LOCUS       NM_001162945            6282 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus metaxin 3 (Mtx3), transcript variant 1, mRNA.
ACCESSION   NM_001162945
VERSION     NM_001162945.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6282)
  AUTHORS   Adolph KW.
  TITLE     The zebrafish metaxin 3 gene (mtx3): cDNA and protein structure,
            and comparison to zebrafish metaxins 1 and 2
  JOURNAL   Gene 330, 67-73 (2004)
   PUBMED   15087125
REFERENCE   2  (bases 1 to 6282)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT025667.9.
            
            On Feb 15, 2019 this sequence version replaced NM_001162945.1.
            
            Transcript Variant: This variant (1) represents the protein-coding
            transcript.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219383.158424.1,
                                           SRR7345562.4565365.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-100               CT025667.9         82838-82937
            101-170             CT025667.9         83276-83345
            171-247             CT025667.9         83691-83767
            248-340             CT025667.9         84931-85023
            341-523             CT025667.9         85608-85790
            524-600             CT025667.9         85887-85963
            601-758             CT025667.9         86988-87145
            759-847             CT025667.9         88360-88448
            848-6282            CT025667.9         90854-96288
FEATURES             Location/Qualifiers
     source          1..6282
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 47.78 cM"
     gene            1..6282
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /note="metaxin 3"
                     /db_xref="GeneID:382793"
                     /db_xref="MGI:MGI:2686040"
     exon            1..100
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..958
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /note="pleckstrin homology domain containing, family M
                     (with RUN domain) member 2"
                     /codon_start=1
                     /product="metaxin-3"
                     /protein_id="NP_001156417.1"
                     /db_xref="CCDS:CCDS49328.1"
                     /db_xref="GeneID:382793"
                     /db_xref="MGI:MGI:2686040"
                     /translation="MAAPMELSCWGGGWGLPSVHSESLVVLAYAKFSGAPLKINIIDN
                     TWRGSRGDVPILTTEDSIVSKPAKILNFLRKQKYNADCELSAKQGADTLAYIALLEEK
                     LLPAVLHTFWVENENYFTVTKPWFASRIPFPLSLILPGRMSRGALNRILLTRGEPPLY
                     HVQEVEAQIYRDARECLNLLSNRLGTSQFFFGDTPSTLDAYVFGFLAPLYKVSFPKVH
                     LQKHLKQLCNLCRFCDDILDSYFRPGPGGVSPAGQEMVDANLQKLTQLVNKESNLIEK
                     MDGNLRQSPQLLPRKLPTLKLTPAEEESNSLQLLSP"
     exon            101..170
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            171..247
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            248..340
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            341..523
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            524..600
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            601..758
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            759..847
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
     exon            848..6282
                     /gene="Mtx3"
                     /gene_synonym="4930470O13Rik; EG624619; Gm1194; Gm6514"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggtcagc cccggcaaga tggcggcccc catggagctc agctgctggg gaggaggctg
       61 gggtctccct tcggtccaca gcgagtcctt ggtggtgctg gcttatgcca agttttctgg
      121 cgcgcccttg aaaatcaata ttatagataa cacctggaga gggtcaagag gtgatgtacc
      181 aattttgaca actgaagaca gcattgtttc taagcctgca aaaattctaa actttctaag
      241 aaaacagaaa tataatgctg actgtgagct ctcagcaaaa caaggggcag acacactggc
      301 ttacatcgct ctcctggaag agaaacttct ccctgctgtg cttcacacct tctgggtgga
      361 gaatgagaac tacttcaccg tgacaaagcc gtggtttgcc tctcgtatcc ctttccctct
      421 gagtttaatc ctgccgggaa ggatgtctag aggagccctg aataggattc tcttgacaag
      481 gggagaacct cccctctacc atgtccaaga agtggaagca cagatatata gagatgccag
      541 ggagtgccta aatctcctat caaaccgatt gggaacatct cagtttttct ttggtgacac
      601 gccttccacc ttggacgcct atgtgttcgg tttccttgcg cctctttata aagtgagttt
      661 tcccaaagtt cacttacaga agcatctgaa acagctctgc aacctgtgcc gcttctgtga
      721 tgacatcctg gacagctact ttaggccagg ccctggaggt gtctccccag ctggacaaga
      781 aatggtagat gcaaacctgc agaagctcac gcagcttgta aataaggagt ccaacttaat
      841 tgagaagatg gatggcaacc tccgccaaag ccctcagctt cttcctcgga agctgccgac
      901 cctcaaactg actccagcag aagaggagag taattccttg cagctgctgt caccctgaca
      961 gtcacagcca gttgcagctg gtctaatgat tgttgcagtc attgctgatg ccaagtgcac
     1021 agagactcaa agaatgctgt aataggttta agactagagc agagggagct gtatctgact
     1081 ctttttaaat taggaaagct attattttag cttggcagtg cattttaaat aaaggtgaat
     1141 gctaagcgaa ctgggtgggt gggtgggcag gacaagccaa tggtactgta tataaaaatc
     1201 ctgccttaac cttggcagat ctttgccttt ggttcaggtg ttgctgacca aaagctgcaa
     1261 ttctgttgtg aatgtacatt tttaatgtat ttaagttaat ttattaactt agtttttctt
     1321 agacttgtct cagtacataa tatgtggctt tttggctgag accttattct tttaagaagt
     1381 ctgatgccga ttttaggaac caggaaaaat agaaattatt tcaatagaaa agcctatatt
     1441 taattttaaa aagcaatgag gaatatgctt cttaattgtt ctctcataaa tctgctcctt
     1501 tggcagttta ctgctacata tgcaaatgtt aaaggtggtt tatataatac ccctgatagc
     1561 gcacatgcgc atgcacgcac gcacacaagc cagtgtgact aagtacttgc tgataggttt
     1621 gctctaagct agcagagatg aacatggcag ccttagacct gtgtatttag tacaccattg
     1681 cttacgtgtc tcactcttat atcaactcca gaactggaag tctagctgtc tactgtattg
     1741 ttattgtgct cacctaactg ttcagcctcc ttgggatgag ccgtggcgag cgtctcagat
     1801 ctgctcccgt gtgtcgggtc tccgtgatcc atttgactca aagcagtttg tttcctaata
     1861 cgcatatcat gtagtcacac tttctgacaa actattattt cctgtgcatt tttaattaga
     1921 gttgaaggat ccaaaggaat gagtcaatag caggtttctc agacgattta cagttattgg
     1981 ttgtgaatga gccgttcaag gatttgttgt gtggtagttt tacatataat agaaacttgc
     2041 tgattttagt ggccaacgtg cttctgttat tgtaaaacta cttctgggat tttaaaaata
     2101 ggaccatgtt tgggattagt gtcttacaag attactgtgg tgctcagaaa atgttgccaa
     2161 gttctgcaga aaccaggctg tgttgtctag agactcggct actgcgagca gagcggagct
     2221 cagctgcatt tgacctacat cgccccaggt tgctctgttt ttggtagatg taagtcttag
     2281 gtcactgtaa atactcattc ttgaagcttt aaataagaca caggtagccc tcacggtccc
     2341 atccacctct gtgagtgcat ttgcatttag gacatgtact caacgagttt cacagagatg
     2401 ctttaacaaa gggtgtttgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtat gtgtgtgcat
     2461 agagtgtgcg atgtaggggt gaatgtgtgc tagtgagtgt gggtttgagc atgtgtgtgt
     2521 gagtgaatgt gtgtagggta agtgtatgtg tgtatgtgtg tgtggtgtat gtgtgtacgg
     2581 gaggtgtgag tgtatgtatt tttgcgatct aaaacaagtt acaacaatct gaaatctgag
     2641 tatatctgag tattgtgttt taaatgtaat gatcaagagg cttcgttgtc tctaggattg
     2701 actttatatt gaagaaggat ggttgacaca ttagtcatat atctgcttat gctttaatca
     2761 gggttagtca ttttcaacta gtattaatgg taaaccttcc aaaaagtatt tgaagtagtt
     2821 tataattgta aaatgcatgt aagagtagga caattcttct tgaaagctga cagttcctaa
     2881 gagaaagaac cgtatcaaca gaacgagacc tcactctgtg ggtgatgtta gaaggtgatt
     2941 ctgaggtaag ttctgctgag gaaggagcag gggcttacat gatagaagaa tgcagcaggc
     3001 catgttcaga cgactccaga cttcaaccag ggagttactg tgctgtgtgt gcaccaaact
     3061 cttcctaatc attttagaat aacaagcact cattctgttt agtggagagg atgtctgtaa
     3121 agtgacttgt tttttttttt tttatggtca cactgctctg aactgccttt agccttatat
     3181 tctgtagccc atgtgcttca aaaccacatt tctgagctgc agaaccttag ttagctgagt
     3241 aagaacttag atgttagtac tgagttcagc tctatttgtc taagtaaatg ggacaggagg
     3301 aagctgtaac tgagcataga atacttcagg gaccaggcac actgagaagc tcttagaagg
     3361 aggtagttcc tcagactgga caaagggcct tggtgaccct gtcaggatgt atgtgcgtga
     3421 gtttgctgga gaaaatggtc cacagccctg accaaacact gtgagccatg ggtttcagag
     3481 gtggtggtag cagccagcat gggaacaggg attatgccca tttttaattt tgttgatttt
     3541 acagagctag aaaaaaaatt tagtttgcta attcccacag gaaaacaccc tcagtgagca
     3601 ctgtcatcac agtggtgacc taacactgaa gaaaccacag acaagggcat gaggggaccc
     3661 cacaaaaggc tcacagtagc aaatgtcggg gtactagagg acctgatact ttttggaagc
     3721 aaccattttt atttccagtt ataatcccta aaaatttata actgataaat acagtaacac
     3781 agggaacaaa gatacttaag ttaaatctaa gttaaagtgt tttcaaagtt taaaaatggg
     3841 caaaatgaac atcaacagag gcagaaactt gtggaatatt gtaagaaaac cactttgttc
     3901 aggtggtatt tgaattgggt actgcatctc aagacatgca cctaccaagc ttgctcaaaa
     3961 tgattttttt tttttggtag ggtcaacagt ttttcaacag ccacaacaat aaccactcaa
     4021 aggcagaata taaatattta aatatgcgtg ggagctgaat ggatggctca gtacttgaga
     4081 gaacgcactg ctcttgctga ggacgtgggt tcagttccca ggacctctag cagggggttt
     4141 acaaccttct ggaactctag ctccagggga tctggcgccc ccttctggaa tccatgagca
     4201 cctgtactca aaatgttcct gtacccaccc cacccacaca cacatacaca taattaacag
     4261 taaaatatat ttaaatatac ttaggaagct gaatgatggg gccatggaat atctccttcc
     4321 atttttgtaa tgctttaaga gtctataatt attccaaaat aaaaggattt tcaaaaagca
     4381 aacctaatag agtaagttcg tcactatcta catatctcta tcttaaaatt taacactgca
     4441 gacttagtat tcagttccaa atgagaacta gattatatac tgataatttt tttatttcac
     4501 tcttgagttt aaagaaaaag gggctcaggt ttctaacatg cttcccggaa gatcgccctt
     4561 gccttgtgag aatgtttcta acaacctcac accaaaacgg attttccatt aaaatatcaa
     4621 gatgcttatg attttacgtt tctaatgtgt gttaactgaa gcatcactgg gcttgagagt
     4681 gctgcccgtc atgatgagaa ggccaggggg cctttggttc tttgttagtg tggaagttgc
     4741 tgttggtgtt gcaatcgctg ggaccccagg atgcttgttt ggcactcagt gctgttgtgt
     4801 ccaaagcaaa tgaggactct gggaatttaa aaggcttaaa aatatttttc cagaaaaaca
     4861 gtccgtggat tacttaaaag aattaacatt cttaaacagc accatgtgat ggaaggggag
     4921 ctggagctga ttgcttgtga gtagtgaagg tgcgttgtga tagaggatcg tgccaacaga
     4981 ataagcagct tctttcaaag gggaaacagg ctagttgttt ttatgccctc gttattatta
     5041 atctgaagtt ataaggtaaa aaacatttag tttctgcaag agtagattct aagagggaat
     5101 ttggcagaat atgttgttct actaagtttg gaaaatgctg tattgtgcag agctgacttg
     5161 ctgtaggctt ttcagagcct ttgatgtgta aatgtgtgtt tttggtttct agcttcagag
     5221 atgttttact ttattagcaa agaggacaga ctgaacaagg ctgcgcgcag gcgcatactc
     5281 atcccccagg gggactcatt gtctccagta agcacctcca cttaatacca cttccctaac
     5341 ttattttact gaggattttt taaaagtcga tgttttatgg gatttgtgtt ctgagaaatg
     5401 tccttaggag aacattgagg atttgttgtc tgtgctcatt acaaagtttc tgctttgagt
     5461 gtttctctgg tgatggtaag ggcgactaaa caagctccat ttctcccaga gtctaaacca
     5521 gctcaccagt gaggccatgg cgttttgtca gcctctgcag catatataca cagtcgcagg
     5581 ctcgatgctc cagggtttgg atgtacatta gaagcacaac ttgccgtgcg gtttgggtgc
     5641 tggagtaatg gtgagcaacc aaccacagga aaagctcttg gaccttagtc ctgacgcttc
     5701 ggttttccac tcgaagatta gagcaatgcc tgtaatcatg tagtttacat atcccagatc
     5761 tttggcgatc actggaagtg ccctgccaga gtttgcatca gcctctgaga gtcattggag
     5821 aaggagaagg ccattctggc tgcttgttct ttggtctgtg ggctgctggc gtcttgatct
     5881 gatggcggac gggtgtatac aagcctttaa atgcataaag atgatttggg tttctcttac
     5941 gtcttattgt tttataaaat agaaaccatc cttaagtgaa actgaggttt tgtagcttca
     6001 ctttagcttt ctggaagatc aacagaggaa gggacaagag ctgcatatga tgtttattgg
     6061 ctccgtctcc caaggcagtc tctggatggg aaacaacgta agcatctgtt ctagtgtgca
     6121 aataccatag ccttgcctac tgtgaatgta ttttacctag agctgatgta gaaataccca
     6181 gaagtggaaa tgatggtcac tgttaagaat gtattctgac aaatgagaaa ctggatataa
     6241 tctcaaaata gctattttct caataaaatt tcaaatcatt gg
//
