LOCUS       NM_001163833            2140 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus MSL3 like 2 (Msl3l2), mRNA.
ACCESSION   NM_001163833 XR_035079 XR_035080
VERSION     NM_001163833.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153521.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC037487.1, AK155382.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               AC153521.7         117280-117392       c
            114-2140            AC153521.7         107429-109455       c
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 28.5 cM"
     gene            1..2140
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /note="MSL3 like 2"
                     /db_xref="GeneID:73390"
                     /db_xref="MGI:MGI:1920640"
     exon            1..113
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /inference="alignment:Splign:2.1.0"
     exon            114..2140
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             441..1556
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /note="male-specific lethal 3-like 2; male-specific
                     lethal-3 homolog 2; male-specific lethal-3 protein-like 2"
                     /codon_start=1
                     /product="MSL complex subunit 3B"
                     /protein_id="NP_001157305.1"
                     /db_xref="CCDS:CCDS48561.1"
                     /db_xref="GeneID:73390"
                     /db_xref="MGI:MGI:1920640"
                     /translation="MATLGCAPKDDGEGKDEGGSDRGDGDSKPKGKKEVEPHTRREAD
                     ERAMRIPIPEVLQQRLADDCYYINRRRRLVRLPCQTNVGAILECYVRHFSASVLALGD
                     RRPQPQRAAPERSVGLCREMADGLRITFDHALPLVLLYPQEQAQYEMVTSSTFFFPTE
                     ERASDAGRSQEAPWPGPSPPQPSESQAVAGPAAPKRRRAEAEATRAPRRSTRHSTHCH
                     WQAEDRASPQAKRSVPKLFPHLQKTPVHSAAPSPIALTPGKEGSAMFAGFEGTTEEIN
                     EILSWKLVPDNYPPGHQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHL
                     DLFLRFLAEYQADFFLESAYVSACEAHYSSKNPRTLC"
     regulatory      2113..2118
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /note="hexamer: AATAAA"
     polyA_site      2137
                     /gene="Msl3l2"
                     /gene_synonym="1700060H10Rik; Msl3b"
                     /note="major polyA site"
ORIGIN      
        1 ctgggcttca aaagcagtcg aaaactgcgg ggtgagaaag gattgcacgg ttggctagga
       61 ttcccacagc gagcagttcg gttgcagttt tcctgaatcc ccaccttgat gagtcctaca
      121 gaggctggtc cttaagaaaa aacaacaact gaatttcaat tcgactcagg aagtgctgcg
      181 cttccagctt gaccactgcc gcgggctcga gtgctgtgca gcgctgagat cgtcacacgg
      241 ttgctgggga aaaaaactgg cagaaagttc cagactctga tctatttgaa tggctgagat
      301 gggaggtgac agcccgagac ctctggctct gtgaagactc atgaagtctc aggttacagt
      361 gtgagcctgc caggaaaaca gcagcccgcc agaggagccc aggccggagg ggcgagagcg
      421 gcgcgttgcc agtgacgacc atggccaccc tcggctgcgc acctaaggat gacggtgagg
      481 ggaaggatga aggagggagt gatcgaggtg atggcgactc aaagcctaaa ggcaagaaag
      541 aagtggaacc ccacacaaga cgggaagcgg acgagcgggc catgcgcatc cccatcccgg
      601 aagtgctcca gcagcggctg gcggacgact gttactacat caaccgcagg cggcggttgg
      661 tgaggctgcc ttgccagacc aatgtgggcg ccatccttga gtgctacgtg cgccacttct
      721 cggcgagcgt gctggccttg ggggaccgcc ggccgcagcc ccagcgcgct gcgcccgaga
      781 ggagcgtggg cctgtgccgg gagatggcgg acgggctgcg catcaccttc gaccacgcgc
      841 tccccttggt gctgctctac cctcaggaac aggctcagta cgaaatggtc acctcctcca
      901 cctttttctt ccccactgag gagcgagcca gcgatgctgg caggagccag gaggcgccct
      961 ggccgggccc gtcgcccccg cagccctcgg agagccaggc cgtggcgggg ccagctgccc
     1021 ccaagaggcg cagggcagag gccgaggcaa cgcgggctcc caggcgatcc acccgccaca
     1081 gcacccactg ccactggcag gctgaggacc gggcctcgcc ccaggccaag cgcagtgtgc
     1141 ccaagctgtt cccgcacttg caaaagacac ctgtgcacag cgcagcaccg tcccccatcg
     1201 ctctgactcc tggcaaggaa gggagtgcca tgtttgctgg ctttgaaggg acaactgagg
     1261 aaataaatga gatcctctcc tggaagcttg tgccagacaa ctaccctcca ggacaccaac
     1321 cgcctcctcc ctcctacatt tatggcgcgc agcatttact gcgactgttt gtaaaacttc
     1381 cagagattct tggaaagatg tccttctctg agaagaatct gaaggcacta cttaagcact
     1441 tggatctctt tctaaggttc ttagcagaat accaggctga cttcttcctg gagtcagctt
     1501 atgtctctgc ctgtgaggcg cactatagca gcaagaaccc caggacactg tgttaaagtt
     1561 ttaatgtctc tgtaagcata gctgctccac ctggctttgt gttcagtgtt ctaggttggc
     1621 ccaccttggg ggagagggga caggcttgga tatttgagtt cctcacatac tgcagttatt
     1681 tttgttaaca accaattact tccttgcttt gttttgttgc cttgcctgta gggaggtaaa
     1741 gttgcttaat tagttaatgt ataaaaatac atgccattgc acaggctgcg tgtgacagca
     1801 ggaagcagcc tctcctatgt tcagagggaa tattccaaac tatacatagg ttctgctctt
     1861 ctggtagaca tcacacaggc tgttaacaag aattacggtg tttagttttc ttagcatcaa
     1921 gcaaaatatt tttgaagact cttctaatgt gatgagattg gaggactctg ttcagaatat
     1981 atgagttcat atttggacac atggcaatct gaaataactt ctggggaaaa caaacattga
     2041 cagcaaaaga gaatttccag ctctataatt tgtaaaattc cctttctgtg aaacattttc
     2101 tttggttatc taaataaagc atttttgtct gacaaaatta
//
