttactatacc taagacagac tatgataact ttcttatggc tcatctcatt aacgaaaagg
      481 atggggaaac cttccagctg atggggctct atggccgaga accagatttg agttcagaca
      541 tcaaggaaag gtttgcacaa ctatgtgagg agcatggaat ccttagagaa aatatcattg
      601 acctatccaa tgccaatcgc tgcctccagg cccgagaatg aagaatggcc tgagcctcca
      661 gtgttgagtg gagacttctc accaggactc caccatcatc ccttcctatc catacagcat
      721 ccccagtata aattctgtga tctgcattcc atcctgtctc actgagaagt ccaattccag
      781 tctatctaca ttttacctag gatacctcat caagaatcaa agacttcttt aaatttctct
      841 ttgatacacc cttgacaatt tttcatgaaa ttcttcctct tcctgttcaa taaatgatta
      901 cccttgcact taaaaaaaaa aaaaa
//
