LOCUS       NM_001382322            1086 bp    mRNA    linear   ROD 18-AUG-2023
DEFINITION  Mus musculus Myb/SANT DNA binding domain containing 5 like
            (Msantd5l), transcript variant 6, mRNA.
ACCESSION   NM_001382322 XM_006532584
VERSION     NM_001382322.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL645907.9.
            
            [WARNING] On Feb 5, 2025 this sequence was replaced by
            NM_001382322.2.
            
            On Apr 30, 2020 this sequence version replaced XM_006532584.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189676.46015.1,
                                           SRR5189679.54349.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-372               AL645907.9         61537-61908         c
            373-678             AL645907.9         53263-53568         c
            679-1086            AL645907.9         52549-52956         c
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 31.02 cM"
     gene            1..1086
                     /gene="Msantd5l"
                     /gene_synonym="4930503F14"
                     /note="Myb/SANT DNA binding domain containing 5 like"
                     /db_xref="GeneID:193286"
                     /db_xref="MGI:MGI:3039622"
     exon            1..372
                     /gene="Msantd5l"
                     /gene_synonym="4930503F14"
                     /inference="alignment:Splign:2.1.0"
     CDS             348..938
                     /gene="Msantd5l"
                     /gene_synonym="4930503F14"
                     /note="isoform 3 is encoded by transcript variant 6"
                     /codon_start=1
                     /product="uncharacterized protein LOC193286 isoform 3"
                     /protein_id="NP_001369251.1"
                     /db_xref="GeneID:193286"
                     /db_xref="MGI:MGI:3039622"
                     /translation="MPLKTSVAGSTGSSWTDSEIRVFLLEWEVVEQEMGHPGRKIHKK
                     TRALCRRLYQQGLKKSWESCFDLLLSLRDLHRTLCNERPGIEPLFSPYAEALYRILGS
                     SPQGSHVPGPLDDGAGNPPLSVYPQTPRNQPWDYGVAVPSAQLQGNALPMMSQEDSLF
                     PRGEHWNPNHSMSAPNLLPDFAPGDPSFQQPWPTAE"
     exon            373..678
                     /gene="Msantd5l"
                     /gene_synonym="4930503F14"
                     /inference="alignment:Splign:2.1.0"
     exon            679..1086
                     /gene="Msantd5l"
                     /gene_synonym="4930503F14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaggcgcgg gtaggacgag gttctgtccg cttgtcaggc tgaggttctt tctgttctta
       61 ggtgaacctg gaagcccgcc ttaagtctgc ggcgcgcgtc gggctctcga agagttttgc
      121 tgggcgtggc cacgctgggt agggccaacc tctgaccttt tcccatcagc ttaaagtggg
      181 aagctcatcg cactccatct accagtcgcc cctcaacctc agctccaggt agagccacca
      241 gagcgcagag tccccgaatg ctcccagcta gggcagctca gtgaccagga tatggctgtc
      301 acctggcgct tccgctctaa actggatttg gagaagttta cctgaatatg cctctaaaaa
      361 caagcgtagc aggttctacc ggaagctcat ggactgactc tgagatcagg gtcttcctgc
      421 tggagtggga agtagttgaa caggaaatgg gccacccggg caggaagatc cacaagaaga
      481 ccagggctct ttgcaggcgc ctttaccagc agggcctgaa gaagagctgg gaaagctgtt
      541 tcgacctact gctgagcctg cgagatctgc acaggactct ctgtaatgaa agaccaggga
      601 ttgaaccctt gttttctcct tatgctgagg ccctgtacag gatcctgggc tccagtcccc
      661 agggaagcca tgtcccaggt cctctcgatg atggggctgg taaccctcca ctttctgtgt
      721 accctcaaac tcccaggaac cagccttggg attatggcgt cgctgttcct tctgcacagc
      781 ttcaagggaa cgcactgcca atgatgtcac aggaggattc cctgtttcca agaggggagc
      841 actggaaccc caaccattca atgtcagctc caaacttact tcctgacttt gccccaggag
      901 accctagctt ccagcaaccg tggcccaccg cggaataaca ccctgatact caatgaagac
      961 aggtggcctt tctttgttta ttttctgaaa aacctgggac tgtgaaacct tgtgggtgtg
     1021 ggcatctttc tctaccccat aaggaaaaaa atgtggagtt aaataaaggt ccttatagag
     1081 actctc
//
