LOCUS       NM_172742               5205 bp    mRNA    linear   ROD 16-DEC-2022
DEFINITION  Mus musculus myotubularin related protein 10 (Mtmr10), mRNA.
ACCESSION   NM_172742
VERSION     NM_172742.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5205)
  AUTHORS   Loupe JM, Pinto RM, Kim KH, Gillis T, Mysore JS, Andrew MA,
            Kovalenko M, Murtha R, Seong I, Gusella JF, Kwak S, Howland D, Lee
            R, Lee JM, Wheeler VC and MacDonald ME.
  TITLE     Promotion of somatic CAG repeat expansion by Fan1 knock-out in
            Huntington's disease knock-in mice is blocked by Mlh1 knock-out
  JOURNAL   Hum Mol Genet 29 (18), 3044-3053 (2020)
   PUBMED   32876667
REFERENCE   2  (bases 1 to 5205)
  AUTHORS   Stefan M, Claiborn KC, Stasiek E, Chai JH, Ohta T, Longnecker R,
            Greally JM and Nicholls RD.
  TITLE     Genetic mapping of putative Chrna7 and Luzp2 neuronal
            transcriptional enhancers due to impact of a transgene-insertion
            and 6.8 Mb deletion in a mouse model of Prader-Willi and Angelman
            syndromes
  JOURNAL   BMC Genomics 6, 157 (2005)
   PUBMED   16280085
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 5205)
  AUTHORS   Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco
            G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T,
            Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T,
            Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ,
            Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A,
            Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso
            J, Hide W and Ko MS.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CN669724.1, AC139849.5, CK634659.1, CF734341.1 and CB600359.1.
            
            [WARNING] On May 2, 2023 this sequence was replaced by NM_172742.3.
            
            On Jan 23, 2007 this sequence version replaced NM_172742.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC041672.1, SRR1660825.16.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                CN669724.1         1-26
            27-27               AC139849.5         106236-106236
            28-177              CN669724.1         28-177
            178-765             CK634659.1         64-651
            766-1353            CF734341.1         145-732
            1354-1983           CB600359.1         25-654
            1984-5205           AC139849.5         156125-159346
FEATURES             Location/Qualifiers
     source          1..5205
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7"
     gene            1..5205
                     /gene="Mtmr10"
                     /note="myotubularin related protein 10"
                     /db_xref="GeneID:233315"
                     /db_xref="MGI:MGI:2142292"
     exon            1..172
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            173..233
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            234..370
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            371..443
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            444..586
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            587..677
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            678..858
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            859..946
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1035
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1036..1166
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1236
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1237..1307
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1477
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..1648
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1649..1831
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     exon            1832..5205
                     /gene="Mtmr10"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4783..4788
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mtmr10"
     polyA_site      4806
                     /gene="Mtmr10"
     regulatory      5184..5189
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mtmr10"
     polyA_site      5205
                     /gene="Mtmr10"
ORIGIN      
        1 cagtccgccc ggcggggcgg gccgcagacc cggcctgggc agctgcaccg ggaacgctga
       61 accgggagac ttctgaccgg ccatagggcc ggggcgcaca ggcggcggca ccatgttctc
      121 tctcaagccg cccagaccca gcttcaggtc ctacctcctg ccgccggccc agactgacga
      181 taagatcagt tccgaaccga agattaaaaa gctggagccg gtccttttgc caggagaaat
      241 tgttgtaaat gaagtcaatt ttgtgagaaa atgcatcgca acagacacga gccagtatga
      301 tttgtggggc aagttgatat gcagtaactt caaaatttcc tttatcacag atgacccaat
      361 gccattacag aaattccatt atagaaacct tcttcttgga gaacatgatg tccctttgac
      421 atgtattgaa cagattgtca cagtgaatga ccacaagagg aaacagaaag tcctaggtcc
      481 caaccagaag ctgaaattca atccaacaga attaattatt tattgtaaag atttccgaat
      541 tgtcaggttt cgctttgatg agtccggtcc tgaaagtgcc aagaaggtat gccttgcaat
      601 agctcattat tcccagccaa cagacctcca gctactcttt gcatttgaat atgttgggaa
      661 aaaataccac aattcagcca acaaggttaa tggagtatcc tcaggaggtg gaggagtatg
      721 gagtggagct ggcagtaccg gcagccagag gacgccactg ttcgaaactt actcagattg
      781 ggacagagag accaagagga caggcgcttc tgggtggaga gtttgttcta tcaacgaggg
      841 ttacatgata tctacttgcc ttccagaata ctttgttgtg ccaagttcac tagcagacca
      901 agacctgaag atcttttccc attcctttgt tggaagaaga atgccattct ggtgctggag
      961 ccactctaac ggcagtgctc ttgtgcggat ggccctcatc aaagacgcgc tgcaacagag
     1021 gaagattgac cagaggatct gcaatgccat aactaaaagt catccacaga gaagtgatgt
     1081 ttacaagtca gatttggata aggctttgcc caacatccaa gaaatacaag cggcatttgt
     1141 aaaacttaag caactgtgtg taaatgagcc ttttgaagaa actgaagaga aatggttgtc
     1201 ttcactggaa agtacccggt ggttagagta cgtcagggct ttccttaaac actcagcaga
     1261 acttgtgtac attcttgaaa gccagcgtct ctctgtagtc ctgcaagagg aggaaggcag
     1321 agacttgagt tgtctggtgg cttctctcat tcaagtgatg atggatccat acttcaggac
     1381 aattactgga tttcagagtc tgatacagaa ggagtgggtc atggcgggct atcagttcct
     1441 agacagatgc aaccacttga agaggtcaga gaaagagtct cctttattct tgctgttctt
     1501 ggataccacg tggcagctgc tcgagcagta cccagctgcc ttcgagttct ccgagacgta
     1561 cttagcagtg ctgtgtgaca gcacccggat ctcgctgttc ggcaccttcc tcttcaactc
     1621 tcctcatcag cgggtgaagc agagcacaga gtttgccatc agcaaaaaca ttcagctggg
     1681 tgatgaaaag ggcttgaaat tcccctcagt gtgggactgg gctcttcagt tcactgcgaa
     1741 ggatcgcact cttttccaca accccttcta cattggcaag agcacacctt gtgttcagaa
     1801 cggctccagg aagtctttta agcgcacgaa gaagagctac agctccacac tgagaggaat
     1861 gccctcatgc ttgaagaatg ggatcatcac tgaccaagac ctgctgcctc ggagaaactc
     1921 cctcgtcctg aagctgaagc cggacccgcc tcagcacacc gacagccagc acagtggagc
     1981 cgagcagtat tttaaagagt ggttctccag accagccaac ctacacggca ttatcctgcc
     2041 acgtctctcc ggaacacaca taaaattgtg gaaactgtgc tacttccgtt gggtccctga
     2101 ggcccagatc aacctcgggg gctccatcat ggccttccac aagctctctc tcctggctga
     2161 tgaggtggac atgctgagca ggatgctgag gcagcaccgc agcggcccct tggaagcctg
     2221 ctatgcagag ctggaccaga gcaggatgta cttccgggcc acggggccac atgacacgct
     2281 ggggacacca gagttcctct cctcttcatt tccattttct cctgtaggaa atctgtgtag
     2341 acgaagcatt ttaggaacgc cattaagcaa atttttaagt ggggccaaaa tatggttatc
     2401 tactgagaca ctagcaaatg aagactaaat taaggtattt ttctggacat attgagagaa
     2461 gctggacatt tccctctctg aactgaaatt gctaactgag gcatttaaaa cattttatat
     2521 gtaagaaatt tgcacaaata tttaaaccat gtttaatcat gctgccttca gttattctaa
     2581 gggcagtgtg acttttgggt ttgacctttg ggtctggctc atttgggtca tttgcagcac
     2641 gaatttccca ttgttacact tgatatcaaa atattgaggt tcctctgcca tgcgaatttt
     2701 gccaacttct attttccaac ctactaaagg tgatctgata gtcagattac aacccagaga
     2761 aagtggatag ggaagttaat aaattagtgt atttaatgca tttctagatc atctgataaa
     2821 actcccaaga ggcctcagtt ggcatccacg tgtttagcta atattcttag cttgtgttct
     2881 gggtttagat tttagttcac ctcagttagg acctaagatc actgtgtttc aaaatcatgg
     2941 atttgcttca attccataca actaacttaa aagatgcact gtaattttaa agcattcact
     3001 gtagctattt aaacctagaa gtgcctttga cattcagata aaagtagcaa agaagctaga
     3061 ataacaaaat tttcaaaatt gggctcttta gaccccactg tatagtggaa atagcttttt
     3121 gccaacaagc ttacatcaat agccaggagt ctccagagcc acagttttgt ccctcagaaa
     3181 gtcaccctgc catcttagag gctctccagg tagaagatgc ccagctccag ctgtggctga
     3241 gggtgccaag tccatgcaca ggagcatgcc acaggcagac cgcaggctgt agggatgctc
     3301 tggcctcctc ctgagcacct cagctgtcat gctgacgcag gccaacactt ctcctcagaa
     3361 atgacaggca gggtcacgag atggacacat gcacagacta gagaggaaga cttcctcagt
     3421 tgttgccatt ttaatacaga gatgcacccc ttcctggctt gggggcaatg ccaagaggct
     3481 gagaatctga agccttgatc caaaccatga tgagaacctg gtcagcttca cccagccctg
     3541 tgcttctgca ctcacgaatg ctcgtgcgtg tgtgcagggc ttcttctccc tgtttaaagg
     3601 tggacatgtc ctaatggaca atggcagtgt cttaaattgc caccttggat tttgaaatac
     3661 tttatagtaa agtgttgatt tagtttgttt ctttttcaaa aactgaattt ctcaaaatag
     3721 tgtgacctgt ctatatgctg tttagccatt tctactaaat tgaccttttc taactgttta
     3781 ataatgtctc tgcatttaac agggcagatg ttcttatgtc taaaaaagtt cttatcttat
     3841 ggctaaactt aatgttttca ctcatctgtt gctataaaat aagggctctt gtctacttat
     3901 acaaatagca ttatcagcag tgaggatgcg ccagccgttg gccacacagt tagccctggt
     3961 ccgagacacc ggggtgtcac cactggaacc tgacagtaat ggcccccatt ttcatgaagc
     4021 tgctttgcta cttctataag ttgttctaga tttattttgc ggttgagaat tcgtttcttt
     4081 gtaattttca tccctcacat ttacttcagc tcctttcaga acttttttgc caacttacaa
     4141 gaaggtcagg tactattaac aaacactact ttatgatgga aattgcatat ttttgtatgg
     4201 taatcaattg taaatgttct tctattttaa ctgggtggtt gttacatcac gattattgta
     4261 caacagctta ctatgtgaaa cagctccaga gtcctagtgt ggcctatggg acagctgcct
     4321 ggcacctctg caaacaaaag tgaccctgcg gtgacagaag aggtaagcgt ggctgtgagc
     4381 agcataccaa agagctcaga agcactctct ccgaagccac ccgggcagag cctgtgctgg
     4441 cggcgcccat gcaggggctg atgacactgg gcatcctaat gctgactcca gaggtcaaac
     4501 tgtcttactg ttgctttatg ttgggaacca attctaaaac caaaaatgcc taactttact
     4561 taaggaaagg acattaattt ctactgacag aagatgaaaa ctgttcaaca tgtttttcaa
     4621 caagatcctc ttgctgtagc agtaacctca agcaattaaa acttggtgtc gagacaaaac
     4681 taaacccttt gtgcctaaat ccaactgctg agcctaagca ggctgagcag gttgactgga
     4741 tcctgcccaa cagagtggat gtaaagggct ctctgactgc taaataaaat ctccatggat
     4801 accgtttgta gtcgtcacca gtatgaaccc attagaacac agactggtga tggaaggctg
     4861 cagctcccac ctggatgcac acacccttca ttcgtctctt ttgaaaactc tctaaggtgg
     4921 ggtggactaa cagctttcac gtcagttcag aacggactgc agctcttttg ttcttcccat
     4981 tcactaaaaa ctaacatggg cattctgctt cctcgagtcc ctggagactg ggaccccaca
     5041 ttgagttgag ccagatgtac agttaagtca cccttttcta ggtcctttgt ctaacctgac
     5101 tctcccagca gtggtcgtga gcagccccat tacatttaca gtgtatcaaa ttaacctgat
     5161 ctagccaatg gagatgttcc taaaataaat gtacaaatgc cttgg
//
