LOCUS       NM_001361593            2075 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus mitochondrial nucleoid associated protein 1 (Mtnap1),
            transcript variant 2, mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001361593 XM_006533473
VERSION     NM_001361593.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Wu,H., Zhang,W., Xu,F., Peng,K., Liu,X., Ding,W., Ma,Q., Cheng,H.
            and Wang,X.
  TITLE     C17orf80 binds the mitochondrial genome to promote its replication
  JOURNAL   J Cell Biol 222 (10) (2023)
   PUBMED   37676315
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Ko,M.S., Threat,T.A., Wang,X., Horton,J.H., Cui,Y., Wang,X.,
            Pryor,E., Paris,J., Wells-Smith,J., Kitchen,J.R., Rowe,L.B.,
            Eppig,J., Satoh,T., Brant,L., Fujiwara,H., Yotsumoto,S. and
            Nakashima,H.
  TITLE     Genome-wide mapping of unselected transcripts from extraembryonic
            tissue of 7.5-day mouse embryos reveals enrichment in the t-complex
            and under-representation on the X chromosome
  JOURNAL   Hum Mol Genet 7 (12), 1967-1978 (1998)
   PUBMED   9811942
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL603706.13.
            
            On Mar 29, 2018 this sequence version replaced XM_006533473.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC026908.1, AK171307.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-278               AL603706.13        57952-58229
            279-1726            AL603706.13        61292-62739
            1727-1831           AL603706.13        65247-65351
            1832-1939           AL603706.13        65913-66020
            1940-2075           AL603706.13        68030-68165
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 79.15 cM"
     gene            1..2075
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /note="mitochondrial nucleoid associated protein 1"
                     /db_xref="GeneID:276852"
                     /db_xref="MGI:MGI:106356"
     exon            1..278
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /inference="alignment:Splign:2.1.0"
     exon            279..1726
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /inference="alignment:Splign:2.1.0"
     exon            1727..1831
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /inference="alignment:Splign:2.1.0"
     exon            1832..1939
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /inference="alignment:Splign:2.1.0"
     exon            1940..2075
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2055..2060
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /note="hexamer: AATAAA"
     polyA_site      2075
                     /gene="Mtnap1"
                     /gene_synonym="D11Wsu47e; Gm57859"
                     /note="major polyA site"
ORIGIN      
        1 gttggtgggc tccgggttct aagagtgtgc ggcgtggaac ttcgcgtctc cgaacggtgc
       61 ggagcccgtt ccatggagta gctaagggct gggctatttt tccgcgacct ttgttgcagg
      121 tcaagagagg agtgcggaac aggcgaacgg gataacggag ttccgtaccg ggaagggcca
      181 cgcccacctg ctggaagagg ccggaccgag aggtgtgggg gagaccggca ggcgtgggaa
      241 cgcggcggtg tggacggagc tgcctcgcgg ctggcgagga agagcatggg tgcagccgag
      301 ccccggatgg aagtgtgtcc ttattgtaag aagccgttta agcgtttaaa atcccacttg
      361 ccgcactgta aaatgagagg accgtccata tctgctgatc aaaatgtttc tcagtccaag
      421 ccagctgcac ttgctcaaaa agagaagagt cctaccagag acttgaccag agctaaagag
      481 aaggagctag aggtagaccg tccgaaaaga gctgtgaaag cagaaaccag cagggcatcg
      541 tggacagctg cagcctctcc gcttccagag gggatcttgg gaagcgtgcg gataacaaaa
      601 gcagaaggag aaaacaaaga tcaaaatcag ttctccttcc aagcactcag ccaggccaag
      661 ccagaggtga ctctgcagag agtcacaacc ccttggtctc ctgcgtcaga tgccacctct
      721 cctaagagag aactcaccca agatgtgtct gagtccaagg gaagtccgtg tccctcagag
      781 acagaagcgc cttcactggt cagctcagtg gaaccttttc ttgctaatca agatagaaaa
      841 tattcatcaa cccagcctca tgctaaccca gccacttctg tcgggctcaa gttaggcaca
      901 gttgaccccc aaagacagaa gcttcgggta aaattattag atgtgcctct tagtgatcgt
      961 cattctccaa agagtggcag ccacggggtt cagagagtaa caccctcagt gttgagcagg
     1021 gaggaaggtt cccaagatgg aggccacctc ttgggagtct ctgcccaccc tggtaacacc
     1081 aagacccaga agtcagaatc actcctcctg ggccttcaca ctggcctgct gggtaaagca
     1141 ccggtcagag agcatcagga acttggcctt ggcatggagt tgagccagag caagggaaat
     1201 actgagaaca ggatgtctgt caccaacgta caggaagggg ctggcttggg ccaaggtggt
     1261 aaggacccca ttacagccac aaaggcaaag ccacataccg ccctcgaact taggaacgtg
     1321 ttcatgccgg agtcagggaa tcagagcctc acctctccgg ctgtgacatc tactccagaa
     1381 gagaatgctc aattctgtgg ccaaagccat gtccctgcca taacactgtc agtgggaagt
     1441 gtgagagatg ttctggaacc cacatctttc taccagcccc acacggccca ggcagggcac
     1501 tgcctaatgt catactcagc tcagtatccc gttcctaaaa ccttcgttgg gcatgttgct
     1561 gctgttacct caggggctcc tcccaggtcc gtgggactgg agtggtttcc agaactctat
     1621 cctgcttatg ttggactagg ggtgctgcca aggaggcctc cgccttggag cttagcagct
     1681 caggtccctc ctcttcccac tttgcagggc aggagcgtct cgaaagttcc ttggtgggga
     1741 cgaagttcgg ctgatagcag gagtctggaa cccctgacgc ttacaacttc cagcctccct
     1801 ctaatgagac tcttgggagc tgtgcacaaa gggtgggtgc agtgcaacac caccataaag
     1861 aagagtggtg tcggtggtct cacgatgctc ttcgctggct actttatcct gtgctgtaac
     1921 tggagcttca agcatctgaa gctgcagcac tggcgtaagt aatggcgagc atgtccggga
     1981 gccacagaga gtgacagaca gccgagagca gaagaaacac tttacatttg taccaggtcg
     2041 cgaagggtgc aaataataaa actgctgaaa tcaca
//
