LOCUS       XM_006521815            2751 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus mucin 13, epithelial transmembrane (Muc13),
            transcript variant X1, mRNA.
ACCESSION   XM_006521815
VERSION     XM_006521815.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006521815.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2751
                     /gene="Muc13"
                     /gene_synonym="114/A10; 14/A10; Lrrp; Ly64; NJ-1"
                     /note="mucin 13, epithelial transmembrane; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 ESTs, 26 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:17063"
                     /db_xref="MGI:MGI:103190"
     CDS             56..1696
                     /gene="Muc13"
                     /gene_synonym="114/A10; 14/A10; Lrrp; Ly64; NJ-1"
                     /codon_start=1
                     /product="mucin-13 isoform X1"
                     /protein_id="XP_006521878.1"
                     /db_xref="GeneID:17063"
                     /db_xref="MGI:MGI:103190"
                     /translation="MKGFLLLSLSLLLVTVGSSSQASSTTSSSGGTSPPTTVQSQSPG
                     SSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQ
                     ASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTT
                     TSSSGGASPPTTVQSQSPGSSSQPGPTQPSGGASSSTVPSGGSTGPSDLCNPNPCKGT
                     ASCVKLHSKHFCLCLEGYYYNSSLSSCVKGTTFPGDISMSVSETANLEDENSVGYQEL
                     YNSVTDFFETTFNKTDYGQTVIIKVSTAPSRSARSAMRDATKDVSVSVVNIFGADTKE
                     TEKSVSSAIETAIKTSGNVKDYVSINLCDHYGCVGNDSSKCQDILQCTCKPGLDRLNP
                     QVPFCVAVTCSQPCNAEEKEQCLKMDNGVMDCVCMPGYQRANGNRKCEECPFGYSGMN
                     CKDQFQLILTIVGTIAGALILILLIAFIVSARSKNKKKDGEEQRLIEDDFHNLRLRQT
                     GFSNLGADNSIFPKVRTGVPSQTPNPYANQRSMPRPDY"
ORIGIN      
        1 gcagcgaagg agaggacaca tttcctcctt ggattatcaa gcaagagcag ctaccatgaa
       61 aggcttcctg cttctctctc tcagtctcct tttggtgacc gtgggtagtt catctcaggc
      121 ctctagtaca acatcgtctt ctggtggcac cagtcctccc accacagtac aaagtcaatc
      181 tccaggtagt tcatctcagg cctctactac aacatcgtct tctggtggcg ccagtcctcc
      241 caccacggta cagagtcaat ctccaggtag ttcatctcag gcctctacta caacatcgtc
      301 ttctggtggc gccagtcctc ccaccacggt acagagtcaa tctccaggta gttcatctca
      361 ggcctctact acaacatcgt cttctggtgg cgccagtcct cccaccacgg tacagagtca
      421 atctccaggt agttcatctc aggcctctac tacaacatcg tcttctggtg gcgccagtcc
      481 tcccaccacg gtacagagtc aatctccagg tagttcatct caggcctcta ctacaacatc
      541 gtcttctggt ggcgccagtc ctcccaccac ggtacagagt caatctccag gtagttcatc
      601 tcagcccgga ccaactcagc cttctggtgg tgccagctct tccaccgtgc ctagcggtgg
      661 aagcacaggt cccagtgatc tctgcaaccc taacccctgt aaaggaactg cttcttgtgt
      721 taagctgcat agcaaacact tctgcttgtg tttagaaggc tattactaca actcgtctct
      781 gtcgtcatgt gtgaaaggaa cgacattccc tggggacatt agcatgagtg tgtctgaaac
      841 agccaacttg gaagatgaaa actctgtggg ctatcaagag ttgtacaaca gtgttaccga
      901 tttttttgaa acaacattta ataagactga ctatggacag actgtaatta ttaaagtgag
      961 cacagcccct tcacggtcag caagatctgc aatgcgtgat gctacaaagg acgtcagtgt
     1021 atccgtagta aatatatttg gagcagacac aaaagaaact gaaaagagtg tatcttctgc
     1081 aatcgaaact gcaattaaga ctagtggcaa tgtgaaagac tatgtcagta taaatttgtg
     1141 tgatcattat ggttgtgtag ggaatgacag cagtaaatgc caggacattt tacaatgcac
     1201 gtgcaaacct gggctggaca ggctgaaccc acaggttcct ttttgtgttg ctgtaacgtg
     1261 ctctcagccc tgcaatgcag aggagaagga gcagtgctta aagatggata acggagtaat
     1321 ggattgtgtg tgcatgccgg gctaccagag ggcaaacggg aacaggaagt gtgaagagtg
     1381 tccatttggc tacagcggga tgaattgcaa agaccaattt cagctgatcc tcaccatcgt
     1441 gggcaccatt gctggagccc tcatcctcat cttgctgatt gcttttatcg tctctgcgag
     1501 gtcaaagaac aaaaagaagg atggagaaga gcagaggctg attgaggatg acttccataa
     1561 cctacgactg aggcagaccg gcttctccaa cttaggagcg gacaacagca tcttccccaa
     1621 agtcagaaca ggggtcccga gtcagacccc taatccctac gcaaaccagc gaagcatgcc
     1681 tcgccctgac tactagaatg ataagaattt ggaaccctcc ctagcccagc ccacccaagc
     1741 tacggtctta aggacaagga gaaatgggca gagacaaagt ttgacctcca gcattcctct
     1801 gcgtggtttg ccaacccctc tgggtgtgga cctgtgtgaa gaccgaagct tgccgaagac
     1861 acacctatca aattaaatgc gcatagaccc tatgagcctt tgtaagagtt gattttctcc
     1921 agttagtaca gaatgctatg gcaattggtg tggggctttt ctttcctggt gggtcaactc
     1981 ttagcgtttc caatcttaga gggagcaccc tcataactca tccctgagca gtgccactcc
     2041 tgagctctgg actctggcca ctcttgaaca gctagctgct tgtgataggg cctcacccca
     2101 agaggacagg caagagatgg aagcatgtcc cagctttctc aggaggactt tggggaccca
     2161 ggcaaatgac aataagaagg cttggactgg ctctgtcctc tgtggggaca ttcaagtctt
     2221 tgagatgtta gttggtagga aagcagggag gagaaacagg agcataggag gtagagagag
     2281 gccaaggaag ctatgccgga aggctgaggg agggagaagg tagcaggtgg cgtcttctcc
     2341 cttgatgatg tccctcctca ggcagcaaat gggtactctc cggtgctgcc atccccaaga
     2401 catagatcct gggaaagcca caaaagcagc agtcagtgtg aagcccctgt gacagcacag
     2461 gccttctatc tggaactctg acagaggagc ctggtgtcca ctcaatgatg cttcactgaa
     2521 cctctgctcc atgatggagg cttagcagtg gccacacaca cacacacaca cacacacaca
     2581 cacacacaca cacacgataa atataaatac atccatcatc tgtcttttta aatgttaatt
     2641 gtgccctcgt gtctgtctga cgtctggtcc tctcgaaagg tatttttgtt attatttgtt
     2701 cttaattgtt cattgtggaa ggcaatgctt taataaaata tatttggtgg a
//
