LOCUS       XM_011250147             823 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus major urinary protein, pseudogene 16
            (Mup-ps16), transcript variant X1, mRNA.
ACCESSION   XM_011250147
VERSION     XM_011250147.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011250147.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..823
                     /gene="Mup-ps16"
                     /note="major urinary protein, pseudogene 16; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:667278"
                     /db_xref="MGI:MGI:3645603"
     CDS             84..773
                     /gene="Mup-ps16"
                     /codon_start=1
                     /product="major urinary protein 4 isoform X1"
                     /protein_id="XP_011248449.1"
                     /db_xref="GeneID:667278"
                     /db_xref="MGI:MGI:3645603"
                     /translation="MLCFNFASALYGHNDFTMNGEWLNSQRRNKQCWRVINKSDWQVV
                     AKKVHMCFFKIWRSRCGPRMNEINGEWYTIILASDKREKIEEHGSMRLFVEHIHVLEN
                     SLGFKLHTVDDGFNTFTILKTEYDNYIMFHLINEMNGETFQLMLLYDLEPDLRSDIKE
                     EFAKLFEEHGIVRENSIDLSNAMLSGDFSPGLQHHPFLSIQHPVTSSVICFPSCLTEN
                     CNPCLSSMLLG"
ORIGIN      
        1 tactttcgag aacattggac ttcacctgac aagacataat aaaataaaaa taaaagactt
       61 caagaaggag gcaagtacgt gatatgcttt gtttcaactt tgcttcagct ttatatggtc
      121 acaatgattt taccatgaat ggggaatggt taaacagtca aaggaggaat aaacagtgtt
      181 ggagagttat aaacaagtca gactggcagg tagtagcaaa gaaagtgcac atgtgtttct
      241 ttaaaatatg gaggagtcgg tgtggaccga gaatgaatga gattaatggg gaatggtaca
      301 ctattatcct ggcttctgac aaaagagaaa agatagaaga acatggcagc atgagacttt
      361 ttgtggagca cattcatgtc ttggagaatt ccttaggttt taaactccat actgtagatg
      421 atggattcaa tacatttact atactgaaga cagaatatga taattatatt atgtttcatc
      481 tcattaatga aatgaatggg gaaaccttcc agctgatgtt gctttatgac ctagaaccgg
      541 atttgaggtc agacatcaag gaagaatttg caaaactatt tgaggagcat ggaatcgtta
      601 gagaaaatag cattgaccta tctaatgcca tgttgagtgg agacttctca ccaggactcc
      661 agcatcatcc cttcctatcc atacagcatc ctgtgacaag ttctgtgatc tgttttccat
      721 catgtctcac agagaattgc aatccctgtc tctccagcat gttactagga taactcatca
      781 agaatcaaag actttcatta aatttcattt gatacaccca tga
//
